RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W YPR071WQ12346 211 aa6.42□□□□□ -1.38
MSP1YGR028W AI5_ALPHAQ9ZZX1 630 aa6.42□□□□□ -1.38
MSP1YGR028W SUC2P00724 532 aa6.41□□□□□ -1.38
MSP1YGR028W TUB3P09734 445 aaKnown RBP6.41□□□□□ -1.38
MSP1YGR028W PMS1P14242 873 aa6.41□□□□□ -1.38
MSP1YGR028W POL30P15873 258 aaKnown RBP6.41□□□□□ -1.38
MSP1YGR028W ERG6P25087 383 aaKnown RBP6.41□□□□□ -1.38
MSP1YGR028W DCC1P25559 380 aa6.41□□□□□ -1.38
MSP1YGR028W BRF1P29056 596 aa6.41□□□□□ -1.38
MSP1YGR028W HXT1P32465 570 aa6.41□□□□□ -1.38
MSP1YGR028W DIA4P38705 446 aaPredicted RBP6.41□□□□□ -1.38
MSP1YGR028W YHL041WP38730 149 aa6.41□□□□□ -1.38
MSP1YGR028W EFM4P40516 257 aa6.41□□□□□ -1.38
MSP1YGR028W TES1P41903 349 aaKnown RBP6.41□□□□□ -1.38
MSP1YGR028W GND2P53319 492 aa6.41□□□□□ -1.38
MSP1YGR028W TRM82Q03774 444 aa6.41□□□□□ -1.38
MSP1YGR028W YAP6Q03935 383 aa6.41□□□□□ -1.38
MSP1YGR028W PPN1Q04119 674 aa6.41□□□□□ -1.38
MSP1YGR028W RPN8Q08723 338 aaKnown RBP6.41□□□□□ -1.38
MSP1YGR028W YLL056CQ12177 298 aa6.41□□□□□ -1.38
MSP1YGR028W RPL1AP0CX43 217 aaKnown RBP6.4□□□□□ -1.38
MSP1YGR028W RPL1BP0CX44 217 aaKnown RBP6.4□□□□□ -1.38
MSP1YGR028W RFA1P22336 621 aaKnown RBP6.4□□□□□ -1.38
MSP1YGR028W MFT1P33441 392 aaKnown RBP6.4□□□□□ -1.38
MSP1YGR028W LRP1P38801 184 aaKnown RBP6.4□□□□□ -1.38
MSP1YGR028W ERV46P39727 415 aa6.4□□□□□ -1.38
MSP1YGR028W ELO3P40319 345 aa6.4□□□□□ -1.38
MSP1YGR028W URM1P40554 99 aaPredicted RBP6.4□□□□□ -1.38
MSP1YGR028W UBP6P43593 499 aaKnown RBP6.4□□□□□ -1.38
MSP1YGR028W CTK3P46963 296 aaPredicted RBP6.4□□□□□ -1.38
MSP1YGR028W STR3P53101 465 aaKnown RBP6.4□□□□□ -1.38
MSP1YGR028W BTN2P53286 410 aa6.4□□□□□ -1.38
MSP1YGR028W TEP1P53916 434 aa6.4□□□□□ -1.38
MSP1YGR028W YMR114CQ04471 368 aaKnown RBP6.4□□□□□ -1.38
MSP1YGR028W YLR224WQ05947 369 aa6.4□□□□□ -1.38
MSP1YGR028W LDB18Q07887 179 aa6.4□□□□□ -1.38
MSP1YGR028W RKM5Q12367 367 aa6.4□□□□□ -1.38
MSP1YGR028W ACO1P19414 778 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
MSP1YGR028W CLN1P20437 546 aa6.39□□□□□ -1.39
MSP1YGR028W RAD5P32849 1169 aaPredicted RBP6.39□□□□□ -1.39
MSP1YGR028W STO1P34160 861 aaKnown RBP6.39□□□□□ -1.39
MSP1YGR028W YBR259WP38338 688 aa6.39□□□□□ -1.39
MSP1YGR028W RCK2P38623 610 aa6.39□□□□□ -1.39
MSP1YGR028W MPT5P39016 859 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
MSP1YGR028W YAT2P40017 923 aa6.39□□□□□ -1.39
MSP1YGR028W IST3P40565 148 aaPredicted RBP6.39□□□□□ -1.39
MSP1YGR028W SIP4P46954 829 aa6.39□□□□□ -1.39
MSP1YGR028W SET2P46995 733 aaKnown RBP6.39□□□□□ -1.39
MSP1YGR028W IML2P47031 731 aa6.39□□□□□ -1.39
MSP1YGR028W NIT3P49954 291 aa6.39□□□□□ -1.39
MSP1YGR028W SAP4P53036 818 aa6.39□□□□□ -1.39
MSP1YGR028W CDC14Q00684 551 aa6.39□□□□□ -1.39
MSP1YGR028W YML096WQ04489 525 aa6.39□□□□□ -1.39
MSP1YGR028W NRT1Q08485 598 aa6.39□□□□□ -1.39
MSP1YGR028W FAP7Q12055 197 aaPredicted RBP6.39□□□□□ -1.39
MSP1YGR028W IRA1P18963 3092 aa6.39□□□□□ -1.39
MSP1YGR028W AEP1P32493 518 aa6.38□□□□□ -1.39
MSP1YGR028W MSR1P38714 643 aa6.38□□□□□ -1.39
MSP1YGR028W END3P39013 349 aa6.38□□□□□ -1.39
MSP1YGR028W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
MSP1YGR028W SWC4P53201 476 aa6.38□□□□□ -1.39
MSP1YGR028W ALF1P53904 254 aa6.38□□□□□ -1.39
MSP1YGR028W YNL143CP53908 130 aa6.38□□□□□ -1.39
MSP1YGR028W SLU7Q02775 382 aaKnown RBP6.38□□□□□ -1.39
MSP1YGR028W YMR160WQ03823 816 aa6.38□□□□□ -1.39
MSP1YGR028W YDR131CQ03899 556 aa6.38□□□□□ -1.39
MSP1YGR028W LDB17Q12342 491 aa6.38□□□□□ -1.39
MSP1YGR028W YKR104WP0CE69 306 aa6.37□□□□□ -1.39
MSP1YGR028W RED1P14291 827 aa6.37□□□□□ -1.39
MSP1YGR028W PHO11P35842 467 aa6.37□□□□□ -1.39
MSP1YGR028W SRP72P38688 640 aaKnown RBP6.37□□□□□ -1.39
MSP1YGR028W PHO12P38693 467 aa6.37□□□□□ -1.39
MSP1YGR028W LEU5P38702 357 aa6.37□□□□□ -1.39
MSP1YGR028W CKB2P38930 258 aa6.37□□□□□ -1.39
MSP1YGR028W PLB1P39105 664 aa6.37□□□□□ -1.39
MSP1YGR028W TIM17P39515 158 aa6.37□□□□□ -1.39
MSP1YGR028W BUD13P46947 266 aaPredicted RBP6.37□□□□□ -1.39
MSP1YGR028W COG1P53079 417 aa6.37□□□□□ -1.39
MSP1YGR028W FRE4P53746 719 aa6.37□□□□□ -1.39
MSP1YGR028W YLR456WQ06199 204 aa6.37□□□□□ -1.39
MSP1YGR028W THI73Q07904 523 aa6.37□□□□□ -1.39
MSP1YGR028W SRO7Q12038 1033 aa6.37□□□□□ -1.39
MSP1YGR028W YLR149CQ99296 730 aa6.37□□□□□ -1.39
MSP1YGR028W YOR338WQ99326 363 aa6.37□□□□□ -1.39
MSP1YGR028W TUB1P09733 447 aaKnown RBP6.36□□□□□ -1.39
MSP1YGR028W UBA1P22515 1024 aaKnown RBP6.36□□□□□ -1.39
MSP1YGR028W SNT1P25357 1226 aa6.36□□□□□ -1.39
MSP1YGR028W SRB4P32569 687 aa6.36□□□□□ -1.39
MSP1YGR028W LST4P34239 828 aa6.36□□□□□ -1.39
MSP1YGR028W PBP2P38151 413 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
MSP1YGR028W PCL10P53124 433 aa6.36□□□□□ -1.39
MSP1YGR028W DAM1P53267 343 aa6.36□□□□□ -1.39
MSP1YGR028W NRM1P53718 249 aa6.36□□□□□ -1.39
MSP1YGR028W NUP100Q02629 959 aa6.36□□□□□ -1.39
MSP1YGR028W GSF2Q04697 403 aaKnown RBP6.36□□□□□ -1.39
MSP1YGR028W ARG7Q04728 441 aa6.36□□□□□ -1.39
MSP1YGR028W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
MSP1YGR028W TRM8Q12009 286 aa6.36□□□□□ -1.39
MSP1YGR028W CDC24P11433 854 aaPredicted RBP6.35□□□□□ -1.39
MSP1YGR028W TOP3P13099 656 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms