RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	NOT5	Q12514	560 aa	Predicted RBP	12.52	□□□□□ -0.41
LSM3	YLR438C-A	YAR066W	P0CX18	203 aa		12.51	□□□□□ -0.41
LSM3	YLR438C-A	YHR214W	P0CX19	203 aa		12.51	□□□□□ -0.41
LSM3	YLR438C-A	BAS1	P22035	811 aa		12.51	□□□□□ -0.41
LSM3	YLR438C-A	NPP1	P25353	742 aa		12.51	□□□□□ -0.41
LSM3	YLR438C-A	ATP11	P32453	318 aa		12.51	□□□□□ -0.41
LSM3	YLR438C-A	SLX5	P32828	619 aa	Known RBP	12.51	□□□□□ -0.41
LSM3	YLR438C-A	SRX1	P36077	127 aa		12.51	□□□□□ -0.41
LSM3	YLR438C-A	GIC1	P38785	314 aa		12.51	□□□□□ -0.41
LSM3	YLR438C-A	SPF1	P39986	1215 aa	Known RBP	12.51	□□□□□ -0.41
LSM3	YLR438C-A	YER034W	P40022	185 aa	Known RBP	12.51	□□□□□ -0.41
LSM3	YLR438C-A	MRX1	P40050	688 aa		12.51	□□□□□ -0.41
LSM3	YLR438C-A	TIF34	P40217	347 aa	Known RBP	12.51	□□□□□ -0.41
LSM3	YLR438C-A	COA1	P40452	197 aa		12.51	□□□□□ -0.41
LSM3	YLR438C-A	VMA13	P41807	478 aa	Known RBP	12.51	□□□□□ -0.41
LSM3	YLR438C-A	SHY1	P53266	389 aa		12.51	□□□□□ -0.41
LSM3	YLR438C-A	TRM12	Q04235	462 aa		12.51	□□□□□ -0.41
LSM3	YLR438C-A	AHA1	Q12449	350 aa	Known RBP	12.51	□□□□□ -0.41
LSM3	YLR438C-A	COX3	P00420	269 aa		12.5	□□□□□ -0.41
LSM3	YLR438C-A	SWI5	P08153	709 aa		12.5	□□□□□ -0.41
LSM3	YLR438C-A	NIP1	P32497	812 aa	Known RBP	12.5	□□□□□ -0.41
LSM3	YLR438C-A	TOA1	P32773	286 aa		12.5	□□□□□ -0.41
LSM3	YLR438C-A	GIM4	P40005	111 aa	Known RBP	12.5	□□□□□ -0.41
LSM3	YLR438C-A	GAT1	P43574	510 aa		12.5	□□□□□ -0.41
LSM3	YLR438C-A	SUB1	P54000	292 aa	Known RBP	12.5	□□□□□ -0.41
LSM3	YLR438C-A	RPN8	Q08723	338 aa	Known RBP	12.5	□□□□□ -0.41
LSM3	YLR438C-A	BEM2	P39960	2167 aa	Known RBP	12.5	□□□□□ -0.41
LSM3	YLR438C-A	CDC21	P06785	304 aa		12.49	□□□□□ -0.41
LSM3	YLR438C-A	VPS34	P22543	875 aa		12.49	□□□□□ -0.41
LSM3	YLR438C-A	SPR1	P32603	445 aa		12.49	□□□□□ -0.41
LSM3	YLR438C-A	SCS2	P40075	244 aa	Known RBP	12.49	□□□□□ -0.41
LSM3	YLR438C-A	DAN4	P47179	1161 aa		12.49	□□□□□ -0.41
LSM3	YLR438C-A	GTR2	P53290	341 aa		12.49	□□□□□ -0.41
LSM3	YLR438C-A	NOP19	P53317	196 aa	Predicted RBP	12.49	□□□□□ -0.41
LSM3	YLR438C-A	HST3	P53687	447 aa		12.49	□□□□□ -0.41
LSM3	YLR438C-A	HEL2	Q05580	639 aa	Known RBP	12.49	□□□□□ -0.41
LSM3	YLR438C-A	RIF2	Q06208	395 aa		12.49	□□□□□ -0.41
LSM3	YLR438C-A	MSB2	P32334	1306 aa		12.48	□□□□□ -0.41
LSM3	YLR438C-A	PHO5	P00635	467 aa		12.48	□□□□□ -0.41
LSM3	YLR438C-A	TUB1	P09733	447 aa	Known RBP	12.48	□□□□□ -0.41
LSM3	YLR438C-A	DEP1	P31385	405 aa		12.48	□□□□□ -0.41
LSM3	YLR438C-A	VRP1	P37370	817 aa		12.48	□□□□□ -0.41
LSM3	YLR438C-A	RIM11	P38615	370 aa		12.48	□□□□□ -0.41
LSM3	YLR438C-A	NPT1	P39683	429 aa	Known RBP	12.48	□□□□□ -0.41
LSM3	YLR438C-A	YEL073C	P39974	107 aa		12.48	□□□□□ -0.41
LSM3	YLR438C-A	LGE1	Q02796	332 aa	Known RBP	12.48	□□□□□ -0.41
LSM3	YLR438C-A	YPL109C	Q02981	657 aa		12.48	□□□□□ -0.41
LSM3	YLR438C-A	PLB3	Q08108	686 aa		12.48	□□□□□ -0.41
LSM3	YLR438C-A	YDR056C	Q12025	205 aa		12.48	□□□□□ -0.41
LSM3	YLR438C-A	MET8	P15807	274 aa		12.47	□□□□□ -0.41
LSM3	YLR438C-A	PRP4	P20053	465 aa	Known RBP	12.47	□□□□□ -0.41
LSM3	YLR438C-A	COX13	P32799	129 aa		12.47	□□□□□ -0.41
LSM3	YLR438C-A	CTP1	P38152	299 aa		12.47	□□□□□ -0.41
LSM3	YLR438C-A	MUM2	P38236	366 aa		12.47	□□□□□ -0.41
LSM3	YLR438C-A	TIS11	P47977	285 aa		12.47	□□□□□ -0.41
LSM3	YLR438C-A	MNN10	P50108	393 aa	Known RBP	12.47	□□□□□ -0.41
LSM3	YLR438C-A	YNL260C	P53846	198 aa		12.47	□□□□□ -0.41
LSM3	YLR438C-A	MFB1	Q04922	465 aa		12.47	□□□□□ -0.41
LSM3	YLR438C-A	YOL019W	Q08157	551 aa		12.47	□□□□□ -0.41
LSM3	YLR438C-A	RRP36	Q12481	300 aa	Predicted RBP	12.47	□□□□□ -0.41
LSM3	YLR438C-A	GUK1	P15454	187 aa	Known RBP	12.46	□□□□□ -0.41
LSM3	YLR438C-A	EXO70	P19658	623 aa		12.46	□□□□□ -0.41
LSM3	YLR438C-A	YSR3	P23501	404 aa		12.46	□□□□□ -0.41
LSM3	YLR438C-A	CRM1	P30822	1084 aa	Known RBP	12.46	□□□□□ -0.41
LSM3	YLR438C-A	SDH3	P33421	198 aa		12.46	□□□□□ -0.41
LSM3	YLR438C-A	ERP5	P38819	212 aa		12.46	□□□□□ -0.41
LSM3	YLR438C-A	MPS2	P53159	387 aa		12.46	□□□□□ -0.41
LSM3	YLR438C-A	YML131W	Q03102	365 aa		12.46	□□□□□ -0.41
LSM3	YLR438C-A	ATG34	Q12292	412 aa		12.46	□□□□□ -0.41
LSM3	YLR438C-A	SRN2	Q99176	213 aa		12.46	□□□□□ -0.41
LSM3	YLR438C-A	RED1	P14291	827 aa		12.45	□□□□□ -0.42
LSM3	YLR438C-A	CIN8	P27895	1000 aa		12.45	□□□□□ -0.42
LSM3	YLR438C-A	DEF1	P35732	738 aa	Known RBP	12.45	□□□□□ -0.42
LSM3	YLR438C-A	FRT2	P39734	528 aa		12.45	□□□□□ -0.42
LSM3	YLR438C-A	EMP65	P40085	556 aa		12.45	□□□□□ -0.42
LSM3	YLR438C-A	PFA3	P42836	336 aa		12.45	□□□□□ -0.42
LSM3	YLR438C-A	CUS2	P53830	285 aa	Predicted RBP	12.45	□□□□□ -0.42
LSM3	YLR438C-A	YFT2	Q06676	274 aa		12.45	□□□□□ -0.42
LSM3	YLR438C-A	RTT10	Q08924	1013 aa		12.45	□□□□□ -0.42
LSM3	YLR438C-A	PST1	Q12355	444 aa		12.45	□□□□□ -0.42
LSM3	YLR438C-A	BRR1	Q99177	341 aa	Predicted RBP	12.45	□□□□□ -0.42
LSM3	YLR438C-A	NHA1	Q99271	985 aa		12.45	□□□□□ -0.42
LSM3	YLR438C-A	UBA4	P38820	440 aa		12.44	□□□□□ -0.42
LSM3	YLR438C-A	ARB1	P40024	610 aa	Known RBP	12.44	□□□□□ -0.42
LSM3	YLR438C-A	MDM34	P53083	459 aa		12.44	□□□□□ -0.42
LSM3	YLR438C-A	YGR015C	P53208	328 aa		12.44	□□□□□ -0.42
LSM3	YLR438C-A	YNL010W	P53981	241 aa	Known RBP	12.44	□□□□□ -0.42
LSM3	YLR438C-A	REX2	P54964	269 aa	Known RBP	12.44	□□□□□ -0.42
LSM3	YLR438C-A	YDL121C	Q07541	149 aa		12.44	□□□□□ -0.42
LSM3	YLR438C-A	YLR049C	Q12110	428 aa		12.44	□□□□□ -0.42
LSM3	YLR438C-A	CAR1	P00812	333 aa	Known RBP	12.43	□□□□□ -0.42
LSM3	YLR438C-A	TRP3	P00937	484 aa		12.43	□□□□□ -0.42
LSM3	YLR438C-A	FUM1	P08417	488 aa	Known RBP	12.43	□□□□□ -0.42
LSM3	YLR438C-A	COS2	P0CX12	379 aa		12.43	□□□□□ -0.42
LSM3	YLR438C-A	COS3	P0CX13	379 aa		12.43	□□□□□ -0.42
LSM3	YLR438C-A	TFB1	P32776	642 aa		12.43	□□□□□ -0.42
LSM3	YLR438C-A	RPS1A	P33442	255 aa	Known RBP	12.43	□□□□□ -0.42
LSM3	YLR438C-A	YHR127W	P38833	243 aa	Known RBP	12.43	□□□□□ -0.42
LSM3	YLR438C-A	PFS1	P38872	237 aa		12.43	□□□□□ -0.42
LSM3	YLR438C-A	COS4	P43542	379 aa		12.43	□□□□□ -0.42

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms