RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W RPF2P36160 344 aaKnown RBP5.74□□□□□ -1.49
SHP1YBL058W SMF2P38778 549 aa5.74□□□□□ -1.49
SHP1YBL058W CHS7P38843 316 aa5.74□□□□□ -1.49
SHP1YBL058W PLB1P39105 664 aa5.74□□□□□ -1.49
SHP1YBL058W GIM4P40005 111 aaKnown RBP5.74□□□□□ -1.49
SHP1YBL058W YMR134WP40207 237 aa5.74□□□□□ -1.49
SHP1YBL058W SUT1P53032 299 aaKnown RBP5.74□□□□□ -1.49
SHP1YBL058W RSF1Q05043 376 aa5.74□□□□□ -1.49
SHP1YBL058W RRP45Q05636 305 aaKnown RBP5.74□□□□□ -1.49
SHP1YBL058W VTA1Q06263 330 aa5.74□□□□□ -1.49
SHP1YBL058W MET32Q12041 191 aa5.74□□□□□ -1.49
SHP1YBL058W LEU9Q12166 604 aaKnown RBP5.74□□□□□ -1.49
SHP1YBL058W QCR6P00127 147 aa5.73□□□□□ -1.49
SHP1YBL058W FUR1P18562 216 aaKnown RBP5.73□□□□□ -1.49
SHP1YBL058W SEC62P21825 274 aa5.73□□□□□ -1.49
SHP1YBL058W YCL068CP25593 260 aa5.73□□□□□ -1.49
SHP1YBL058W YCR099CP25657 155 aa5.73□□□□□ -1.49
SHP1YBL058W SIN4P32259 974 aa5.73□□□□□ -1.49
SHP1YBL058W SEF1P34228 1148 aa5.73□□□□□ -1.49
SHP1YBL058W MRP21P38175 177 aa5.73□□□□□ -1.49
SHP1YBL058W UBA4P38820 440 aa5.73□□□□□ -1.49
SHP1YBL058W SSN3P39073 555 aa5.73□□□□□ -1.49
SHP1YBL058W SEC9P40357 651 aa5.73□□□□□ -1.49
SHP1YBL058W DPH1P40487 425 aaKnown RBP5.73□□□□□ -1.49
SHP1YBL058W PXA1P41909 870 aa5.73□□□□□ -1.49
SHP1YBL058W YFL012WP43580 148 aa5.73□□□□□ -1.49
SHP1YBL058W OSW7P43611 510 aa5.73□□□□□ -1.49
SHP1YBL058W IKS1P47042 667 aa5.73□□□□□ -1.49
SHP1YBL058W NNF1P47149 201 aa5.73□□□□□ -1.49
SHP1YBL058W YGL260WP53056 76 aa5.73□□□□□ -1.49
SHP1YBL058W SGF73P53165 657 aa5.73□□□□□ -1.49
SHP1YBL058W CPR6P53691 371 aaKnown RBP5.73□□□□□ -1.49
SHP1YBL058W PET117Q02771 107 aa5.73□□□□□ -1.49
SHP1YBL058W PEX25Q02969 394 aa5.73□□□□□ -1.49
SHP1YBL058W YMR114CQ04471 368 aaKnown RBP5.73□□□□□ -1.49
SHP1YBL058W RSC3Q06639 885 aa5.73□□□□□ -1.49
SHP1YBL058W CDA1Q06702 301 aa5.73□□□□□ -1.49
SHP1YBL058W FAS1P07149 2051 aaKnown RBP5.73□□□□□ -1.49
SHP1YBL058W BCY1P07278 416 aaKnown RBP5.72□□□□□ -1.49
SHP1YBL058W NSP1P14907 823 aaKnown RBP5.72□□□□□ -1.49
SHP1YBL058W PRP2P20095 876 aaPredicted RBP5.72□□□□□ -1.49
SHP1YBL058W ROX1P25042 368 aa5.72□□□□□ -1.49
SHP1YBL058W ATP11P32453 318 aa5.72□□□□□ -1.49
SHP1YBL058W SMI1P32566 505 aa5.72□□□□□ -1.49
SHP1YBL058W YPT52P36018 234 aaKnown RBP5.72□□□□□ -1.49
SHP1YBL058W MRPL15P36523 253 aa5.72□□□□□ -1.49
SHP1YBL058W AHP1P38013 176 aaKnown RBP5.72□□□□□ -1.49
SHP1YBL058W MSG5P38590 489 aa5.72□□□□□ -1.49
SHP1YBL058W SCC4P40090 624 aa5.72□□□□□ -1.49
SHP1YBL058W YTA6P40328 754 aa5.72□□□□□ -1.49
SHP1YBL058W MDJ2P42834 146 aa5.72□□□□□ -1.49
SHP1YBL058W PFA3P42836 336 aa5.72□□□□□ -1.49
SHP1YBL058W RIM8P53179 542 aa5.72□□□□□ -1.49
SHP1YBL058W AAT1Q01802 451 aa5.72□□□□□ -1.49
SHP1YBL058W YDR109CQ04585 715 aa5.72□□□□□ -1.49
SHP1YBL058W YPL272CQ08984 517 aa5.72□□□□□ -1.49
SHP1YBL058W TMS1Q12116 473 aa5.72□□□□□ -1.49
SHP1YBL058W YPL066WQ12194 479 aa5.72□□□□□ -1.49
SHP1YBL058W LAG2Q92325 660 aa5.72□□□□□ -1.49
SHP1YBL058W PHO5P00635 467 aa5.71□□□□□ -1.5
SHP1YBL058W CDC4P07834 779 aa5.71□□□□□ -1.5
SHP1YBL058W IMA3P0CW40 589 aa5.71□□□□□ -1.5
SHP1YBL058W IMA4P0CW41 589 aa5.71□□□□□ -1.5
SHP1YBL058W INO1P11986 533 aa5.71□□□□□ -1.5
SHP1YBL058W HSP60P19882 572 aaKnown RBP5.71□□□□□ -1.5
SHP1YBL058W URA4P20051 364 aa5.71□□□□□ -1.5
SHP1YBL058W PHO3P24031 467 aa5.71□□□□□ -1.5
SHP1YBL058W MEI5P32489 222 aa5.71□□□□□ -1.5
SHP1YBL058W PEX5P35056 612 aa5.71□□□□□ -1.5
SHP1YBL058W LRG1P35688 1017 aa5.71□□□□□ -1.5
SHP1YBL058W PBP2P38151 413 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
SHP1YBL058W CTP1P38152 299 aa5.71□□□□□ -1.5
SHP1YBL058W YBR197CP38306 217 aa5.71□□□□□ -1.5
SHP1YBL058W MCX1P38323 520 aaPredicted RBP5.71□□□□□ -1.5
SHP1YBL058W MGE1P38523 228 aa5.71□□□□□ -1.5
SHP1YBL058W YHR045WP38775 560 aa5.71□□□□□ -1.5
SHP1YBL058W YHR210CP38893 341 aa5.71□□□□□ -1.5
SHP1YBL058W UTP18P40362 594 aaPredicted RBP5.71□□□□□ -1.5
SHP1YBL058W ELP2P42935 788 aa5.71□□□□□ -1.5
SHP1YBL058W YFR020WP43600 232 aa5.71□□□□□ -1.5
SHP1YBL058W TRM9P49957 279 aa5.71□□□□□ -1.5
SHP1YBL058W PEX8P53248 589 aa5.71□□□□□ -1.5
SHP1YBL058W ESF2P53743 316 aaKnown RBP5.71□□□□□ -1.5
SHP1YBL058W ALF1P53904 254 aa5.71□□□□□ -1.5
SHP1YBL058W NHX1Q04121 633 aa5.71□□□□□ -1.5
SHP1YBL058W TRM12Q04235 462 aa5.71□□□□□ -1.5
SHP1YBL058W TDA9Q04545 1251 aa5.71□□□□□ -1.5
SHP1YBL058W IMA2Q08295 589 aa5.71□□□□□ -1.5
SHP1YBL058W UPC2Q12151 913 aa5.71□□□□□ -1.5
SHP1YBL058W YOL107WQ12239 342 aa5.71□□□□□ -1.5
SHP1YBL058W GAL7P08431 366 aa5.7□□□□□ -1.5
SHP1YBL058W HOM3P10869 527 aa5.7□□□□□ -1.5
SHP1YBL058W LAT1P12695 482 aaKnown RBP5.7□□□□□ -1.5
SHP1YBL058W HSP26P15992 214 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
SHP1YBL058W RPB10P22139 70 aa5.7□□□□□ -1.5
SHP1YBL058W MGM101P32787 269 aaKnown RBP5.7□□□□□ -1.5
SHP1YBL058W TIP20P33891 701 aa5.7□□□□□ -1.5
SHP1YBL058W STO1P34160 861 aaKnown RBP5.7□□□□□ -1.5
SHP1YBL058W FTH1P38310 465 aa5.7□□□□□ -1.5
SHP1YBL058W RIM11P38615 370 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms