RNA–Protein interactions for RNA: YMR214W

SCJ1, Transcript of One of several homologs of bacterial chaperone DnaJ, yeastyeast

Gene SCJ1, Length 1,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCJ1YMR214W HOG1P32485 435 aa14.94□□□□□ -0.02
SCJ1YMR214W SPT16P32558 1035 aaKnown RBP14.94□□□□□ -0.02
SCJ1YMR214W SQT1P35184 431 aa14.94□□□□□ -0.02
SCJ1YMR214W TAF14P35189 244 aa14.94□□□□□ -0.02
SCJ1YMR214W MAK5P38112 773 aaPredicted RBP14.94□□□□□ -0.02
SCJ1YMR214W TIM17P39515 158 aa14.94□□□□□ -0.02
SCJ1YMR214W YDR109CQ04585 715 aa14.94□□□□□ -0.02
SCJ1YMR214W YLR177WQ06251 628 aa14.94□□□□□ -0.02
SCJ1YMR214W NUS1Q12063 375 aa14.94□□□□□ -0.02
SCJ1YMR214W APC9Q12107 265 aa14.94□□□□□ -0.02
SCJ1YMR214W HRP1Q99383 534 aaKnown RBP14.94□□□□□ -0.02
SCJ1YMR214W STE2D6VTK4 431 aa14.93□□□□□ -0.02
SCJ1YMR214W TOM20P35180 183 aa14.93□□□□□ -0.02
SCJ1YMR214W GMH1P36125 273 aa14.93□□□□□ -0.02
SCJ1YMR214W DED81P38707 554 aaKnown RBP14.93□□□□□ -0.02
SCJ1YMR214W HST3P53687 447 aa14.93□□□□□ -0.02
SCJ1YMR214W CSN9Q03981 162 aa14.93□□□□□ -0.02
SCJ1YMR214W CDC10P25342 322 aaKnown RBP14.92□□□□□ -0.02
SCJ1YMR214W GUT2P32191 649 aa14.92□□□□□ -0.02
SCJ1YMR214W EMC3P36039 253 aa14.92□□□□□ -0.02
SCJ1YMR214W RIM2P38127 377 aa14.92□□□□□ -0.02
SCJ1YMR214W YHR182WP38870 785 aa14.92□□□□□ -0.02
SCJ1YMR214W ALG8P40351 577 aa14.92□□□□□ -0.02
SCJ1YMR214W FRE4P53746 719 aa14.92□□□□□ -0.02
SCJ1YMR214W ARP4P80428 489 aa14.92□□□□□ -0.02
SCJ1YMR214W UPC2Q12151 913 aa14.92□□□□□ -0.02
SCJ1YMR214W FRT1Q99332 602 aa14.92□□□□□ -0.02
SCJ1YMR214W MEC1P38111 2368 aa14.92□□□□□ -0.02
SCJ1YMR214W OXP1P28273 1286 aa14.91□□□□□ -0.02
SCJ1YMR214W CAB3P36076 571 aa14.91□□□□□ -0.02
SCJ1YMR214W ACO2P39533 789 aa14.91□□□□□ -0.02
SCJ1YMR214W MRX1P40050 688 aa14.91□□□□□ -0.02
SCJ1YMR214W SEC28P40509 296 aaKnown RBP14.91□□□□□ -0.02
SCJ1YMR214W SSU1P41930 458 aa14.91□□□□□ -0.02
SCJ1YMR214W FAR3P46671 204 aa14.91□□□□□ -0.02
SCJ1YMR214W TY4A-JP47023 414 aa14.91□□□□□ -0.02
SCJ1YMR214W RCF2P53721 224 aa14.91□□□□□ -0.02
SCJ1YMR214W SHE9Q04172 456 aa14.91□□□□□ -0.02
SCJ1YMR214W CRN1Q06440 651 aa14.91□□□□□ -0.02
SCJ1YMR214W GUP2Q08929 609 aa14.91□□□□□ -0.02
SCJ1YMR214W MRH1Q12117 320 aaPredicted RBP14.91□□□□□ -0.02
SCJ1YMR214W BAS1P22035 811 aa14.9□□□□□ -0.02
SCJ1YMR214W RNQ1P25367 405 aa14.9□□□□□ -0.02
SCJ1YMR214W RRN3P36070 627 aa14.9□□□□□ -0.02
SCJ1YMR214W YSW1P38280 609 aa14.9□□□□□ -0.02
SCJ1YMR214W PCL5P38794 229 aa14.9□□□□□ -0.02
SCJ1YMR214W HAT2P39984 401 aa14.9□□□□□ -0.02
SCJ1YMR214W IRR1P40541 1150 aa14.9□□□□□ -0.02
SCJ1YMR214W SPP2Q02521 185 aa14.9□□□□□ -0.02
SCJ1YMR214W RCO1Q04779 684 aa14.9□□□□□ -0.02
SCJ1YMR214W VID22Q05934 901 aa14.9□□□□□ -0.02
SCJ1YMR214W SEC53P07283 254 aaKnown RBP14.89□□□□□ -0.03
SCJ1YMR214W CDC13P32797 924 aaKnown RBP14.89□□□□□ -0.03
SCJ1YMR214W DOM34P33309 386 aa14.89□□□□□ -0.03
SCJ1YMR214W GTS1P40956 396 aa14.89□□□□□ -0.03
SCJ1YMR214W RTS3P53289 263 aa14.89□□□□□ -0.03
SCJ1YMR214W YNL058CP53947 316 aa14.89□□□□□ -0.03
SCJ1YMR214W NUT2Q06213 157 aa14.89□□□□□ -0.03
SCJ1YMR214W YOL024WQ08172 172 aa14.89□□□□□ -0.03
SCJ1YMR214W HRK1Q08732 759 aaKnown RBP14.89□□□□□ -0.03
SCJ1YMR214W SMF3Q12078 473 aaPredicted RBP14.89□□□□□ -0.03
SCJ1YMR214W UBX3Q12229 455 aa14.89□□□□□ -0.03
SCJ1YMR214W RPL43AP0CX25 92 aaKnown RBP14.88□□□□□ -0.03
SCJ1YMR214W RPL43BP0CX26 92 aa14.88□□□□□ -0.03
SCJ1YMR214W ASK1P35734 292 aa14.88□□□□□ -0.03
SCJ1YMR214W SPG5P42933 373 aa14.88□□□□□ -0.03
SCJ1YMR214W MAD3P47074 515 aa14.88□□□□□ -0.03
SCJ1YMR214W AIF1P52923 378 aa14.88□□□□□ -0.03
SCJ1YMR214W TAF6P53040 516 aa14.88□□□□□ -0.03
SCJ1YMR214W IST1P53843 298 aaPredicted RBP14.88□□□□□ -0.03
SCJ1YMR214W BUD7Q08754 746 aa14.88□□□□□ -0.03
SCJ1YMR214W AI4P03878 556 aa14.87□□□□□ -0.03
SCJ1YMR214W HOP1P20050 605 aa14.87□□□□□ -0.03
SCJ1YMR214W TRX2P22803 104 aaKnown RBP14.87□□□□□ -0.03
SCJ1YMR214W PHO84P25297 587 aaKnown RBP14.87□□□□□ -0.03
SCJ1YMR214W LDB16P25587 256 aa14.87□□□□□ -0.03
SCJ1YMR214W NTH1P32356 751 aa14.87□□□□□ -0.03
SCJ1YMR214W MUP3P38734 546 aa14.87□□□□□ -0.03
SCJ1YMR214W BOL2P53082 120 aa14.87□□□□□ -0.03
SCJ1YMR214W OSH6Q02201 448 aa14.87□□□□□ -0.03
SCJ1YMR214W YMR155WQ03795 547 aa14.87□□□□□ -0.03
SCJ1YMR214W HPT1Q04178 221 aaKnown RBP14.87□□□□□ -0.03
SCJ1YMR214W SSL1Q04673 461 aaPredicted RBP14.87□□□□□ -0.03
SCJ1YMR214W TMA46Q12000 345 aaKnown RBP14.87□□□□□ -0.03
SCJ1YMR214W ICT1Q12385 394 aa14.87□□□□□ -0.03
SCJ1YMR214W RRP12Q12754 1228 aaKnown RBP14.87□□□□□ -0.03
SCJ1YMR214W SEM1O94742 89 aa14.86□□□□□ -0.03
SCJ1YMR214W VAC17P25591 423 aa14.86□□□□□ -0.03
SCJ1YMR214W MF(ALPHA)2P32435 120 aa14.86□□□□□ -0.03
SCJ1YMR214W HSM3P38348 480 aa14.86□□□□□ -0.03
SCJ1YMR214W DBP8P38719 431 aa14.86□□□□□ -0.03
SCJ1YMR214W CHS7P38843 316 aa14.86□□□□□ -0.03
SCJ1YMR214W LYS1P38998 373 aaRIP-Chip data14.86□□□□□ -0.03not detected
SCJ1YMR214W IME4P41833 600 aa14.86□□□□□ -0.03
SCJ1YMR214W CCE1Q03702 353 aa14.86□□□□□ -0.03
SCJ1YMR214W YPL272CQ08984 517 aa14.86□□□□□ -0.03
SCJ1YMR214W NOT5Q12514 560 aaPredicted RBP14.86□□□□□ -0.03
SCJ1YMR214W LRG1P35688 1017 aa14.85□□□□□ -0.03
SCJ1YMR214W VRP1P37370 817 aa14.85□□□□□ -0.03
SCJ1YMR214W LSM5P40089 93 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms