Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Gm25239-201ENSMUST00000174915 86 ntBASIC37,13■■■■□ 3,53
Ppp4r4Q8C0Y0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34,22■■■■□ 3,07
Ppp4r4Q8C0Y0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33,77■■■■□ 3
Ppp4r4Q8C0Y0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33,57■■■□□ 2,96
Ppp4r4Q8C0Y0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32,74■■■□□ 2,83
Ppp4r4Q8C0Y0 Gm15042-201ENSMUST00000120212 883 ntBASIC32,73■■■□□ 2,83
Ppp4r4Q8C0Y0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32,37■■■□□ 2,77
Ppp4r4Q8C0Y0 Gm24109-201ENSMUST00000175489 103 ntBASIC32,02■■■□□ 2,72
Ppp4r4Q8C0Y0 Gm15045-201ENSMUST00000117359 883 ntBASIC32■■■□□ 2,71
Ppp4r4Q8C0Y0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31,69■■■□□ 2,66
Ppp4r4Q8C0Y0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31,45■■■□□ 2,63
Ppp4r4Q8C0Y0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31,28■■■□□ 2,6
Ppp4r4Q8C0Y0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31,12■■■□□ 2,57
Ppp4r4Q8C0Y0 Gm23366-201ENSMUST00000175022 89 ntBASIC31,05■■■□□ 2,56
Ppp4r4Q8C0Y0 Psd-208ENSMUST00000224556 2034 ntBASIC31,02■■■□□ 2,56
Ppp4r4Q8C0Y0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30,95■■■□□ 2,55
Ppp4r4Q8C0Y0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30,85■■■□□ 2,53
Ppp4r4Q8C0Y0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30,73■■■□□ 2,51
Ppp4r4Q8C0Y0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30,62■■■□□ 2,49
Ppp4r4Q8C0Y0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,61■■■□□ 2,49
Ppp4r4Q8C0Y0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30,53■■■□□ 2,48
Ppp4r4Q8C0Y0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30,45■■■□□ 2,47
Ppp4r4Q8C0Y0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30,42■■■□□ 2,46
Ppp4r4Q8C0Y0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30,4■■■□□ 2,46
Ppp4r4Q8C0Y0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30,24■■■□□ 2,43
Ppp4r4Q8C0Y0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30,18■■■□□ 2,42
Ppp4r4Q8C0Y0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30,12■■■□□ 2,41
Ppp4r4Q8C0Y0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30,11■■■□□ 2,41
Ppp4r4Q8C0Y0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30,1■■■□□ 2,41
Ppp4r4Q8C0Y0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30,03■■■□□ 2,4
Ppp4r4Q8C0Y0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30,03■■■□□ 2,4
Ppp4r4Q8C0Y0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Ppp4r4Q8C0Y0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29,75■■■□□ 2,35
Ppp4r4Q8C0Y0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29,74■■■□□ 2,35
Ppp4r4Q8C0Y0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29,7■■■□□ 2,35
Ppp4r4Q8C0Y0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29,69■■■□□ 2,34
Ppp4r4Q8C0Y0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29,46■■■□□ 2,31
Ppp4r4Q8C0Y0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29,43■■■□□ 2,3
Ppp4r4Q8C0Y0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29,33■■■□□ 2,29
Ppp4r4Q8C0Y0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29,32■■■□□ 2,28
Ppp4r4Q8C0Y0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29,3■■■□□ 2,28
Ppp4r4Q8C0Y0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29,28■■■□□ 2,28
Ppp4r4Q8C0Y0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29,25■■■□□ 2,27
Ppp4r4Q8C0Y0 Gm25238-201ENSMUST00000174914 89 ntBASIC29,2■■■□□ 2,26
Ppp4r4Q8C0Y0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29,2■■■□□ 2,26
Ppp4r4Q8C0Y0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29,18■■■□□ 2,26
Ppp4r4Q8C0Y0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29,15■■■□□ 2,26
Ppp4r4Q8C0Y0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29,08■■■□□ 2,25
Ppp4r4Q8C0Y0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29,02■■■□□ 2,24
Ppp4r4Q8C0Y0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28,93■■■□□ 2,22
Ppp4r4Q8C0Y0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28,92■■■□□ 2,22
Ppp4r4Q8C0Y0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,89■■■□□ 2,21
Ppp4r4Q8C0Y0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28,84■■■□□ 2,21
Ppp4r4Q8C0Y0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28,82■■■□□ 2,2
Ppp4r4Q8C0Y0 Gm10524-201ENSMUST00000181931 1893 ntBASIC28,72■■■□□ 2,19
Ppp4r4Q8C0Y0 Gm27325-201ENSMUST00000175467 74 ntBASIC28,68■■■□□ 2,18
Ppp4r4Q8C0Y0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28,68■■■□□ 2,18
Ppp4r4Q8C0Y0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28,68■■■□□ 2,18
Ppp4r4Q8C0Y0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
Ppp4r4Q8C0Y0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28,58■■■□□ 2,17
Ppp4r4Q8C0Y0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28,56■■■□□ 2,16
Ppp4r4Q8C0Y0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28,55■■■□□ 2,16
Ppp4r4Q8C0Y0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
Ppp4r4Q8C0Y0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28,45■■■□□ 2,14
Ppp4r4Q8C0Y0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28,43■■■□□ 2,14
Ppp4r4Q8C0Y0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28,42■■■□□ 2,14
Ppp4r4Q8C0Y0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28,41■■■□□ 2,14
Ppp4r4Q8C0Y0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28,37■■■□□ 2,13
Ppp4r4Q8C0Y0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28,33■■■□□ 2,13
Ppp4r4Q8C0Y0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28,33■■■□□ 2,13
Ppp4r4Q8C0Y0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28,32■■■□□ 2,12
Ppp4r4Q8C0Y0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28,31■■■□□ 2,12
Ppp4r4Q8C0Y0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28,27■■■□□ 2,12
Ppp4r4Q8C0Y0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28,26■■■□□ 2,11
Ppp4r4Q8C0Y0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28,26■■■□□ 2,11
Ppp4r4Q8C0Y0 Gm42596-201ENSMUST00000196305 1958 ntBASIC28,2■■■□□ 2,1
Ppp4r4Q8C0Y0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28,19■■■□□ 2,1
Ppp4r4Q8C0Y0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28,13■■■□□ 2,09
Ppp4r4Q8C0Y0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28,08■■■□□ 2,09
Ppp4r4Q8C0Y0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28,06■■■□□ 2,08
Ppp4r4Q8C0Y0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28,05■■■□□ 2,08
Ppp4r4Q8C0Y0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28,02■■■□□ 2,08
Ppp4r4Q8C0Y0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28,02■■■□□ 2,08
Ppp4r4Q8C0Y0 Rab21-202ENSMUST00000218831 843 ntBASIC28■■■□□ 2,07
Ppp4r4Q8C0Y0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27,98■■■□□ 2,07
Ppp4r4Q8C0Y0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27,94■■■□□ 2,06
Ppp4r4Q8C0Y0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27,89■■■□□ 2,06
Ppp4r4Q8C0Y0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27,89■■■□□ 2,05
Ppp4r4Q8C0Y0 Gm25262-201ENSMUST00000174934 133 ntBASIC27,86■■■□□ 2,05
Ppp4r4Q8C0Y0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27,8■■■□□ 2,04
Ppp4r4Q8C0Y0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27,79■■■□□ 2,04
Ppp4r4Q8C0Y0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27,76■■■□□ 2,03
Ppp4r4Q8C0Y0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27,75■■■□□ 2,03
Ppp4r4Q8C0Y0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27,71■■■□□ 2,03
Ppp4r4Q8C0Y0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27,69■■■□□ 2,02
Ppp4r4Q8C0Y0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27,69■■■□□ 2,02
Ppp4r4Q8C0Y0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27,65■■■□□ 2,02
Ppp4r4Q8C0Y0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27,65■■■□□ 2,02
Ppp4r4Q8C0Y0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27,63■■■□□ 2,01
Ppp4r4Q8C0Y0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC27,62■■■□□ 2,01
Retrieved 100 of 76,532 protein–RNA pairs in 20,4 ms