Protein–RNA interactions for Protein: Q8BX90

Fndc3a, Fibronectin type-III domain-containing protein 3A, mousemouse

Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc3aQ8BX90 Gm25239-201ENSMUST00000174915 86 ntBASIC40,64■■■■■ 4,1
Fndc3aQ8BX90 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37,65■■■■□ 3,62
Fndc3aQ8BX90 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37,12■■■■□ 3,53
Fndc3aQ8BX90 Gm15042-201ENSMUST00000120212 883 ntBASIC35,44■■■■□ 3,26
Fndc3aQ8BX90 Gm24109-201ENSMUST00000175489 103 ntBASIC35,28■■■■□ 3,24
Fndc3aQ8BX90 Gm15045-201ENSMUST00000117359 883 ntBASIC34,57■■■■□ 3,12
Fndc3aQ8BX90 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34,48■■■■□ 3,11
Fndc3aQ8BX90 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34,32■■■■□ 3,09
Fndc3aQ8BX90 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34,27■■■■□ 3,08
Fndc3aQ8BX90 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34,26■■■■□ 3,08
Fndc3aQ8BX90 Gm23366-201ENSMUST00000175022 89 ntBASIC33,95■■■■□ 3,03
Fndc3aQ8BX90 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33,79■■■■□ 3
Fndc3aQ8BX90 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33,75■■■□□ 2,99
Fndc3aQ8BX90 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33,2■■■□□ 2,9
Fndc3aQ8BX90 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33,02■■■□□ 2,88
Fndc3aQ8BX90 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32,94■■■□□ 2,86
Fndc3aQ8BX90 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32,7■■■□□ 2,83
Fndc3aQ8BX90 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32,69■■■□□ 2,82
Fndc3aQ8BX90 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32,64■■■□□ 2,82
Fndc3aQ8BX90 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32,64■■■□□ 2,82
Fndc3aQ8BX90 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32,56■■■□□ 2,8
Fndc3aQ8BX90 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32,49■■■□□ 2,79
Fndc3aQ8BX90 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32,43■■■□□ 2,78
Fndc3aQ8BX90 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32,37■■■□□ 2,77
Fndc3aQ8BX90 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32,21■■■□□ 2,75
Fndc3aQ8BX90 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32,18■■■□□ 2,74
Fndc3aQ8BX90 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32,17■■■□□ 2,74
Fndc3aQ8BX90 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,15■■■□□ 2,74
Fndc3aQ8BX90 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32,13■■■□□ 2,73
Fndc3aQ8BX90 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32,12■■■□□ 2,73
Fndc3aQ8BX90 Gm25238-201ENSMUST00000174914 89 ntBASIC32,07■■■□□ 2,72
Fndc3aQ8BX90 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,05■■■□□ 2,72
Fndc3aQ8BX90 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31,82■■■□□ 2,68
Fndc3aQ8BX90 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31,78■■■□□ 2,68
Fndc3aQ8BX90 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31,73■■■□□ 2,67
Fndc3aQ8BX90 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31,53■■■□□ 2,64
Fndc3aQ8BX90 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31,44■■■□□ 2,62
Fndc3aQ8BX90 Psd-208ENSMUST00000224556 2034 ntBASIC31,44■■■□□ 2,62
Fndc3aQ8BX90 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31,32■■■□□ 2,6
Fndc3aQ8BX90 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31,29■■■□□ 2,6
Fndc3aQ8BX90 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31,26■■■□□ 2,59
Fndc3aQ8BX90 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31,21■■■□□ 2,59
Fndc3aQ8BX90 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31,03■■■□□ 2,56
Fndc3aQ8BX90 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2,55
Fndc3aQ8BX90 Gm27325-201ENSMUST00000175467 74 ntBASIC30,98■■■□□ 2,55
Fndc3aQ8BX90 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30,93■■■□□ 2,54
Fndc3aQ8BX90 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30,91■■■□□ 2,54
Fndc3aQ8BX90 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30,89■■■□□ 2,54
Fndc3aQ8BX90 Gm25262-201ENSMUST00000174934 133 ntBASIC30,84■■■□□ 2,53
Fndc3aQ8BX90 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30,78■■■□□ 2,52
Fndc3aQ8BX90 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30,68■■■□□ 2,5
Fndc3aQ8BX90 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30,62■■■□□ 2,49
Fndc3aQ8BX90 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30,61■■■□□ 2,49
Fndc3aQ8BX90 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30,54■■■□□ 2,48
Fndc3aQ8BX90 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30,53■■■□□ 2,48
Fndc3aQ8BX90 Rab21-202ENSMUST00000218831 843 ntBASIC30,52■■■□□ 2,48
Fndc3aQ8BX90 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30,46■■■□□ 2,47
Fndc3aQ8BX90 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30,44■■■□□ 2,46
Fndc3aQ8BX90 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30,39■■■□□ 2,46
Fndc3aQ8BX90 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30,32■■■□□ 2,44
Fndc3aQ8BX90 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30,29■■■□□ 2,44
Fndc3aQ8BX90 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30,27■■■□□ 2,44
Fndc3aQ8BX90 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30,26■■■□□ 2,43
Fndc3aQ8BX90 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30,25■■■□□ 2,43
Fndc3aQ8BX90 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Fndc3aQ8BX90 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30,17■■■□□ 2,42
Fndc3aQ8BX90 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30,12■■■□□ 2,41
Fndc3aQ8BX90 Gm26115-201ENSMUST00000175605 87 ntBASIC30,11■■■□□ 2,41
Fndc3aQ8BX90 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30,11■■■□□ 2,41
Fndc3aQ8BX90 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30,07■■■□□ 2,4
Fndc3aQ8BX90 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30,05■■■□□ 2,4
Fndc3aQ8BX90 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30,05■■■□□ 2,4
Fndc3aQ8BX90 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30,04■■■□□ 2,4
Fndc3aQ8BX90 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30,01■■■□□ 2,39
Fndc3aQ8BX90 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Fndc3aQ8BX90 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29,98■■■□□ 2,39
Fndc3aQ8BX90 Gm8109-201ENSMUST00000194076 746 ntBASIC29,94■■■□□ 2,38
Fndc3aQ8BX90 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29,93■■■□□ 2,38
Fndc3aQ8BX90 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29,92■■■□□ 2,38
Fndc3aQ8BX90 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29,9■■■□□ 2,38
Fndc3aQ8BX90 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29,9■■■□□ 2,38
Fndc3aQ8BX90 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29,88■■■□□ 2,37
Fndc3aQ8BX90 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29,85■■■□□ 2,37
Fndc3aQ8BX90 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29,8■■■□□ 2,36
Fndc3aQ8BX90 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29,77■■■□□ 2,36
Fndc3aQ8BX90 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29,76■■■□□ 2,35
Fndc3aQ8BX90 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29,75■■■□□ 2,35
Fndc3aQ8BX90 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29,74■■■□□ 2,35
Fndc3aQ8BX90 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29,74■■■□□ 2,35
Fndc3aQ8BX90 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29,72■■■□□ 2,35
Fndc3aQ8BX90 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29,68■■■□□ 2,34
Fndc3aQ8BX90 Gm10524-201ENSMUST00000181931 1893 ntBASIC29,68■■■□□ 2,34
Fndc3aQ8BX90 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29,65■■■□□ 2,34
Fndc3aQ8BX90 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29,65■■■□□ 2,34
Fndc3aQ8BX90 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29,63■■■□□ 2,33
Fndc3aQ8BX90 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29,54■■■□□ 2,32
Fndc3aQ8BX90 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29,54■■■□□ 2,32
Fndc3aQ8BX90 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Fndc3aQ8BX90 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29,51■■■□□ 2,31
Fndc3aQ8BX90 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29,5■■■□□ 2,31
Retrieved 100 of 76,532 protein–RNA pairs in 17,7 ms