RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	YPL283W-B	P0CX97	160 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	YPR204C-A	P0CX98	160 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	YAP1	P19880	650 aa	Known RBP	4.75	□□□□□ -1.65
RPC53	YDL150W	CNS1	P33313	385 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	ERC1	P38767	581 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	UBX6	P47049	396 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	BNA1	P47096	177 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	PSP1	P50896	841 aa	Known RBP	4.75	□□□□□ -1.65
RPC53	YDL150W	YGR079W	P53249	370 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	PIL1	P53252	339 aa	Known RBP	4.75	□□□□□ -1.65
RPC53	YDL150W	LSB1	P53281	241 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	SMD2	Q06217	110 aa	Known RBP	4.75	□□□□□ -1.65
RPC53	YDL150W	TPO3	Q06451	622 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	CYK3	Q07533	885 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	DSE3	Q08729	430 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	DAP1	Q12091	152 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	SWT1	Q12104	458 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	BAG7	Q12128	409 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	YPL150W	Q12152	901 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	RTP1	Q12751	981 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	TOR1	P35169	2470 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	CET1	O13297	549 aa	Predicted RBP	4.74	□□□□□ -1.65
RPC53	YDL150W	TY2A-LR1	P0C2J4	438 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	YMR085W	P0CF18	432 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	TY2A-F	P0CX61	438 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	TY2A-GR2	P0CX62	438 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	POX1	P13711	748 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	VPS1	P21576	704 aa	Known RBP	4.74	□□□□□ -1.65
RPC53	YDL150W	TY2A-C	P25383	438 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	RDS1	P25611	832 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
RPC53	YDL150W	HES1	P35843	434 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	KES1	P35844	434 aa	Known RBP	4.74	□□□□□ -1.65
RPC53	YDL150W	PXL1	P36166	706 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	VBA2	P38358	474 aa	Known RBP	4.74	□□□□□ -1.65
RPC53	YDL150W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
RPC53	YDL150W	SAP1	P39955	897 aa	Known RBP	4.74	□□□□□ -1.65
RPC53	YDL150W	YER010C	P40011	234 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	RIC1	P40395	1056 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	CFD1	P40558	293 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	COG1	P53079	417 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	HST1	P53685	503 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	SLD5	Q03406	294 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	TY2A-DR2	Q03483	438 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	YML053C	Q04978	212 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	VIP1	Q06685	1146 aa	Known RBP	4.74	□□□□□ -1.65
RPC53	YDL150W	TY2A-B	Q12260	438 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	TY2A-OR2	Q12293	438 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	TY2A-DR1	Q12392	438 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	TY2A-OR1	Q12439	438 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	TY2A-DR3	Q99303	438 aa		4.74	□□□□□ -1.65
RPC53	YDL150W	YPR089W	O13585	888 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	BI2	P03873	423 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	SES1	P07284	462 aa	Known RBP	4.73	□□□□□ -1.65
RPC53	YDL150W	MAK32	P23060	363 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	RRP43	P25359	394 aa	Predicted RBP	4.73	□□□□□ -1.65
RPC53	YDL150W	LAC1	P28496	418 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	MCM4	P30665	933 aa	Known RBP	4.73	□□□□□ -1.65
RPC53	YDL150W	SAS3	P34218	831 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	MAL33	P38157	468 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	NDT80	P38830	627 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	PHM8	P40025	321 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	YGL138C	P53122	345 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	YAT1	P80235	687 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	TRM8	Q12009	286 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	GET3	Q12154	354 aa	Known RBP	4.73	□□□□□ -1.65
RPC53	YDL150W	NBP2	Q12163	236 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	ERG27	Q12452	347 aa	Known RBP	4.73	□□□□□ -1.65
RPC53	YDL150W	NBL1	Q3E7Y6	73 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	Q0010	Q9ZZX9	128 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	RIF1	P29539	1916 aa		4.73	□□□□□ -1.65
RPC53	YDL150W	SAM1	P10659	382 aa	Known RBP	4.72	□□□□□ -1.65
RPC53	YDL150W	CBF2	P32504	956 aa		4.72	□□□□□ -1.65
RPC53	YDL150W	SWE1	P32944	819 aa		4.72	□□□□□ -1.65
RPC53	YDL150W	PHO88	P38264	188 aa	Predicted RBP	4.72	□□□□□ -1.65
RPC53	YDL150W	IRC7	P43623	340 aa		4.72	□□□□□ -1.65
RPC53	YDL150W	SGM1	P47166	707 aa		4.72	□□□□□ -1.65
RPC53	YDL150W	VID30	P53076	958 aa		4.72	□□□□□ -1.65
RPC53	YDL150W	COP1	P53622	1201 aa	Known RBP	4.72	□□□□□ -1.65
RPC53	YDL150W	BNI5	P53890	448 aa	Known RBP	4.72	□□□□□ -1.65
RPC53	YDL150W	CEX1	Q12453	761 aa		4.72	□□□□□ -1.65
RPC53	YDL150W	YLR302C	O13544	120 aa		4.71	□□□□□ -1.66
RPC53	YDL150W	COX1	P00401	534 aa		4.71	□□□□□ -1.66
RPC53	YDL150W	GUK1	P15454	187 aa	Known RBP	4.71	□□□□□ -1.66
RPC53	YDL150W	FRS2	P15625	503 aa	Known RBP	4.71	□□□□□ -1.66
RPC53	YDL150W	THR4	P16120	514 aa	Known RBP	4.71	□□□□□ -1.66
RPC53	YDL150W	MSP1	P28737	362 aa		4.71	□□□□□ -1.66
RPC53	YDL150W	TFC3	P34111	1160 aa		4.71	□□□□□ -1.66
RPC53	YDL150W	SHP1	P34223	423 aa		4.71	□□□□□ -1.66
RPC53	YDL150W	YIL024C	P40543	189 aa		4.71	□□□□□ -1.66
RPC53	YDL150W	HYR1	P40581	163 aa	Known RBP	4.71	□□□□□ -1.66
RPC53	YDL150W	FMS1	P50264	508 aa		4.71	□□□□□ -1.66
RPC53	YDL150W	YGL039W	P53183	348 aa	Known RBP	4.71	□□□□□ -1.66
RPC53	YDL150W	DCP2	P53550	970 aa	Known RBP	4.71	□□□□□ -1.66
RPC53	YDL150W	YPL071C	Q02864	156 aa		4.71	□□□□□ -1.66
RPC53	YDL150W	SVL3	Q03088	825 aa	Known RBP	4.71	□□□□□ -1.66
RPC53	YDL150W	VPS72	Q03388	795 aa		4.71	□□□□□ -1.66
RPC53	YDL150W	CSM3	Q04659	317 aa		4.71	□□□□□ -1.66
RPC53	YDL150W	TIP41	Q12199	356 aa		4.71	□□□□□ -1.66
RPC53	YDL150W	PCD1	Q12524	340 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms