RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C GPR1Q12361 961 aa11.42□□□□□ -0.58
YKR040CYKR040C STB3Q12427 513 aa11.42□□□□□ -0.58
YKR040CYKR040C CDC21P06785 304 aa11.41□□□□□ -0.58
YKR040CYKR040C MET8P15807 274 aa11.41□□□□□ -0.58
YKR040CYKR040C PHA2P32452 334 aa11.41□□□□□ -0.58
YKR040CYKR040C SPT16P32558 1035 aaKnown RBP11.41□□□□□ -0.58
YKR040CYKR040C ASK1P35734 292 aa11.41□□□□□ -0.58
YKR040CYKR040C MUD2P36084 527 aaKnown RBP11.41□□□□□ -0.58
YKR040CYKR040C NTR2P36118 322 aaPredicted RBP11.41□□□□□ -0.58
YKR040CYKR040C TRM7P38238 310 aaKnown RBP11.41□□□□□ -0.58
YKR040CYKR040C UBA4P38820 440 aa11.41□□□□□ -0.58
YKR040CYKR040C GCD14P46959 383 aaPredicted RBP11.41□□□□□ -0.58
YKR040CYKR040C MPS2P53159 387 aa11.41□□□□□ -0.58
YKR040CYKR040C MCD1Q12158 566 aa11.41□□□□□ -0.58
YKR040CYKR040C PST1Q12355 444 aa11.41□□□□□ -0.58
YKR040CYKR040C RSR1P13856 272 aa11.4□□□□□ -0.58
YKR040CYKR040C RNQ1P25367 405 aa11.4□□□□□ -0.58
YKR040CYKR040C AAD3P25612 363 aa11.4□□□□□ -0.58
YKR040CYKR040C DOM34P33309 386 aa11.4□□□□□ -0.58
YKR040CYKR040C YBR238CP38330 731 aaKnown RBP11.4□□□□□ -0.58
YKR040CYKR040C SAP1P39955 897 aaKnown RBP11.4□□□□□ -0.58
YKR040CYKR040C BNI4P53858 892 aa11.4□□□□□ -0.58
YKR040CYKR040C HRP1Q99383 534 aaKnown RBP11.4□□□□□ -0.58
YKR040CYKR040C CLN2P20438 545 aa11.39□□□□□ -0.59
YKR040CYKR040C CDC13P32797 924 aaKnown RBP11.39□□□□□ -0.59
YKR040CYKR040C YHR127WP38833 243 aaKnown RBP11.39□□□□□ -0.59
YKR040CYKR040C UME6P39001 836 aa11.39□□□□□ -0.59
YKR040CYKR040C TIS11P47977 285 aa11.39□□□□□ -0.59
YKR040CYKR040C RHO3Q00245 231 aaKnown RBP11.39□□□□□ -0.59
YKR040CYKR040C YMR155WQ03795 547 aa11.39□□□□□ -0.59
YKR040CYKR040C YDR056CQ12025 205 aa11.39□□□□□ -0.59
YKR040CYKR040C YDR262WQ12331 272 aa11.39□□□□□ -0.59
YKR040CYKR040C GAL4P04386 881 aa11.38□□□□□ -0.59
YKR040CYKR040C YCK2P23292 546 aaKnown RBP11.38□□□□□ -0.59
YKR040CYKR040C KIP2P28743 706 aa11.38□□□□□ -0.59
YKR040CYKR040C PET309P32522 965 aaPredicted RBP11.38□□□□□ -0.59
YKR040CYKR040C YKL100CP34248 587 aa11.38□□□□□ -0.59
YKR040CYKR040C OAF3P36023 863 aa11.38□□□□□ -0.59
YKR040CYKR040C YHR033WP38690 423 aa11.38□□□□□ -0.59
YKR040CYKR040C LEU5P38702 357 aa11.38□□□□□ -0.59
YKR040CYKR040C LYS1P38998 373 aaRIP-Chip data11.38□□□□□ -0.59not detected
YKR040CYKR040C MGS1P40151 587 aa11.38□□□□□ -0.59
YKR040CYKR040C AAT1Q01802 451 aa11.38□□□□□ -0.59
YKR040CYKR040C RNY1Q02933 434 aaKnown RBP11.38□□□□□ -0.59
YKR040CYKR040C CTK1Q03957 528 aaKnown RBP11.38□□□□□ -0.59
YKR040CYKR040C BCH1Q05029 724 aa11.38□□□□□ -0.59
YKR040CYKR040C SKM1Q12469 655 aa11.38□□□□□ -0.59
YKR040CYKR040C HEM2P05373 342 aa11.37□□□□□ -0.59
YKR040CYKR040C PRP16P15938 1071 aaPredicted RBP11.37□□□□□ -0.59
YKR040CYKR040C MGM101P32787 269 aaKnown RBP11.37□□□□□ -0.59
YKR040CYKR040C SKT5P34226 696 aa11.37□□□□□ -0.59
YKR040CYKR040C EMC3P36039 253 aa11.37□□□□□ -0.59
YKR040CYKR040C SOL2P37262 315 aa11.37□□□□□ -0.59
YKR040CYKR040C PHO89P38361 574 aa11.37□□□□□ -0.59
YKR040CYKR040C RIM11P38615 370 aa11.37□□□□□ -0.59
YKR040CYKR040C NPT1P39683 429 aaKnown RBP11.37□□□□□ -0.59
YKR040CYKR040C GCV1P48015 400 aa11.37□□□□□ -0.59
YKR040CYKR040C COS12P53053 380 aa11.37□□□□□ -0.59
YKR040CYKR040C SGF73P53165 657 aa11.37□□□□□ -0.59
YKR040CYKR040C YGR015CP53208 328 aa11.37□□□□□ -0.59
YKR040CYKR040C ARE2P53629 642 aaKnown RBP11.37□□□□□ -0.59
YKR040CYKR040C STP3Q05937 343 aa11.37□□□□□ -0.59
YKR040CYKR040C TDA5Q06417 326 aaKnown RBP11.37□□□□□ -0.59
YKR040CYKR040C VAM6Q07468 1049 aa11.37□□□□□ -0.59
YKR040CYKR040C SUL2Q12325 893 aa11.37□□□□□ -0.59
YKR040CYKR040C YPL247CQ12523 523 aa11.37□□□□□ -0.59
YKR040CYKR040C MEI5P32489 222 aa11.36□□□□□ -0.59
YKR040CYKR040C NUP120P35729 1037 aa11.36□□□□□ -0.59
YKR040CYKR040C DHH1P39517 506 aaKnown RBP11.36□□□□□ -0.59
YKR040CYKR040C LRO1P40345 661 aa11.36□□□□□ -0.59
YKR040CYKR040C YRB1P41920 201 aaKnown RBP11.36□□□□□ -0.59
YKR040CYKR040C LIA1P47120 325 aaKnown RBP11.36□□□□□ -0.59
YKR040CYKR040C YJR149WP47177 404 aa11.36□□□□□ -0.59
YKR040CYKR040C IST1P53843 298 aaPredicted RBP11.36□□□□□ -0.59
YKR040CYKR040C YNL058CP53947 316 aa11.36□□□□□ -0.59
YKR040CYKR040C RRP12Q12754 1228 aaKnown RBP11.36□□□□□ -0.59
YKR040CYKR040C YCR090CP25654 182 aaKnown RBP11.35□□□□□ -0.59
YKR040CYKR040C SDH3P33421 198 aa11.35□□□□□ -0.59
YKR040CYKR040C WBP1P33767 430 aaKnown RBP11.35□□□□□ -0.59
YKR040CYKR040C INM1P38710 295 aa11.35□□□□□ -0.59
YKR040CYKR040C LIN1P38852 340 aaPredicted RBP11.35□□□□□ -0.59
YKR040CYKR040C YER034WP40022 185 aaKnown RBP11.35□□□□□ -0.59
YKR040CYKR040C CFD1P40558 293 aa11.35□□□□□ -0.59
YKR040CYKR040C AXL1P40851 1208 aa11.35□□□□□ -0.59
YKR040CYKR040C YFR020WP43600 232 aa11.35□□□□□ -0.59
YKR040CYKR040C MDM34P53083 459 aa11.35□□□□□ -0.59
YKR040CYKR040C RMI1Q02685 241 aa11.35□□□□□ -0.59
YKR040CYKR040C YMR034CQ05131 434 aaPredicted RBP11.35□□□□□ -0.59
YKR040CYKR040C TEL1P38110 2787 aa11.35□□□□□ -0.59
YKR040CYKR040C TEC1P18412 486 aa11.34□□□□□ -0.59
YKR040CYKR040C NRP1P32770 719 aaKnown RBP RIP-Chip data11.34□□□□□ -0.59not detected
YKR040CYKR040C SKN1P33336 771 aa11.34□□□□□ -0.59
YKR040CYKR040C OAF1P39720 1047 aaPredicted RBP11.34□□□□□ -0.59
YKR040CYKR040C EFM5P53200 248 aaKnown RBP11.34□□□□□ -0.59
YKR040CYKR040C SHY1P53266 389 aa11.34□□□□□ -0.59
YKR040CYKR040C RTS3P53289 263 aa11.34□□□□□ -0.59
YKR040CYKR040C SFH1Q06168 426 aa11.34□□□□□ -0.59
YKR040CYKR040C SEC10Q06245 871 aa11.34□□□□□ -0.59
YKR040CYKR040C APC9Q12107 265 aa11.34□□□□□ -0.59
YKR040CYKR040C RUD3Q12234 484 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms