RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeast

Gene RTA1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTA1	YGR213C	MRP2	P10663	115 aa	Predicted RBP	4.16	□□□□□ -1.74
RTA1	YGR213C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
RTA1	YGR213C	PWP1	P21304	576 aa	Known RBP	4.16	□□□□□ -1.74
RTA1	YGR213C	MRPS28	P21771	286 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	TRX2	P22803	104 aa	Known RBP	4.16	□□□□□ -1.74
RTA1	YGR213C	CDC60	P26637	1090 aa	Known RBP	4.16	□□□□□ -1.74
RTA1	YGR213C	SRB5	P32585	307 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	TEF4	P36008	412 aa	Known RBP	4.16	□□□□□ -1.74
RTA1	YGR213C	RSM22	P36056	628 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	ADE17	P38009	592 aa	Known RBP	4.16	□□□□□ -1.74
RTA1	YGR213C	UME6	P39001	836 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	GAT1	P43574	510 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	IML2	P47031	731 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	ATP22	P50273	684 aa	Predicted RBP	4.16	□□□□□ -1.74
RTA1	YGR213C	YGR016W	P53209	190 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	SPC19	Q03954	165 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	RRP17	Q04031	235 aa	Predicted RBP	4.16	□□□□□ -1.74
RTA1	YGR213C	KRE28	Q04431	385 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	CRN1	Q06440	651 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	MDM36	Q06820	579 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	MCH4	Q08268	501 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	RRI1	Q12468	440 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	VCX1	Q99385	411 aa		4.16	□□□□□ -1.74
RTA1	YGR213C	YML133C	Q03099	1374 aa		4.15	□□□□□ -1.74
RTA1	YGR213C	YLL067C	Q07888	1374 aa		4.15	□□□□□ -1.74
RTA1	YGR213C	YLL066C	Q99208	1374 aa		4.15	□□□□□ -1.74
RTA1	YGR213C	YPR089W	O13585	888 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	RPT3	P33298	428 aa	Known RBP	4.15	□□□□□ -1.75
RTA1	YGR213C	NTR2	P36118	322 aa	Predicted RBP	4.15	□□□□□ -1.75
RTA1	YGR213C	AAP1	P37898	856 aa	Known RBP	4.15	□□□□□ -1.75
RTA1	YGR213C	RXT2	P38255	430 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	SPC97	P38863	823 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	FLO5	P38894	1075 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	PCI8	P40512	444 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	GCD10	P41814	478 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	SWP82	P43554	623 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	VTC2	P43585	828 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	GCD14	P46959	383 aa	Predicted RBP	4.15	□□□□□ -1.75
RTA1	YGR213C	SGM1	P47166	707 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	TRF5	P48561	642 aa	Known RBP	4.15	□□□□□ -1.75
RTA1	YGR213C	HST1	P53685	503 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	IPI3	P53877	555 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	ARP5	P53946	755 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	ASI1	P54074	624 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	RPL15B	P54780	204 aa	Predicted RBP	4.15	□□□□□ -1.75
RTA1	YGR213C	ZDS2	P54786	942 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
RTA1	YGR213C	YML131W	Q03102	365 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	ERO1	Q03103	563 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	YML108W	Q03759	105 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	YLR455W	Q06188	304 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	YLR352W	Q06479	807 aa		4.15	□□□□□ -1.75
RTA1	YGR213C	ERG27	Q12452	347 aa	Known RBP	4.15	□□□□□ -1.75
RTA1	YGR213C	RAV1	P47104	1357 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	TEF1	P02994	458 aa	Known RBP	4.14	□□□□□ -1.75
RTA1	YGR213C	ARD1	P07347	238 aa	Predicted RBP	4.14	□□□□□ -1.75
RTA1	YGR213C	GPA1	P08539	472 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	SSC1	P0CS90	654 aa	Known RBP	4.14	□□□□□ -1.75
RTA1	YGR213C	VPS1	P21576	704 aa	Known RBP	4.14	□□□□□ -1.75
RTA1	YGR213C	AIM17	P23180	465 aa	Known RBP	4.14	□□□□□ -1.75
RTA1	YGR213C	ERG8	P24521	451 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	YCR006C	P25350	157 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	PGS1	P25578	521 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	MSP1	P28737	362 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	NTG1	P31378	399 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	VPH1	P32563	840 aa	Known RBP	4.14	□□□□□ -1.75
RTA1	YGR213C	YEL043W	P32618	956 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	ASK1	P35734	292 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	YKL050C	P35736	922 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	VPS51	P36116	164 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	GDT1	P38301	280 aa	Predicted RBP	4.14	□□□□□ -1.75
RTA1	YGR213C	SEC31	P38968	1273 aa	Known RBP	4.14	□□□□□ -1.75
RTA1	YGR213C	PSD1	P39006	500 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	TIF4631	P39935	952 aa	Known RBP	4.14	□□□□□ -1.75
RTA1	YGR213C	SNM1	P40993	198 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	RPN11	P43588	306 aa	Known RBP	4.14	□□□□□ -1.75
RTA1	YGR213C	MDV1	P47025	714 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	SNX4	P47057	423 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	YNR061C	P53747	219 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	REG1	Q00816	1014 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	MRPL1	Q04599	285 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	VIP1	Q06685	1146 aa	Known RBP	4.14	□□□□□ -1.75
RTA1	YGR213C	BRX1	Q08235	291 aa	Known RBP	4.14	□□□□□ -1.75
RTA1	YGR213C	BUD7	Q08754	746 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	DRS2	P39524	1355 aa		4.14	□□□□□ -1.75
RTA1	YGR213C	HOM3	P10869	527 aa		4.13	□□□□□ -1.75
RTA1	YGR213C	MSS116	P15424	664 aa	Known RBP	4.13	□□□□□ -1.75
RTA1	YGR213C	GUK1	P15454	187 aa	Known RBP	4.13	□□□□□ -1.75
RTA1	YGR213C	YCP4	P25349	247 aa	Known RBP	4.13	□□□□□ -1.75
RTA1	YGR213C	OCA4	P25366	362 aa		4.13	□□□□□ -1.75
RTA1	YGR213C	HSP104	P31539	908 aa	Known RBP	4.13	□□□□□ -1.75
RTA1	YGR213C	KAR9	P32526	644 aa		4.13	□□□□□ -1.75
RTA1	YGR213C	CNS1	P33313	385 aa		4.13	□□□□□ -1.75
RTA1	YGR213C	SLC1	P33333	303 aa		4.13	□□□□□ -1.75
RTA1	YGR213C	PXA2	P34230	853 aa		4.13	□□□□□ -1.75
RTA1	YGR213C	LHS1	P36016	881 aa		4.13	□□□□□ -1.75
RTA1	YGR213C	OSH3	P38713	996 aa	Known RBP	4.13	□□□□□ -1.75
RTA1	YGR213C	AXL2	P38928	823 aa		4.13	□□□□□ -1.75
RTA1	YGR213C	YER010C	P40011	234 aa		4.13	□□□□□ -1.75
RTA1	YGR213C	MRX1	P40050	688 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms