RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	INO1	P11986	533 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	AMD1	P15274	810 aa	Known RBP	4.65	□□□□□ -1.67
ATM1	YMR301C	VPS34	P22543	875 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	YSR3	P23501	404 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	PHO84	P25297	587 aa	Known RBP	4.65	□□□□□ -1.67
ATM1	YMR301C	SRB4	P32569	687 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	PRP18	P33411	251 aa	Predicted RBP	4.65	□□□□□ -1.67
ATM1	YMR301C	TFC3	P34111	1160 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	YKL107W	P34251	309 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	ARA1	P38115	344 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	LDB7	P38210	180 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	SSU1	P41930	458 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	ERR3	P42222	437 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	TAH11	P47112	604 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	ARP4	P80428	489 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	ECM9	Q02202	377 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	MTG1	Q03151	367 aa	Predicted RBP	4.65	□□□□□ -1.67
ATM1	YMR301C	ENT2	Q05785	613 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	AIM41	Q12032	185 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	RMD5	Q12508	421 aa		4.65	□□□□□ -1.67
ATM1	YMR301C	CSF1	Q12150	2958 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	YBR056W-A	I2HB52	66 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	QCR6	P00127	147 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	ERG20	P08524	352 aa	Known RBP	4.64	□□□□□ -1.67
ATM1	YMR301C	PAP1	P29468	568 aa	Known RBP	4.64	□□□□□ -1.67
ATM1	YMR301C	CNS1	P33313	385 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	YKL077W	P36081	392 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	BET3	P36149	193 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	SMF1	P38925	575 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	MEF2	P39677	819 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	SEO1	P39709	593 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	YEL073C	P39974	107 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	SCC4	P40090	624 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	ALG8	P40351	577 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	DPH1	P40487	425 aa	Known RBP	4.64	□□□□□ -1.67
ATM1	YMR301C	GTS1	P40956	396 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	BOP3	P53958	396 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	RPN9	Q04062	393 aa	Known RBP	4.64	□□□□□ -1.67
ATM1	YMR301C	RSC2	Q06488	889 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	VAC14	Q06708	880 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	HOS1	Q12214	470 aa		4.64	□□□□□ -1.67
ATM1	YMR301C	IMA3	P0CW40	589 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	IMA4	P0CW41	589 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	YCL068C	P25593	260 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	BEM1	P29366	551 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	RIM11	P38615	370 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	MMS21	P38632	267 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	DSS1	P39112	969 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	ACO2	P39533	789 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	IME4	P41833	600 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	YFL012W	P43580	148 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	SKP1	P52286	194 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	CPR6	P53691	371 aa	Known RBP	4.63	□□□□□ -1.67
ATM1	YMR301C	NOP15	P53927	220 aa	Predicted RBP	4.63	□□□□□ -1.67
ATM1	YMR301C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
ATM1	YMR301C	OSH6	Q02201	448 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	IMA2	Q08295	589 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	YDR262W	Q12331	272 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	RPP1A	P05318	106 aa	Predicted RBP	4.63	□□□□□ -1.67
ATM1	YMR301C	NPR1	P22211	790 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	SMI1	P32566	505 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	MRPL37	P36532	105 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	MRP21	P38175	177 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	ATG14	P38270	344 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	ALK1	P43633	760 aa	Known RBP	4.63	□□□□□ -1.67
ATM1	YMR301C	ROT1	Q03691	256 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	HED1	Q03937	162 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	ECI1	Q05871	280 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	BSC6	Q08280	497 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	HRK1	Q08732	759 aa	Known RBP	4.63	□□□□□ -1.67
ATM1	YMR301C	YOR389W	Q08912	624 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	YPL278C	Q08990	100 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	ERP4	Q12450	207 aa		4.63	□□□□□ -1.67
ATM1	YMR301C	CMR1	Q12510	522 aa	Known RBP	4.63	□□□□□ -1.67
ATM1	YMR301C	HFA1	P32874	2273 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	FUM1	P08417	488 aa	Known RBP	4.62	□□□□□ -1.67
ATM1	YMR301C	NSP1	P14907	823 aa	Known RBP	4.62	□□□□□ -1.67
ATM1	YMR301C	PDC5	P16467	563 aa	Known RBP	4.62	□□□□□ -1.67
ATM1	YMR301C	RSC6	P25632	483 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	YCR099C	P25657	155 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	MGT1	P26188	188 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	CDC20	P26309	610 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
ATM1	YMR301C	CDC13	P32797	924 aa	Known RBP	4.62	□□□□□ -1.67
ATM1	YMR301C	STB6	P36085	766 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	UBS1	P38290	277 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	VHC1	P38329	1120 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	POP4	P38336	279 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	CAJ1	P39101	391 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	LRO1	P40345	661 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	PXA1	P41909	870 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	RPC17	P47076	161 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	APT1	P49435	187 aa	Known RBP	4.62	□□□□□ -1.67
ATM1	YMR301C	CSL4	P53859	292 aa	Predicted RBP	4.62	□□□□□ -1.67
ATM1	YMR301C	PET117	Q02771	107 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	CCE1	Q03702	353 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	VHS1	Q03785	461 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	GRX3	Q03835	250 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	NHX1	Q04121	633 aa		4.62	□□□□□ -1.67
ATM1	YMR301C	HFD1	Q04458	532 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 39 ms