RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Gm1661E9Q963 441 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Gm4841E9QAA8 417 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Tnnc2P20801 160 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Ighmbp2P40694 993 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Tfcp2l1Q3UNW5 479 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Zbtb7bQ64321 544 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Iws1Q8C1D8 766 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Atp6v1e2Q9D593 226 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Rsph3bQ9DA80 389 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Ehd4Q9EQP2 541 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Mkrn1Q9QXP6 481 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Cnbd1B1AWM0 430 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Krt39Q6IFX4 482 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Ankrd45Q810N6 248 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 BaatQ91X34 420 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Atp6v0a4Q920R6 833 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Ndufab1Q9CR21 156 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Krt71Q9R0H5 524 aa12.15□□□□□ -0.46
Scn8a-203ENSMUST00000108908 Gm45194A0A140LJG2 572 aa12.15□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Cyp2c67Q569X9 491 aa12.15□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Rgl1Q60695 768 aa12.15□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Cct6bQ61390 531 aa12.15□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Atad3Q925I1 591 aa12.15□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Zfp174B9EJW5 407 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Xrcc5P27641 732 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Atp1a1Q8VDN2 1023 aaKnown RBP12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Drc3Q9D5E4 523 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Vti1aO89116 217 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Ddx41Q91VN6 622 aaKnown RBP12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 DexiQ9WUQ7 95 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Actn3O88990 900 aaKnown RBP12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Cct5P80316 541 aaKnown RBP12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 AsnsQ61024 561 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Lrrc41Q8K1C9 807 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 StrbpQ91WM1 672 aaKnown RBP12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 SncbQ91ZZ3 133 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 PtprtQ99M80 1454 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Prss51A0A286YDY8 319 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 YwhaeP62259 255 aaKnown RBP12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Glra4Q61603 456 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Rasgrp4Q8BTM9 673 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Ankrd49Q8VE42 238 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Copb1Q9JIF7 953 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Cpsf2O35218 782 aaKnown RBP12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Mnat1P51949 309 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Fam228bQ497Q6 232 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Fgd5Q80UZ0 1219 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Kcnv2Q8CFS6 562 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Golga1Q9CW79 758 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Mms19Q9D071 1031 aa12.14□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Ccdc13D3YV10 709 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Rbm12b2Q66JV4 834 aaKnown RBP12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Slc26a7Q8R2Z3 656 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Nup58Q8R332 587 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Eaf2Q91ZD6 262 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Stmn2P55821 179 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Hace1Q3U0D9 909 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Retreg2Q6NS82 541 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Pja2Q80U04 707 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Spata31d1bE9QA57 1361 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Lcmt1A0A0U1RNF2 332 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 SkiQ60698 725 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Mylk2Q8VCR8 613 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Strn3Q9ERG2 796 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Rps6ka2Q9WUT3 733 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Klhl34A2AI76 644 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Bfsp1A2AMT1 669 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Gdap1O88741 358 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 PsdQ5DTT2 1024 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Kiaa1841Q68FF0 718 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Trim56Q80VI1 734 aaKnown RBP12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Mrpl50Q8VDT9 159 aaKnown RBP12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Esyt2Q3TZZ7 845 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Foxd4Q60688 444 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Dzip3Q7TPV2 1204 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 IarsQ8BU30 1262 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Dnajc17Q91WT4 303 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 CsadQ9DBE0 493 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Fndc3aQ8BX90 1198 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Sh2b1Q91ZM2 756 aa12.13□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Kcnb2A6H8H5 907 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Pstpip2Q99M15 334 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Glrx3Q9CQM9 337 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Rmi1Q9D4G9 616 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Rilpl1Q9JJC6 406 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Ifi207E9Q3L4 978 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Ncf2O70145 525 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Igsf3Q6ZQA6 1194 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Ppp4r4Q8C0Y0 875 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Prkag2Q91WG5 566 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Myo5cE9Q1F5 1742 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Mroh8E9PYI4 1049 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Xrcc6P23475 608 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Polr2fP61219 127 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Sap130Q8BIH0 1057 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Slc4a7Q8BTY2 1034 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Pde6cQ91ZQ1 861 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Snrnp35Q9D384 244 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 IcoslgQ9JHJ8 322 aa12.12□□□□□ -0.47
Scn8a-203ENSMUST00000108908 Add2Q9QYB8 725 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 681.2 ms