RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W NAT1P12945 854 aaKnown RBP5.76□□□□□ -1.49
PRP40YKL012W TKL1P23254 680 aaKnown RBP5.76□□□□□ -1.49
PRP40YKL012W IMD2P38697 523 aaKnown RBP5.76□□□□□ -1.49
PRP40YKL012W PAC2P39937 518 aa5.76□□□□□ -1.49
PRP40YKL012W ZIM17P42844 174 aa5.76□□□□□ -1.49
PRP40YKL012W IMD3P50095 523 aaKnown RBP5.76□□□□□ -1.49
PRP40YKL012W ERG26P53199 349 aaKnown RBP5.76□□□□□ -1.49
PRP40YKL012W RBS1Q05672 457 aaKnown RBP5.76□□□□□ -1.49
PRP40YKL012W YLR049CQ12110 428 aa5.76□□□□□ -1.49
PRP40YKL012W MNE1P24720 663 aa5.75□□□□□ -1.49
PRP40YKL012W SAC1P32368 623 aaKnown RBP5.75□□□□□ -1.49
PRP40YKL012W MDL1P33310 695 aa5.75□□□□□ -1.49
PRP40YKL012W MSR1P38714 643 aa5.75□□□□□ -1.49
PRP40YKL012W YIL166CP40445 542 aa5.75□□□□□ -1.49
PRP40YKL012W PDH1Q12428 516 aaKnown RBP5.75□□□□□ -1.49
PRP40YKL012W AFI1Q99222 893 aa5.75□□□□□ -1.49
PRP40YKL012W INO80P53115 1489 aa5.75□□□□□ -1.49
PRP40YKL012W MDH1P17505 334 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
PRP40YKL012W MSS51P32335 436 aa5.75□□□□□ -1.49
PRP40YKL012W YME1P32795 747 aa5.75□□□□□ -1.49
PRP40YKL012W RXT2P38255 430 aa5.75□□□□□ -1.49
PRP40YKL012W BUD27P43573 796 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
PRP40YKL012W PAR32Q12515 295 aaKnown RBP5.75□□□□□ -1.49
PRP40YKL012W YDL007C-AQ2V2Q0 85 aa5.75□□□□□ -1.49
PRP40YKL012W CPR2P23285 205 aa5.74□□□□□ -1.49
PRP40YKL012W BUD5P25300 642 aaPredicted RBP5.74□□□□□ -1.49
PRP40YKL012W HXT3P32466 567 aaKnown RBP5.74□□□□□ -1.49
PRP40YKL012W YKL100CP34248 587 aa5.74□□□□□ -1.49
PRP40YKL012W CIN1P40987 1014 aa5.74□□□□□ -1.49
PRP40YKL012W VMA13P41807 478 aaKnown RBP5.74□□□□□ -1.49
PRP40YKL012W TCB2P48231 1178 aa5.74□□□□□ -1.49
PRP40YKL012W YGR016WP53209 190 aa5.74□□□□□ -1.49
PRP40YKL012W OAZ1Q02803 292 aa5.74□□□□□ -1.49
PRP40YKL012W MSC1Q03104 513 aa5.74□□□□□ -1.49
PRP40YKL012W EMI2Q04409 500 aaKnown RBP5.74□□□□□ -1.49
PRP40YKL012W SOV1Q04748 898 aa5.74□□□□□ -1.49
PRP40YKL012W IRC10Q08118 586 aa5.74□□□□□ -1.49
PRP40YKL012W YML133CQ03099 1374 aa5.73□□□□□ -1.49
PRP40YKL012W YLL067CQ07888 1374 aa5.73□□□□□ -1.49
PRP40YKL012W YLL066CQ99208 1374 aa5.73□□□□□ -1.49
PRP40YKL012W SSN2P38931 1420 aa5.73□□□□□ -1.49
PRP40YKL012W GPA1P08539 472 aa5.73□□□□□ -1.49
PRP40YKL012W RPL3P14126 387 aaKnown RBP5.73□□□□□ -1.49
PRP40YKL012W YCR006CP25350 157 aa5.73□□□□□ -1.49
PRP40YKL012W SNT1P25357 1226 aa5.73□□□□□ -1.49
PRP40YKL012W APD1P38281 316 aa5.73□□□□□ -1.49
PRP40YKL012W DBP8P38719 431 aa5.73□□□□□ -1.49
PRP40YKL012W LCB2P40970 561 aa5.73□□□□□ -1.49
PRP40YKL012W ORC5P50874 479 aa5.73□□□□□ -1.49
PRP40YKL012W APM1Q00776 475 aaPredicted RBP5.73□□□□□ -1.49
PRP40YKL012W KAP120Q02932 1032 aa5.73□□□□□ -1.49
PRP40YKL012W PDS5Q04264 1277 aa5.73□□□□□ -1.49
PRP40YKL012W FMP45Q07651 309 aa5.73□□□□□ -1.49
PRP40YKL012W RPS10AQ08745 105 aaPredicted RBP5.73□□□□□ -1.49
PRP40YKL012W YER145C-AA0A023PYF4 145 aa5.72□□□□□ -1.49
PRP40YKL012W CLB2P24869 491 aa5.72□□□□□ -1.49
PRP40YKL012W ERV1P27882 189 aa5.72□□□□□ -1.49
PRP40YKL012W TOA1P32773 286 aa5.72□□□□□ -1.49
PRP40YKL012W OCT1P35999 772 aa5.72□□□□□ -1.49
PRP40YKL012W ANS1P38832 159 aa5.72□□□□□ -1.49
PRP40YKL012W CAJ1P39101 391 aa5.72□□□□□ -1.49
PRP40YKL012W CIN4P39110 191 aa5.72□□□□□ -1.49
PRP40YKL012W GDI1P39958 451 aaKnown RBP5.72□□□□□ -1.49
PRP40YKL012W MNP1P53163 194 aaPredicted RBP5.72□□□□□ -1.49
PRP40YKL012W YTP1P53584 459 aa5.72□□□□□ -1.49
PRP40YKL012W SUT2Q12286 268 aa5.72□□□□□ -1.49
PRP40YKL012W SPT7P35177 1332 aa5.72□□□□□ -1.49
PRP40YKL012W SPO11P23179 398 aa5.72□□□□□ -1.49
PRP40YKL012W ELO2P25358 347 aa5.72□□□□□ -1.49
PRP40YKL012W DPH2P32461 534 aa5.72□□□□□ -1.49
PRP40YKL012W HCS1P34243 683 aa5.72□□□□□ -1.49
PRP40YKL012W PXL1P36166 706 aa5.72□□□□□ -1.49
PRP40YKL012W RPL32P38061 130 aaKnown RBP5.72□□□□□ -1.49
PRP40YKL012W CAK1P43568 368 aaPredicted RBP5.72□□□□□ -1.49
PRP40YKL012W RPS10BP46784 105 aaKnown RBP5.72□□□□□ -1.49
PRP40YKL012W GYL1Q04322 720 aa5.72□□□□□ -1.49
PRP40YKL012W TAP42Q04372 366 aa5.72□□□□□ -1.49
PRP40YKL012W COQ9Q05779 260 aa5.72□□□□□ -1.49
PRP40YKL012W ARG81P05085 880 aa5.71□□□□□ -1.5
PRP40YKL012W TFB1P32776 642 aa5.71□□□□□ -1.5
PRP40YKL012W MIA40P36046 403 aa5.71□□□□□ -1.5
PRP40YKL012W SEC28P40509 296 aaKnown RBP5.71□□□□□ -1.5
PRP40YKL012W YJL107CP42947 387 aa5.71□□□□□ -1.5
PRP40YKL012W FMP30Q02883 468 aa5.71□□□□□ -1.5
PRP40YKL012W PDR8Q06149 701 aa5.71□□□□□ -1.5
PRP40YKL012W PIG1Q06216 648 aa5.71□□□□□ -1.5
PRP40YKL012W BSP1Q06604 576 aa5.71□□□□□ -1.5
PRP40YKL012W ECM30Q06673 1274 aa5.71□□□□□ -1.5
PRP40YKL012W CDC45Q08032 650 aa5.71□□□□□ -1.5
PRP40YKL012W MCH4Q08268 501 aa5.71□□□□□ -1.5
PRP40YKL012W RML2P32611 393 aa5.7□□□□□ -1.5
PRP40YKL012W ARP1P38696 384 aa5.7□□□□□ -1.5
PRP40YKL012W ARN1P38731 627 aa5.7□□□□□ -1.5
PRP40YKL012W YJL055WP47044 245 aa5.7□□□□□ -1.5
PRP40YKL012W RSM23Q01163 450 aa5.7□□□□□ -1.5
PRP40YKL012W SNU56Q03782 492 aaKnown RBP5.7□□□□□ -1.5
PRP40YKL012W GPM3Q12326 303 aa5.7□□□□□ -1.5
PRP40YKL012W PNS1Q12412 539 aa5.7□□□□□ -1.5
PRP40YKL012W PUT2P07275 575 aa5.7□□□□□ -1.5
PRP40YKL012W TPM1P17536 199 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms