RNA–Protein interactions for RNA: YNL289W

PCL1, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL1, Length 840 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL1	YNL289W	ATG21	Q02887	496 aa		5.05	□□□□□ -1.6
PCL1	YNL289W	GTB1	Q04924	702 aa		5.05	□□□□□ -1.6
PCL1	YNL289W	PET122	P10355	254 aa		5.04	□□□□□ -1.6
PCL1	YNL289W	MSH1	P25846	959 aa		5.04	□□□□□ -1.6
PCL1	YNL289W	MAL33	P38157	468 aa		5.04	□□□□□ -1.6
PCL1	YNL289W	PIL1	P53252	339 aa	Known RBP	5.04	□□□□□ -1.6
PCL1	YNL289W	PGA2	P53903	129 aa		5.04	□□□□□ -1.6
PCL1	YNL289W	PSK2	Q08217	1101 aa		5.04	□□□□□ -1.6
PCL1	YNL289W	RRP6	Q12149	733 aa	Known RBP	5.04	□□□□□ -1.6
PCL1	YNL289W	RTP1	Q12751	981 aa		5.04	□□□□□ -1.6
PCL1	YNL289W	TY1B-A	O13527	1196 aa	Known RBP	5.03	□□□□□ -1.6
PCL1	YNL289W	YCP4	P25349	247 aa	Known RBP	5.03	□□□□□ -1.6
PCL1	YNL289W	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
PCL1	YNL289W	SPC97	P38863	823 aa		5.03	□□□□□ -1.6
PCL1	YNL289W	TVP23	P38962	199 aa		5.03	□□□□□ -1.6
PCL1	YNL289W	YJL107C	P42947	387 aa		5.03	□□□□□ -1.6
PCL1	YNL289W	ORC5	P50874	479 aa		5.03	□□□□□ -1.6
PCL1	YNL289W	YLH47	Q06493	454 aa		5.03	□□□□□ -1.6
PCL1	YNL289W	CEX1	Q12453	761 aa		5.03	□□□□□ -1.6
PCL1	YNL289W	MIS1	P09440	975 aa	Known RBP	5.02	□□□□□ -1.61
PCL1	YNL289W	CLN3	P13365	580 aa		5.02	□□□□□ -1.61
PCL1	YNL289W	ALG1	P16661	449 aa		5.02	□□□□□ -1.61
PCL1	YNL289W	TVP38	P36164	337 aa		5.02	□□□□□ -1.61
PCL1	YNL289W	PUG1	P40100	303 aa		5.02	□□□□□ -1.61
PCL1	YNL289W	FIS1	P40515	155 aa		5.02	□□□□□ -1.61
PCL1	YNL289W	SGM1	P47166	707 aa		5.02	□□□□□ -1.61
PCL1	YNL289W	AZR1	P50080	613 aa		5.02	□□□□□ -1.61
PCL1	YNL289W	CSM3	Q04659	317 aa		5.02	□□□□□ -1.61
PCL1	YNL289W	TIP41	Q12199	356 aa		5.02	□□□□□ -1.61
PCL1	YNL289W	HIS4	P00815	799 aa	Known RBP	5.01	□□□□□ -1.61
PCL1	YNL289W	FRS2	P15625	503 aa	Known RBP	5.01	□□□□□ -1.61
PCL1	YNL289W	AIM17	P23180	465 aa	Known RBP	5.01	□□□□□ -1.61
PCL1	YNL289W	SIP3	P38717	1229 aa		5.01	□□□□□ -1.61
PCL1	YNL289W	ARN1	P38731	627 aa		5.01	□□□□□ -1.61
PCL1	YNL289W	FSH1	P38777	243 aa	Known RBP	5.01	□□□□□ -1.61
PCL1	YNL289W	DJP1	P40564	432 aa		5.01	□□□□□ -1.61
PCL1	YNL289W	UBX6	P47049	396 aa		5.01	□□□□□ -1.61
PCL1	YNL289W	MSY1	P48527	492 aa		5.01	□□□□□ -1.61
PCL1	YNL289W	ZPR1	P53303	486 aa	Known RBP	5.01	□□□□□ -1.61
PCL1	YNL289W	CBK1	P53894	756 aa		5.01	□□□□□ -1.61
PCL1	YNL289W	ARK1	P53974	638 aa		5.01	□□□□□ -1.61
PCL1	YNL289W	YDR109C	Q04585	715 aa		5.01	□□□□□ -1.61
PCL1	YNL289W	STP3	Q05937	343 aa		5.01	□□□□□ -1.61
PCL1	YNL289W	MMR1	Q06324	491 aa		5.01	□□□□□ -1.61
PCL1	YNL289W	YDL057W	Q07379	328 aa		5.01	□□□□□ -1.61
PCL1	YNL289W	PSR2	Q07949	397 aa		5.01	□□□□□ -1.61
PCL1	YNL289W	NBL1	Q3E7Y6	73 aa		5.01	□□□□□ -1.61
PCL1	YNL289W	PGI1	P12709	554 aa	Known RBP	5	□□□□□ -1.61
PCL1	YNL289W	SNA3	P14359	133 aa		5	□□□□□ -1.61
PCL1	YNL289W	CNA1	P23287	553 aa		5	□□□□□ -1.61
PCL1	YNL289W	HMF1	P40037	129 aa	Known RBP	5	□□□□□ -1.61
PCL1	YNL289W	RPT2	P40327	437 aa	Known RBP	5	□□□□□ -1.61
PCL1	YNL289W	MTG1	Q03151	367 aa	Predicted RBP	5	□□□□□ -1.61
PCL1	YNL289W	RRI1	Q12468	440 aa		5	□□□□□ -1.61
PCL1	YNL289W	SMC6	Q12749	1114 aa		5	□□□□□ -1.61
PCL1	YNL289W	YML003W	P0CF16	290 aa		4.99	□□□□□ -1.61
PCL1	YNL289W	RFA2	P26754	273 aa	Known RBP	4.99	□□□□□ -1.61
PCL1	YNL289W	GND1	P38720	489 aa	Known RBP	4.99	□□□□□ -1.61
PCL1	YNL289W	ZAP1	P47043	880 aa		4.99	□□□□□ -1.61
PCL1	YNL289W	VTC3	Q02725	835 aa		4.99	□□□□□ -1.61
PCL1	YNL289W	VMS1	Q04311	632 aa	Known RBP	4.99	□□□□□ -1.61
PCL1	YNL289W	MRPL1	Q04599	285 aa		4.99	□□□□□ -1.61
PCL1	YNL289W	COQ9	Q05779	260 aa		4.99	□□□□□ -1.61
PCL1	YNL289W	YLR422W	Q06409	1932 aa		4.98	□□□□□ -1.61
PCL1	YNL289W	ADE4	P04046	510 aa	Known RBP	4.98	□□□□□ -1.61
PCL1	YNL289W	APA1	P16550	321 aa	Known RBP	4.98	□□□□□ -1.61
PCL1	YNL289W	NCP1	P16603	691 aa	Known RBP	4.98	□□□□□ -1.61
PCL1	YNL289W	ISY1	P21374	235 aa	Predicted RBP	4.98	□□□□□ -1.61
PCL1	YNL289W	UBC1	P21734	215 aa	Known RBP	4.98	□□□□□ -1.61
PCL1	YNL289W	CLB4	P24871	460 aa		4.98	□□□□□ -1.61
PCL1	YNL289W	YSP3	P25036	478 aa		4.98	□□□□□ -1.61
PCL1	YNL289W	DRE2	P36152	348 aa		4.98	□□□□□ -1.61
PCL1	YNL289W	GEX2	P36173	615 aa		4.98	□□□□□ -1.61
PCL1	YNL289W	ERR3	P42222	437 aa		4.98	□□□□□ -1.61
PCL1	YNL289W	NCS2	P53923	493 aa	Predicted RBP	4.98	□□□□□ -1.61
PCL1	YNL289W	YVH1	Q02256	364 aa	Known RBP	4.98	□□□□□ -1.61
PCL1	YNL289W	TRS130	Q03660	1102 aa		4.98	□□□□□ -1.61
PCL1	YNL289W	CIA1	Q05583	330 aa		4.98	□□□□□ -1.61
PCL1	YNL289W	FUS2	Q05670	677 aa		4.98	□□□□□ -1.61
PCL1	YNL289W	PDR8	Q06149	701 aa		4.98	□□□□□ -1.61
PCL1	YNL289W	AHC1	Q12433	566 aa		4.98	□□□□□ -1.61
PCL1	YNL289W	YDR034W-B	Q6Q5X2	51 aa		4.98	□□□□□ -1.61
PCL1	YNL289W	LAA1	P39526	2014 aa		4.97	□□□□□ -1.61
PCL1	YNL289W	CDC15	P27636	974 aa		4.97	□□□□□ -1.61
PCL1	YNL289W	MSS51	P32335	436 aa		4.97	□□□□□ -1.61
PCL1	YNL289W	VPS41	P38959	992 aa		4.97	□□□□□ -1.61
PCL1	YNL289W	PHM8	P40025	321 aa		4.97	□□□□□ -1.61
PCL1	YNL289W	TPA1	P40032	644 aa	Known RBP	4.97	□□□□□ -1.61
PCL1	YNL289W	LYS20	P48570	428 aa	Known RBP	4.97	□□□□□ -1.61
PCL1	YNL289W	CUE3	P53137	624 aa	Known RBP	4.97	□□□□□ -1.61
PCL1	YNL289W	TOF1	P53840	1238 aa		4.97	□□□□□ -1.61
PCL1	YNL289W	EAF7	P53911	425 aa	Known RBP	4.97	□□□□□ -1.61
PCL1	YNL289W	VAM6	Q07468	1049 aa		4.97	□□□□□ -1.61
PCL1	YNL289W	ATX2	Q12067	313 aa		4.97	□□□□□ -1.61
PCL1	YNL289W	BAG7	Q12128	409 aa		4.97	□□□□□ -1.61
PCL1	YNL289W	COX4	P04037	155 aa		4.96	□□□□□ -1.62
PCL1	YNL289W	RPL4A	P10664	362 aa	Known RBP	4.96	□□□□□ -1.62
PCL1	YNL289W	TCP1	P12612	559 aa	Known RBP	4.96	□□□□□ -1.62
PCL1	YNL289W	LRE1	P25579	583 aa	Known RBP	4.96	□□□□□ -1.62
PCL1	YNL289W	RME1	P32338	300 aa	Known RBP	4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms