RNA–Protein interactions for RNA: YDR003W

RCR2, Transcript of Vacuolar protein, yeast

Gene RCR2, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCR2	YDR003W	ARP9	Q05123	467 aa		4.21	□□□□□ -1.74
RCR2	YDR003W	ADY4	Q05955	493 aa		4.21	□□□□□ -1.74
RCR2	YDR003W	HRT3	Q12347	344 aa		4.21	□□□□□ -1.74
RCR2	YDR003W	ICT1	Q12385	394 aa		4.21	□□□□□ -1.74
RCR2	YDR003W	YBR126W-A	Q8TGU7	68 aa		4.21	□□□□□ -1.74
RCR2	YDR003W	YLR302C	O13544	120 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	ILV1	P00927	576 aa	Known RBP	4.2	□□□□□ -1.74
RCR2	YDR003W	COX4	P04037	155 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	GAL80	P04387	435 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	SEC53	P07283	254 aa	Known RBP	4.2	□□□□□ -1.74
RCR2	YDR003W	RPL19A	P0CX82	189 aa	Known RBP	4.2	□□□□□ -1.74
RCR2	YDR003W	RPL19B	P0CX83	189 aa	Predicted RBP	4.2	□□□□□ -1.74
RCR2	YDR003W	FPR1	P20081	114 aa	Known RBP	4.2	□□□□□ -1.74
RCR2	YDR003W	VPS3	P23643	1011 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	ROX1	P25042	368 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	BRF1	P29056	596 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	SAC6	P32599	642 aa	Known RBP	4.2	□□□□□ -1.74
RCR2	YDR003W	MRX3	P38172	270 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	TIF5	P38431	405 aa	Known RBP	4.2	□□□□□ -1.74
RCR2	YDR003W	ERV46	P39727	415 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	GID8	P40208	455 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	MEP1	P40260	492 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	SPO22	P40511	975 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	MUP1	P50276	574 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	MNP1	P53163	194 aa	Predicted RBP	4.2	□□□□□ -1.74
RCR2	YDR003W	COX18	P53239	316 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	VPS75	P53853	264 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	SEC5	P89102	971 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	YSA1	Q01976	231 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	ATG21	Q02887	496 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	HER2	Q03557	464 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	SEG1	Q04279	960 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	HOF1	Q05080	669 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	ENT4	Q07872	247 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	PGC1	Q08959	321 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	SFI1	Q12369	946 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	RTN2	Q12443	393 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	ZPS1	Q12512	249 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	YOR111W	Q99210	232 aa		4.2	□□□□□ -1.74
RCR2	YDR003W	MSF1	P08425	469 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	ILS1	P09436	1072 aa	Known RBP	4.19	□□□□□ -1.74
RCR2	YDR003W	CDC24	P11433	854 aa	Predicted RBP	4.19	□□□□□ -1.74
RCR2	YDR003W	PRP4	P20053	465 aa	Known RBP	4.19	□□□□□ -1.74
RCR2	YDR003W	SUI2	P20459	304 aa	Known RBP	4.19	□□□□□ -1.74
RCR2	YDR003W	KIN3	P22209	435 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	PRP22	P24384	1145 aa	Known RBP	4.19	□□□□□ -1.74
RCR2	YDR003W	ERG6	P25087	383 aa	Known RBP	4.19	□□□□□ -1.74
RCR2	YDR003W	PEP3	P27801	918 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	PRE4	P30657	266 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	MRP20	P32387	263 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	MIA40	P36046	403 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	FLO10	P36170	1169 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	TDP1	P38319	544 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	RIX1	P38883	763 aa	Predicted RBP	4.19	□□□□□ -1.74
RCR2	YDR003W	TIF34	P40217	347 aa	Known RBP	4.19	□□□□□ -1.74
RCR2	YDR003W	ASG1	P40467	964 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	FIS1	P40515	155 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	RPS0B	P46654	252 aa	Known RBP	4.19	□□□□□ -1.74
RCR2	YDR003W	FYV8	P46949	817 aa	Known RBP	4.19	□□□□□ -1.74
RCR2	YDR003W	MRX6	P48564	524 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	GPI8	P49018	411 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	TEL2	P53038	688 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	COG1	P53079	417 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	IMO32	P53219	342 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	DIP5	P53388	608 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	YDR131C	Q03899	556 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	PPN1	Q04119	674 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	VBA4	Q04602	768 aa	Known RBP	4.19	□□□□□ -1.74
RCR2	YDR003W	RPN8	Q08723	338 aa	Known RBP	4.19	□□□□□ -1.74
RCR2	YDR003W	CIR2	Q08822	631 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	TAF10	Q12030	206 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	NBP2	Q12163	236 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	ISA2	Q12425	185 aa		4.19	□□□□□ -1.74
RCR2	YDR003W	GAL4	P04386	881 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	PMS1	P14242	873 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	DAL82	P21705	255 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	MNE1	P24720	663 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	YCL042W	P25572	119 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	AAD3	P25612	363 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	RML2	P32611	393 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	YPT7	P32939	208 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	YKL100C	P34248	587 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	CDS1	P38221	457 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	CRG1	P38892	291 aa	RIP-Chip data	4.18	□□□□□ -1.74	not detected
RCR2	YDR003W	PSD1	P39006	500 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	VFA1	P40080	203 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	YJL068C	P40363	299 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	POL31	P46957	487 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	BIT61	P47041	543 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	BNI5	P53890	448 aa	Known RBP	4.18	□□□□□ -1.74
RCR2	YDR003W	ARG5,6	Q01217	863 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	NRG1	Q03125	231 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	RAD30	Q04049	632 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	AIM33	Q04516	312 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	YLR345W	Q06137	509 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	SMD2	Q06217	110 aa	Known RBP	4.18	□□□□□ -1.74
RCR2	YDR003W	BSP1	Q06604	576 aa		4.18	□□□□□ -1.74
RCR2	YDR003W	YLR415C	O13578	112 aa		4.17	□□□□□ -1.74
RCR2	YDR003W	COX3	P00420	269 aa		4.17	□□□□□ -1.74
RCR2	YDR003W	RPL1A	P0CX43	217 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms