RNA–Protein interactions for RNA: YDR469W

SDC1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SDC1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC1YDR469W REV1P12689 985 aa2.46□□□□□ -2.02
SDC1YDR469W CLB1P24868 471 aa2.46□□□□□ -2.02
SDC1YDR469W CLB3P24870 427 aa2.46□□□□□ -2.02
SDC1YDR469W RRP7P25368 297 aaPredicted RBP2.46□□□□□ -2.02
SDC1YDR469W PRP45P28004 379 aaPredicted RBP2.46□□□□□ -2.02
SDC1YDR469W PRE2P30656 287 aaKnown RBP2.46□□□□□ -2.02
SDC1YDR469W RPN2P32565 945 aaKnown RBP2.46□□□□□ -2.02
SDC1YDR469W MAL33P38157 468 aa2.46□□□□□ -2.02
SDC1YDR469W BZZ1P38822 633 aa2.46□□□□□ -2.02
SDC1YDR469W AFG3P39925 761 aa2.46□□□□□ -2.02
SDC1YDR469W ARB1P40024 610 aaKnown RBP2.46□□□□□ -2.02
SDC1YDR469W EFM4P40516 257 aa2.46□□□□□ -2.02
SDC1YDR469W FYV8P46949 817 aaKnown RBP2.46□□□□□ -2.02
SDC1YDR469W ORC5P50874 479 aa2.46□□□□□ -2.02
SDC1YDR469W BNI5P53890 448 aaKnown RBP2.46□□□□□ -2.02
SDC1YDR469W NCS2P53923 493 aaPredicted RBP2.46□□□□□ -2.02
SDC1YDR469W FMP45Q07651 309 aa2.46□□□□□ -2.02
SDC1YDR469W RIX7Q07844 837 aaKnown RBP2.46□□□□□ -2.02
SDC1YDR469W RLP24Q07915 199 aaKnown RBP2.46□□□□□ -2.02
SDC1YDR469W RIM20Q12033 661 aa2.46□□□□□ -2.02
SDC1YDR469W REX3Q12090 404 aa2.46□□□□□ -2.02
SDC1YDR469W LCB4Q12246 624 aa2.46□□□□□ -2.02
SDC1YDR469W NOP58Q12499 511 aaKnown RBP2.46□□□□□ -2.02
SDC1YDR469W RPB2P08518 1224 aaKnown RBP2.45□□□□□ -2.02
SDC1YDR469W APE1P14904 514 aa2.45□□□□□ -2.02
SDC1YDR469W CDC23P16522 626 aa2.45□□□□□ -2.02
SDC1YDR469W SWC3P31376 625 aa2.45□□□□□ -2.02
SDC1YDR469W LAS1P36146 502 aaPredicted RBP2.45□□□□□ -2.02
SDC1YDR469W MNN2P38069 597 aa2.45□□□□□ -2.02
SDC1YDR469W FLC2P39719 783 aa2.45□□□□□ -2.02
SDC1YDR469W YEL057CP39983 233 aa2.45□□□□□ -2.02
SDC1YDR469W PCL6P40038 420 aa2.45□□□□□ -2.02
SDC1YDR469W DJP1P40564 432 aa2.45□□□□□ -2.02
SDC1YDR469W IDS2P46958 469 aa2.45□□□□□ -2.02
SDC1YDR469W CRZ1P53968 678 aa2.45□□□□□ -2.02
SDC1YDR469W YPL108WQ02872 168 aaPredicted RBP2.45□□□□□ -2.02
SDC1YDR469W YML037CQ03703 340 aa2.45□□□□□ -2.02
SDC1YDR469W RCO1Q04779 684 aa2.45□□□□□ -2.02
SDC1YDR469W RSF1Q05043 376 aa2.45□□□□□ -2.02
SDC1YDR469W YLR456WQ06199 204 aa2.45□□□□□ -2.02
SDC1YDR469W KEL3Q08979 651 aaPredicted RBP2.45□□□□□ -2.02
SDC1YDR469W NUS1Q12063 375 aa2.45□□□□□ -2.02
SDC1YDR469W GPM3Q12326 303 aa2.45□□□□□ -2.02
SDC1YDR469W ERG27Q12452 347 aaKnown RBP2.45□□□□□ -2.02
SDC1YDR469W YOR019WQ99248 730 aa2.45□□□□□ -2.02
SDC1YDR469W RPC40P07703 335 aaKnown RBP2.44□□□□□ -2.02
SDC1YDR469W VMA2P16140 517 aaKnown RBP2.44□□□□□ -2.02
SDC1YDR469W KAR3P17119 729 aa2.44□□□□□ -2.02
SDC1YDR469W MDH1P17505 334 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
SDC1YDR469W PWP1P21304 576 aaKnown RBP2.44□□□□□ -2.02
SDC1YDR469W REC107P21651 314 aa2.44□□□□□ -2.02
SDC1YDR469W YCR051WP25631 222 aa2.44□□□□□ -2.02
SDC1YDR469W ERV1P27882 189 aa2.44□□□□□ -2.02
SDC1YDR469W PAP1P29468 568 aaKnown RBP2.44□□□□□ -2.02
SDC1YDR469W GSH1P32477 678 aa2.44□□□□□ -2.02
SDC1YDR469W UBP11P36026 717 aa2.44□□□□□ -2.02
SDC1YDR469W ARN1P38731 627 aa2.44□□□□□ -2.02
SDC1YDR469W SMF1P38925 575 aa2.44□□□□□ -2.02
SDC1YDR469W RGI2P40188 164 aa2.44□□□□□ -2.02
SDC1YDR469W YIL161WP40449 235 aaKnown RBP2.44□□□□□ -2.02
SDC1YDR469W MET18P40469 1032 aa2.44□□□□□ -2.02
SDC1YDR469W SGN1P40561 250 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
SDC1YDR469W ASE1P50275 885 aa2.44□□□□□ -2.02
SDC1YDR469W VPS4P52917 437 aa2.44□□□□□ -2.02
SDC1YDR469W PIL1P53252 339 aaKnown RBP2.44□□□□□ -2.02
SDC1YDR469W CSL4P53859 292 aaPredicted RBP2.44□□□□□ -2.02
SDC1YDR469W EOS1P53938 366 aa2.44□□□□□ -2.02
SDC1YDR469W VPS9P54787 451 aa2.44□□□□□ -2.02
SDC1YDR469W ADA2Q02336 434 aa2.44□□□□□ -2.02
SDC1YDR469W YPL107WQ02873 248 aa2.44□□□□□ -2.02
SDC1YDR469W IZH1Q03419 316 aa2.44□□□□□ -2.02
SDC1YDR469W YDR239CQ03780 787 aa2.44□□□□□ -2.02
SDC1YDR469W VAM6Q07468 1049 aa2.44□□□□□ -2.02
SDC1YDR469W AIM6Q07716 390 aa2.44□□□□□ -2.02
SDC1YDR469W TCO89Q08921 799 aa2.44□□□□□ -2.02
SDC1YDR469W NMD4Q12129 218 aa2.44□□□□□ -2.02
SDC1YDR469W GRX6Q12438 231 aa2.44□□□□□ -2.02
SDC1YDR469W AFI1Q99222 893 aa2.44□□□□□ -2.02
SDC1YDR469W INO80P53115 1489 aa2.44□□□□□ -2.02
SDC1YDR469W BIK1P11709 440 aa2.43□□□□□ -2.02
SDC1YDR469W EST1P17214 699 aaPredicted RBP2.43□□□□□ -2.02
SDC1YDR469W SEC1P30619 724 aaKnown RBP2.43□□□□□ -2.02
SDC1YDR469W TFB1P32776 642 aa2.43□□□□□ -2.02
SDC1YDR469W UBP13P38187 747 aa2.43□□□□□ -2.02
SDC1YDR469W KRE9P39005 276 aa2.43□□□□□ -2.02
SDC1YDR469W SLZ1P40167 298 aa2.43□□□□□ -2.02
SDC1YDR469W PCL7P40186 285 aa2.43□□□□□ -2.02
SDC1YDR469W AAD10P47182 288 aa2.43□□□□□ -2.02
SDC1YDR469W LYS4P49367 693 aaPredicted RBP2.43□□□□□ -2.02
SDC1YDR469W CUL3P53202 744 aa2.43□□□□□ -2.02
SDC1YDR469W INN1P53901 409 aa2.43□□□□□ -2.02
SDC1YDR469W ADD37Q03233 198 aa2.43□□□□□ -2.02
SDC1YDR469W YMR111CQ04461 462 aaPredicted RBP2.43□□□□□ -2.02
SDC1YDR469W ROY1Q04847 553 aa2.43□□□□□ -2.02
SDC1YDR469W CRF1Q04930 467 aa2.43□□□□□ -2.02
SDC1YDR469W SPH1Q06160 661 aa2.43□□□□□ -2.02
SDC1YDR469W RRP9Q06506 573 aaKnown RBP2.43□□□□□ -2.02
SDC1YDR469W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
SDC1YDR469W YLR112WQ12130 139 aa2.43□□□□□ -2.02
SDC1YDR469W VCX1Q99385 411 aa2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms