RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W EHT1P38295 451 aa2.33□□□□□ -2.04
NUP100YKL068W PHO12P38693 467 aa2.33□□□□□ -2.04
NUP100YKL068W YPT35P38815 214 aaKnown RBP2.33□□□□□ -2.04
NUP100YKL068W SAK1P38990 1142 aa2.33□□□□□ -2.04
NUP100YKL068W SLZ1P40167 298 aa2.33□□□□□ -2.04
NUP100YKL068W YJL070CP40361 888 aa2.33□□□□□ -2.04
NUP100YKL068W PXA1P41909 870 aa2.33□□□□□ -2.04
NUP100YKL068W YFR018CP43599 363 aa2.33□□□□□ -2.04
NUP100YKL068W MLC1P53141 149 aa2.33□□□□□ -2.04
NUP100YKL068W YGL036WP53185 909 aaPredicted RBP2.33□□□□□ -2.04
NUP100YKL068W DCP2P53550 970 aaKnown RBP2.33□□□□□ -2.04
NUP100YKL068W PNG1Q02890 363 aa2.33□□□□□ -2.04
NUP100YKL068W TPP1Q03796 238 aa2.33□□□□□ -2.04
NUP100YKL068W HBT1Q07653 1046 aaKnown RBP2.33□□□□□ -2.04
NUP100YKL068W NUS1Q12063 375 aa2.33□□□□□ -2.04
NUP100YKL068W RPL6BP05739 176 aaKnown RBP2.32□□□□□ -2.04
NUP100YKL068W DFR1P07807 211 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04 RIP-Chip
NUP100YKL068W TAL1P15019 335 aaKnown RBP2.32□□□□□ -2.04
NUP100YKL068W PRE4P30657 266 aa2.32□□□□□ -2.04
NUP100YKL068W PET127P32606 800 aa2.32□□□□□ -2.04
NUP100YKL068W COT1P32798 439 aa2.32□□□□□ -2.04
NUP100YKL068W MRE11P32829 692 aa2.32□□□□□ -2.04
NUP100YKL068W PXL1P36166 706 aa2.32□□□□□ -2.04
NUP100YKL068W YBL028CP38202 106 aa2.32□□□□□ -2.04
NUP100YKL068W NTC20P38302 140 aaPredicted RBP2.32□□□□□ -2.04
NUP100YKL068W RRM3P38766 723 aa2.32□□□□□ -2.04
NUP100YKL068W AKR1P39010 764 aa2.32□□□□□ -2.04
NUP100YKL068W GIP4P39732 760 aa2.32□□□□□ -2.04
NUP100YKL068W SER3P40054 469 aa2.32□□□□□ -2.04
NUP100YKL068W NET1P47035 1189 aa2.32□□□□□ -2.04
NUP100YKL068W PET130P47065 347 aa2.32□□□□□ -2.04
NUP100YKL068W LIA1P47120 325 aaKnown RBP2.32□□□□□ -2.04
NUP100YKL068W YDL183CP48569 320 aa2.32□□□□□ -2.04
NUP100YKL068W COX18P53239 316 aa2.32□□□□□ -2.04
NUP100YKL068W YNL143CP53908 130 aa2.32□□□□□ -2.04
NUP100YKL068W RPL6AQ02326 176 aaKnown RBP2.32□□□□□ -2.04
NUP100YKL068W EGD1Q02642 157 aaKnown RBP2.32□□□□□ -2.04
NUP100YKL068W KAP120Q02932 1032 aa2.32□□□□□ -2.04
NUP100YKL068W MUB1Q03162 620 aa2.32□□□□□ -2.04
NUP100YKL068W RBS1Q05672 457 aaKnown RBP2.32□□□□□ -2.04
NUP100YKL068W VPS38Q05919 439 aa2.32□□□□□ -2.04
NUP100YKL068W AIM6Q07716 390 aa2.32□□□□□ -2.04
NUP100YKL068W UAF30Q08747 228 aa2.32□□□□□ -2.04
NUP100YKL068W GPR1Q12361 961 aa2.32□□□□□ -2.04
NUP100YKL068W GIS3Q12418 502 aa2.32□□□□□ -2.04
NUP100YKL068W STE2D6VTK4 431 aa2.32□□□□□ -2.04
NUP100YKL068W STE3P06783 470 aa2.32□□□□□ -2.04
NUP100YKL068W ASF2P32448 525 aaPredicted RBP2.32□□□□□ -2.04
NUP100YKL068W GCD7P32502 381 aaPredicted RBP2.32□□□□□ -2.04
NUP100YKL068W TPO5P36029 618 aa2.32□□□□□ -2.04
NUP100YKL068W TDP1P38319 544 aa2.32□□□□□ -2.04
NUP100YKL068W CCT6P39079 546 aa2.32□□□□□ -2.04
NUP100YKL068W YMR124WP39523 943 aaKnown RBP2.32□□□□□ -2.04
NUP100YKL068W ELO3P40319 345 aa2.32□□□□□ -2.04
NUP100YKL068W GTS1P40956 396 aa2.32□□□□□ -2.04
NUP100YKL068W DLD2P46681 530 aaKnown RBP2.32□□□□□ -2.04
NUP100YKL068W JJJ3P47138 172 aa2.32□□□□□ -2.04
NUP100YKL068W CTR1P49573 406 aa2.32□□□□□ -2.04
NUP100YKL068W YGR054WP53235 642 aaKnown RBP2.32□□□□□ -2.04
NUP100YKL068W YGR066CP53242 292 aa2.32□□□□□ -2.04
NUP100YKL068W RCM1P53972 490 aa2.32□□□□□ -2.04
NUP100YKL068W TRM44Q02648 567 aaKnown RBP2.32□□□□□ -2.04
NUP100YKL068W SNZ1Q03148 297 aa2.32□□□□□ -2.04
NUP100YKL068W PPN1Q04119 674 aa2.32□□□□□ -2.04
NUP100YKL068W MSC3Q05812 728 aa2.32□□□□□ -2.04
NUP100YKL068W ADE13Q05911 482 aaKnown RBP2.32□□□□□ -2.04
NUP100YKL068W RBD2Q12270 262 aa2.32□□□□□ -2.04
NUP100YKL068W LDB17Q12342 491 aa2.32□□□□□ -2.04
NUP100YKL068W ERG27Q12452 347 aaKnown RBP2.32□□□□□ -2.04
NUP100YKL068W TFB5Q3E7C1 72 aaPredicted RBP2.32□□□□□ -2.04
NUP100YKL068W VPS63O13549 108 aa2.31□□□□□ -2.04
NUP100YKL068W PRD1P25375 712 aa2.31□□□□□ -2.04
NUP100YKL068W YPT7P32939 208 aa2.31□□□□□ -2.04
NUP100YKL068W NNK1P36003 928 aa2.31□□□□□ -2.04
NUP100YKL068W TAT1P38085 619 aa2.31□□□□□ -2.04
NUP100YKL068W SLM4P38247 162 aa2.31□□□□□ -2.04
NUP100YKL068W PZF1P39933 429 aa2.31□□□□□ -2.04
NUP100YKL068W YTA12P40341 825 aa2.31□□□□□ -2.04
NUP100YKL068W IME4P41833 600 aa2.31□□□□□ -2.04
NUP100YKL068W ASE1P50275 885 aa2.31□□□□□ -2.04
NUP100YKL068W INP52P50942 1183 aa2.31□□□□□ -2.04
NUP100YKL068W PNC1P53184 216 aaKnown RBP2.31□□□□□ -2.04
NUP100YKL068W MPP6P53725 186 aaPredicted RBP2.31□□□□□ -2.04
NUP100YKL068W YNL050CP53952 270 aa2.31□□□□□ -2.04
NUP100YKL068W SVS1Q12254 260 aa2.31□□□□□ -2.04
NUP100YKL068W RAD61Q99359 647 aa2.31□□□□□ -2.04
NUP100YKL068W KRS1P15180 591 aaKnown RBP2.31□□□□□ -2.04
NUP100YKL068W TUP1P16649 713 aa2.31□□□□□ -2.04
NUP100YKL068W HPR1P17629 752 aaKnown RBP2.31□□□□□ -2.04
NUP100YKL068W VPS3P23643 1011 aa2.31□□□□□ -2.04
NUP100YKL068W RPC82P32349 654 aa2.31□□□□□ -2.04
NUP100YKL068W NTH1P32356 751 aa2.31□□□□□ -2.04
NUP100YKL068W HXT3P32466 567 aaKnown RBP2.31□□□□□ -2.04
NUP100YKL068W YME1P32795 747 aa2.31□□□□□ -2.04
NUP100YKL068W CMC1P36064 111 aa2.31□□□□□ -2.04
NUP100YKL068W RPC37P36121 282 aa2.31□□□□□ -2.04
NUP100YKL068W LIN1P38852 340 aaPredicted RBP2.31□□□□□ -2.04
NUP100YKL068W CRG1P38892 291 aaRIP-Chip data2.31□□□□□ -2.04not detected
NUP100YKL068W SEC24P40482 926 aaKnown RBP2.31□□□□□ -2.04
NUP100YKL068W ELP2P42935 788 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms