RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 FLT1P17948 1338 aa16.99■□□□□ 0.31
PTCH1-217ENST00000548420 TET1Q8NFU7 2136 aa16.99■□□□□ 0.31
PTCH1-217ENST00000548420 FOCADQ5VW36 1801 aa16.99■□□□□ 0.31
PTCH1-217ENST00000548420 B4GALT4O60513 344 aa16.99■□□□□ 0.31
PTCH1-217ENST00000548420 LDHCP07864 332 aa16.99■□□□□ 0.31
PTCH1-217ENST00000548420 GUCY1A2P33402 732 aa16.99■□□□□ 0.31
PTCH1-217ENST00000548420 GJA9P57773 515 aa16.99■□□□□ 0.31
PTCH1-217ENST00000548420 RAB3GAP1Q15042 981 aa16.99■□□□□ 0.31
PTCH1-217ENST00000548420 TATDN1Q6P1N9 297 aa16.99■□□□□ 0.31
PTCH1-217ENST00000548420 PI16Q6UXB8 463 aa16.99■□□□□ 0.31
PTCH1-217ENST00000548420 DEFB128Q7Z7B8 93 aa16.99■□□□□ 0.31
PTCH1-217ENST00000548420 SLC9A7Q96T83 725 aa16.99■□□□□ 0.31
PTCH1-217ENST00000548420 SAP30BPQ9UHR5 308 aaKnown RBP16.99■□□□□ 0.31
PTCH1-217ENST00000548420 DIS3Q9Y2L1 958 aaKnown RBP16.99■□□□□ 0.31
PTCH1-217ENST00000548420 A0A1W2PRG0 241 aa16.98■□□□□ 0.31
PTCH1-217ENST00000548420 DSG3P32926 999 aa16.98■□□□□ 0.31
PTCH1-217ENST00000548420 GNASQ5JWF2 1037 aa16.98■□□□□ 0.31
PTCH1-217ENST00000548420 PHOSPHO2Q8TCD6 241 aa16.98■□□□□ 0.31
PTCH1-217ENST00000548420 EDAQ92838 391 aa16.98■□□□□ 0.31
PTCH1-217ENST00000548420 PBXIP1Q96AQ6 731 aa16.98■□□□□ 0.31
PTCH1-217ENST00000548420 ATG4CQ96DT6 458 aa16.98■□□□□ 0.31
PTCH1-217ENST00000548420 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
PTCH1-217ENST00000548420 MMP19Q99542 508 aa16.98■□□□□ 0.31
PTCH1-217ENST00000548420 PRRX2Q99811 253 aa16.98■□□□□ 0.31
PTCH1-217ENST00000548420 CNPY2Q9Y2B0 182 aa16.98■□□□□ 0.31
PTCH1-217ENST00000548420 COL11A1P12107 1806 aaPredicted RBP16.98■□□□□ 0.31
PTCH1-217ENST00000548420 VPS13AQ96RL7 3174 aa16.97■□□□□ 0.31
PTCH1-217ENST00000548420 PROB1E7EW31 1015 aa16.97■□□□□ 0.31
PTCH1-217ENST00000548420 BEX3Q00994 111 aa16.97■□□□□ 0.31
PTCH1-217ENST00000548420 TMEM132BQ14DG7 1078 aa16.97■□□□□ 0.31
PTCH1-217ENST00000548420 PUS10Q3MIT2 529 aaKnown RBP16.97■□□□□ 0.31
PTCH1-217ENST00000548420 TNNI3KQ59H18 835 aa16.97■□□□□ 0.31
PTCH1-217ENST00000548420 TMCO2Q7Z6W1 182 aaPredicted RBP16.97■□□□□ 0.31
PTCH1-217ENST00000548420 ADHFE1Q8IWW8 467 aa16.97■□□□□ 0.31
PTCH1-217ENST00000548420 ATOH1Q92858 354 aaPredicted RBP16.97■□□□□ 0.31
PTCH1-217ENST00000548420 NEUROD6Q96NK8 337 aa16.97■□□□□ 0.31
PTCH1-217ENST00000548420 TRIM34Q9BYJ4 488 aa16.97■□□□□ 0.31
PTCH1-217ENST00000548420 PRKAG3Q9UGI9 489 aa16.97■□□□□ 0.31
PTCH1-217ENST00000548420 ZHX1Q9UKY1 873 aaPredicted RBP16.97■□□□□ 0.31
PTCH1-217ENST00000548420 FPGT-TNNI3KV9GXZ4 949 aa16.97■□□□□ 0.31
PTCH1-217ENST00000548420 MCM3APO60318 1980 aa16.97■□□□□ 0.31
PTCH1-217ENST00000548420 CHD8Q9HCK8 2581 aa16.96■□□□□ 0.31
PTCH1-217ENST00000548420 PARP14Q460N5 1801 aa16.96■□□□□ 0.31
PTCH1-217ENST00000548420 TMEM221A6NGB7 291 aa16.96■□□□□ 0.31
PTCH1-217ENST00000548420 M0R296 226 aa16.96■□□□□ 0.31
PTCH1-217ENST00000548420 ARID4AP29374 1257 aaPredicted RBP16.96■□□□□ 0.31
PTCH1-217ENST00000548420 VCPP55072 806 aaKnown RBP16.96■□□□□ 0.31
PTCH1-217ENST00000548420 GSTO1P78417 241 aa16.96■□□□□ 0.31
PTCH1-217ENST00000548420 CXCL17Q6UXB2 119 aa16.96■□□□□ 0.31
PTCH1-217ENST00000548420 AATFQ9NY61 560 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTCH1-217ENST00000548420 HMG20BQ9P0W2 317 aa16.96■□□□□ 0.31
PTCH1-217ENST00000548420 RBAK-RBAKDNI3L0D1 243 aa16.95■□□□□ 0.3
PTCH1-217ENST00000548420 ITGA7Q13683 1181 aa16.95■□□□□ 0.3
PTCH1-217ENST00000548420 ADGRA1Q86SQ6 560 aa16.95■□□□□ 0.3
PTCH1-217ENST00000548420 RNF135Q8IUD6 432 aa16.95■□□□□ 0.3
PTCH1-217ENST00000548420 MB21D1Q8N884 522 aa16.95■□□□□ 0.3
PTCH1-217ENST00000548420 TANGO6Q9C0B7 1094 aa16.95■□□□□ 0.3
PTCH1-217ENST00000548420 MTUS1Q9ULD2 1270 aa16.95■□□□□ 0.3
PTCH1-217ENST00000548420 TRPC6Q9Y210 931 aa16.95■□□□□ 0.3
PTCH1-217ENST00000548420 ASTN1O14525 1302 aa16.95■□□□□ 0.3
PTCH1-217ENST00000548420 CFAP47Q6ZTR5 3102 aa16.94■□□□□ 0.3
PTCH1-217ENST00000548420 PRR23AA6NEV1 266 aa16.94■□□□□ 0.3
PTCH1-217ENST00000548420 PFKMP08237 780 aa16.94■□□□□ 0.3
PTCH1-217ENST00000548420 NKX3-2P78367 333 aa16.94■□□□□ 0.3
PTCH1-217ENST00000548420 OS9Q13438 667 aaPredicted RBP16.94■□□□□ 0.3
PTCH1-217ENST00000548420 HSP90AB4PQ58FF6 505 aa16.94■□□□□ 0.3
PTCH1-217ENST00000548420 TRIM67Q6ZTA4 783 aa16.94■□□□□ 0.3
PTCH1-217ENST00000548420 ERC1Q8IUD2 1116 aa16.94■□□□□ 0.3
PTCH1-217ENST00000548420 EAF2Q96CJ1 260 aaPredicted RBP16.94■□□□□ 0.3
PTCH1-217ENST00000548420 ZNF512BQ96KM6 892 aaPredicted RBP16.94■□□□□ 0.3
PTCH1-217ENST00000548420 CNTNAP3BQ96NU0 1288 aa16.94■□□□□ 0.3
PTCH1-217ENST00000548420 CNTNAP3Q9BZ76 1288 aa16.94■□□□□ 0.3
PTCH1-217ENST00000548420 UPF3BQ9BZI7 483 aaKnown RBP16.94■□□□□ 0.3
PTCH1-217ENST00000548420 RAI14Q9P0K7 980 aa16.94■□□□□ 0.3
PTCH1-217ENST00000548420 DMXL1Q9Y485 3027 aa16.94■□□□□ 0.3
PTCH1-217ENST00000548420 PKD1L2Q7Z442 2459 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 CHD6Q8TD26 2715 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 WDR87Q6ZQQ6 2873 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 DNAH14Q0VDD8 3507 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 KIF28PB7ZC32 967 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 H0Y858 1186 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 HMMRO75330 724 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 PTGS1P23219 599 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 RRP1P56182 461 aaKnown RBP16.93■□□□□ 0.3
PTCH1-217ENST00000548420 CCDC144BQ3MJ40 725 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 MAMDC4Q6UXC1 1216 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 DBNDD2Q9BQY9 259 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 TLR9Q9NR96 1032 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 EXOC6BQ9Y2D4 811 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 MYO7AQ13402 2215 aa16.93■□□□□ 0.3
PTCH1-217ENST00000548420 SIP14410 1827 aa16.92■□□□□ 0.3
PTCH1-217ENST00000548420 SLC25A27O95847 323 aa16.92■□□□□ 0.3
PTCH1-217ENST00000548420 UQCRFS1P1P0C7P4 283 aa16.92■□□□□ 0.3
PTCH1-217ENST00000548420 CYP2C9P11712 490 aa16.92■□□□□ 0.3
PTCH1-217ENST00000548420 MCAMP43121 646 aa16.92■□□□□ 0.3
PTCH1-217ENST00000548420 PPP4CP60510 307 aa16.92■□□□□ 0.3
PTCH1-217ENST00000548420 ERVK-21P61565 698 aa16.92■□□□□ 0.3
PTCH1-217ENST00000548420 PSMC6P62333 389 aa16.92■□□□□ 0.3
PTCH1-217ENST00000548420 ACVR2BQ13705 512 aa16.92■□□□□ 0.3
PTCH1-217ENST00000548420 KCTD2Q14681 263 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms