RNA–Protein interactions for RNA: YIL137C

TMA108, Transcript of Ribosome-associated protein that is involved in ribosome biogenesis, yeast

Gene TMA108, Length 2,841 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TMA108	YIL137C	GIS4	Q04233	774 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	PDS5	Q04264	1277 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	ERV41	Q04651	352 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	RSA3	Q05942	220 aa	Known RBP	3.47	□□□□□ -1.85
TMA108	YIL137C	THI22	Q06490	572 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	GLE1	Q12315	538 aa		3.47	□□□□□ -1.85
TMA108	YIL137C	PCK1	P10963	549 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	GCD2	P12754	651 aa	Predicted RBP	3.46	□□□□□ -1.86
TMA108	YIL137C	MEK1	P24719	497 aa	Predicted RBP	3.46	□□□□□ -1.86
TMA108	YIL137C	RPS5	P26783	225 aa	Known RBP	3.46	□□□□□ -1.86
TMA108	YIL137C	ICL1	P28240	557 aa	Predicted RBP	3.46	□□□□□ -1.86
TMA108	YIL137C	SAP190	P36123	1033 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	SLM4	P38247	162 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	SMF2	P38778	549 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	YIL089W	P40500	205 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	DLD2	P46681	530 aa	Known RBP	3.46	□□□□□ -1.86
TMA108	YIL137C	MRK1	P50873	501 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	LCL3	P53153	274 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	PGA2	P53903	129 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	ORC4	P54791	529 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	TRS31	Q03337	283 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	YLR173W	Q06247	608 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	NDL1	Q06568	189 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	GPN2	Q08726	347 aa	Predicted RBP	3.46	□□□□□ -1.86
TMA108	YIL137C	RIM20	Q12033	661 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	ATG29	Q12092	213 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	TIP41	Q12199	356 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	PRD1	P25375	712 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	RDS1	P25611	832 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	ZIP1	P31111	875 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	PGM1	P33401	570 aa	Known RBP	3.46	□□□□□ -1.86
TMA108	YIL137C	CUE2	P36075	443 aa	Known RBP	3.46	□□□□□ -1.86
TMA108	YIL137C	GLG1	P36143	616 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	PET100	P38958	111 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	SHQ1	P40486	507 aa	Predicted RBP	3.46	□□□□□ -1.86
TMA108	YIL137C	IST3	P40565	148 aa	Predicted RBP	3.46	□□□□□ -1.86
TMA108	YIL137C	ERG10	P41338	398 aa	Known RBP	3.46	□□□□□ -1.86
TMA108	YIL137C	YAR1	P46683	200 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	CTH1	P47976	325 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	INA17	Q02888	182 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	SSQ1	Q05931	657 aa	Predicted RBP	3.46	□□□□□ -1.86
TMA108	YIL137C	TMA16	Q08687	178 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	YRM1	Q12340	786 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	SEC39	Q12745	709 aa		3.46	□□□□□ -1.86
TMA108	YIL137C	DIF1	O13577	133 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	CDC36	P06100	191 aa	Predicted RBP	3.45	□□□□□ -1.86
TMA108	YIL137C	MSS116	P15424	664 aa	Known RBP	3.45	□□□□□ -1.86
TMA108	YIL137C	SAG1	P20840	650 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	HXT1	P32465	570 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	TIF3	P34167	436 aa	Known RBP	3.45	□□□□□ -1.86
TMA108	YIL137C	CMC1	P36064	111 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	PXL1	P36166	706 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	MRPL4	P36517	319 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	TIF5	P38431	405 aa	Known RBP	3.45	□□□□□ -1.86
TMA108	YIL137C	FET4	P40988	552 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	YNL134C	P53912	376 aa	Known RBP	3.45	□□□□□ -1.86
TMA108	YIL137C	AQR1	P53943	586 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	YNL035C	P53962	389 aa	Known RBP	3.45	□□□□□ -1.86
TMA108	YIL137C	FUS2	Q05670	677 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	YLR297W	Q05899	129 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	STP3	Q05937	343 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	BRR1	Q99177	341 aa	Predicted RBP	3.45	□□□□□ -1.86
TMA108	YIL137C	TPK2	P06245	380 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	CBP1	P07252	654 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	EST1	P17214	699 aa	Predicted RBP	3.45	□□□□□ -1.86
TMA108	YIL137C	CKA2	P19454	339 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	RTG1	P32607	177 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	SEC61	P32915	480 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	TDP1	P38319	544 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	ERC1	P38767	581 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	TOM71	P38825	639 aa	Known RBP	3.45	□□□□□ -1.86
TMA108	YIL137C	GTO1	P48239	356 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	RIB4	P50861	169 aa	Predicted RBP	3.45	□□□□□ -1.86
TMA108	YIL137C	DIA3	P52290	468 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	ADE16	P54113	591 aa	Known RBP	3.45	□□□□□ -1.86
TMA108	YIL137C	RNT1	Q02555	471 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	VPS60	Q03390	229 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	ACL4	Q03771	387 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	MRPL1	Q04599	285 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	IVY1	Q04934	453 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	RTN1	Q04947	295 aa	Known RBP	3.45	□□□□□ -1.86
TMA108	YIL137C	BCP1	Q06338	283 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	RDR1	Q08904	546 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	HMI1	Q12039	706 aa		3.45	□□□□□ -1.86
TMA108	YIL137C	FUS3	P16892	353 aa	Known RBP	3.44	□□□□□ -1.86
TMA108	YIL137C	SEC15	P22224	910 aa		3.44	□□□□□ -1.86
TMA108	YIL137C	RVS161	P25343	265 aa	Known RBP	3.44	□□□□□ -1.86
TMA108	YIL137C	RPD3	P32561	433 aa		3.44	□□□□□ -1.86
TMA108	YIL137C	COT1	P32798	439 aa		3.44	□□□□□ -1.86
TMA108	YIL137C	MIA40	P36046	403 aa		3.44	□□□□□ -1.86
TMA108	YIL137C	ECM21	P38167	1117 aa	Known RBP	3.44	□□□□□ -1.86
TMA108	YIL137C	CRG1	P38892	291 aa	RIP-Chip data	3.44	□□□□□ -1.86	not detected
TMA108	YIL137C	REV7	P38927	245 aa		3.44	□□□□□ -1.86
TMA108	YIL137C	YHB1	P39676	399 aa	Known RBP	3.44	□□□□□ -1.86
TMA108	YIL137C	ULP2	P40537	1034 aa	Predicted RBP	3.44	□□□□□ -1.86
TMA108	YIL137C	MCM6	P53091	1017 aa	Known RBP	3.44	□□□□□ -1.86
TMA108	YIL137C	YGR045C	P53229	120 aa		3.44	□□□□□ -1.86
TMA108	YIL137C	YNL144C	P53907	740 aa		3.44	□□□□□ -1.86
TMA108	YIL137C	YKR011C	Q02209	353 aa		3.44	□□□□□ -1.86
TMA108	YIL137C	SKI8	Q02793	397 aa	Predicted RBP	3.44	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms