RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W RDR1Q08904 546 aa1.49□□□□□ -2.17
CUL3YGR003W NCE102Q12207 173 aaRIP-Chip data1.49□□□□□ -2.17not detected
CUL3YGR003W MCM4P30665 933 aaKnown RBP1.48□□□□□ -2.17
CUL3YGR003W PDB1P32473 366 aaKnown RBP1.48□□□□□ -2.17
CUL3YGR003W ERG1P32476 496 aaKnown RBP1.48□□□□□ -2.17
CUL3YGR003W MTR2P34232 184 aaKnown RBP1.48□□□□□ -2.17
CUL3YGR003W PHD1P36093 366 aa1.48□□□□□ -2.17
CUL3YGR003W RKM3P38222 552 aa1.48□□□□□ -2.17
CUL3YGR003W IAH1P41734 238 aa1.48□□□□□ -2.17
CUL3YGR003W APJ1P53940 528 aa1.48□□□□□ -2.17
CUL3YGR003W YPL014WQ02606 381 aa1.48□□□□□ -2.17
CUL3YGR003W YLR352WQ06479 807 aa1.48□□□□□ -2.17
CUL3YGR003W NUS1Q12063 375 aa1.48□□□□□ -2.17
CUL3YGR003W PDH1Q12428 516 aaKnown RBP1.48□□□□□ -2.17
CUL3YGR003W PUT2P07275 575 aa1.48□□□□□ -2.17
CUL3YGR003W FUM1P08417 488 aaKnown RBP1.48□□□□□ -2.17
CUL3YGR003W PDA1P16387 420 aaKnown RBP1.48□□□□□ -2.17
CUL3YGR003W ELO2P25358 347 aa1.48□□□□□ -2.17
CUL3YGR003W YCR022CP25620 114 aa1.48□□□□□ -2.17
CUL3YGR003W ACH1P32316 526 aa1.48□□□□□ -2.17
CUL3YGR003W MCM10P32354 571 aa1.48□□□□□ -2.17
CUL3YGR003W MAL33P38157 468 aa1.48□□□□□ -2.17
CUL3YGR003W DIA4P38705 446 aaPredicted RBP1.48□□□□□ -2.17
CUL3YGR003W UIP3P39547 235 aa1.48□□□□□ -2.17
CUL3YGR003W YJL070CP40361 888 aa1.48□□□□□ -2.17
CUL3YGR003W SHE10P53075 577 aa1.48□□□□□ -2.17
CUL3YGR003W YDR415CQ04033 374 aaPredicted RBP1.48□□□□□ -2.17
CUL3YGR003W EMI2Q04409 500 aaKnown RBP1.48□□□□□ -2.17
CUL3YGR003W TEN1Q07921 160 aa1.48□□□□□ -2.17
CUL3YGR003W ARD1P07347 238 aaPredicted RBP1.47□□□□□ -2.17
CUL3YGR003W YCK1P23291 538 aa1.47□□□□□ -2.17
CUL3YGR003W POL4P25615 582 aa1.47□□□□□ -2.17
CUL3YGR003W RPN2P32565 945 aaKnown RBP1.47□□□□□ -2.17
CUL3YGR003W CCT6P39079 546 aa1.47□□□□□ -2.17
CUL3YGR003W KAP123P40069 1113 aaKnown RBP1.47□□□□□ -2.17
CUL3YGR003W SGM1P47166 707 aa1.47□□□□□ -2.17
CUL3YGR003W TDA7P53882 636 aaPredicted RBP1.47□□□□□ -2.17
CUL3YGR003W PSR1Q07800 427 aa1.47□□□□□ -2.17
CUL3YGR003W PMS1P14242 873 aa1.47□□□□□ -2.17
CUL3YGR003W AGA1P32323 725 aa1.47□□□□□ -2.17
CUL3YGR003W TRS65P32893 560 aa1.47□□□□□ -2.17
CUL3YGR003W AGP2P38090 596 aa1.47□□□□□ -2.17
CUL3YGR003W YNG2P38806 282 aaKnown RBP1.47□□□□□ -2.17
CUL3YGR003W RTS1P38903 757 aa1.47□□□□□ -2.17
CUL3YGR003W VPS52P39904 641 aa1.47□□□□□ -2.17
CUL3YGR003W YEL068CP39977 110 aa1.47□□□□□ -2.17
CUL3YGR003W RGI2P40188 164 aa1.47□□□□□ -2.17
CUL3YGR003W SGN1P40561 250 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
CUL3YGR003W DIA3P52290 468 aa1.47□□□□□ -2.17
CUL3YGR003W YVH1Q02256 364 aaKnown RBP1.47□□□□□ -2.17
CUL3YGR003W MSS11Q03825 758 aa1.47□□□□□ -2.17
CUL3YGR003W DPB4Q04603 196 aaKnown RBP1.47□□□□□ -2.17
CUL3YGR003W APL4Q12028 832 aa1.47□□□□□ -2.17
CUL3YGR003W TAH18Q12181 623 aa1.47□□□□□ -2.17
CUL3YGR003W RPL15AP05748 204 aaKnown RBP1.46□□□□□ -2.18
CUL3YGR003W MRP13P12686 339 aa1.46□□□□□ -2.18
CUL3YGR003W PUP3P25451 205 aaKnown RBP1.46□□□□□ -2.18
CUL3YGR003W CDC15P27636 974 aa1.46□□□□□ -2.18
CUL3YGR003W YBL055CP34220 418 aaPredicted RBP1.46□□□□□ -2.18
CUL3YGR003W YKL050CP35736 922 aa1.46□□□□□ -2.18
CUL3YGR003W AUR1P36107 401 aaPredicted RBP1.46□□□□□ -2.18
CUL3YGR003W NUP133P36161 1157 aa1.46□□□□□ -2.18
CUL3YGR003W ROT2P38138 954 aa1.46□□□□□ -2.18
CUL3YGR003W DBP8P38719 431 aa1.46□□□□□ -2.18
CUL3YGR003W KEL1P38853 1164 aaKnown RBP1.46□□□□□ -2.18
CUL3YGR003W RPR2P40571 144 aa1.46□□□□□ -2.18
CUL3YGR003W AXL1P40851 1208 aa1.46□□□□□ -2.18
CUL3YGR003W ARC1P46672 376 aaKnown RBP1.46□□□□□ -2.18
CUL3YGR003W SMC3P47037 1230 aa1.46□□□□□ -2.18
CUL3YGR003W UPF3P48412 387 aaKnown RBP1.46□□□□□ -2.18
CUL3YGR003W APT1P49435 187 aaKnown RBP1.46□□□□□ -2.18
CUL3YGR003W ERG26P53199 349 aaKnown RBP1.46□□□□□ -2.18
CUL3YGR003W BSC5P53755 489 aa1.46□□□□□ -2.18
CUL3YGR003W EFM6P53970 246 aa1.46□□□□□ -2.18
CUL3YGR003W RLI1Q03195 608 aaKnown RBP1.46□□□□□ -2.18
CUL3YGR003W HCR1Q05775 265 aaKnown RBP1.46□□□□□ -2.18
CUL3YGR003W COQ9Q05779 260 aa1.46□□□□□ -2.18
CUL3YGR003W YLR281CQ05863 155 aa1.46□□□□□ -2.18
CUL3YGR003W ECM30Q06673 1274 aa1.46□□□□□ -2.18
CUL3YGR003W YDR056CQ12025 205 aa1.46□□□□□ -2.18
CUL3YGR003W YBR298C-AQ8TGK4 73 aa1.46□□□□□ -2.18
CUL3YGR003W SGS1P35187 1447 aa1.46□□□□□ -2.18
CUL3YGR003W CDC16P09798 840 aa1.46□□□□□ -2.18
CUL3YGR003W YML002WP0CF17 737 aa1.46□□□□□ -2.18
CUL3YGR003W AMD1P15274 810 aaKnown RBP1.46□□□□□ -2.18
CUL3YGR003W AAC3P18238 307 aa1.46□□□□□ -2.18
CUL3YGR003W CHS3P29465 1165 aa1.46□□□□□ -2.18
CUL3YGR003W MRPL4P36517 319 aa1.46□□□□□ -2.18
CUL3YGR003W VID27P40157 782 aa1.46□□□□□ -2.18
CUL3YGR003W DUO1P53168 247 aaKnown RBP1.46□□□□□ -2.18
CUL3YGR003W SMM1P53720 384 aaKnown RBP1.46□□□□□ -2.18
CUL3YGR003W RHO4Q00246 291 aa1.46□□□□□ -2.18
CUL3YGR003W RPM2Q02773 1202 aa1.46□□□□□ -2.18
CUL3YGR003W THI20Q08224 551 aa1.46□□□□□ -2.18
CUL3YGR003W RAD52P06778 471 aaKnown RBP1.45□□□□□ -2.18
CUL3YGR003W CDC24P11433 854 aaPredicted RBP1.45□□□□□ -2.18
CUL3YGR003W TYR1P20049 452 aa1.45□□□□□ -2.18
CUL3YGR003W CMK1P27466 446 aaKnown RBP1.45□□□□□ -2.18
CUL3YGR003W BUD14P27637 709 aa1.45□□□□□ -2.18
CUL3YGR003W SIP2P34164 415 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms