Protein–RNA interactions for Protein: B1AWM0

Cnbd1, Cyclic nucleotide-binding domain-containing 1 (Fragment), mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnbd1B1AWM0 Gm25239-201ENSMUST00000174915 86 ntBASIC38,48■■■■□ 3,75
Cnbd1B1AWM0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37,64■■■■□ 3,62
Cnbd1B1AWM0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36,33■■■■□ 3,41
Cnbd1B1AWM0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36,31■■■■□ 3,4
Cnbd1B1AWM0 Psd-208ENSMUST00000224556 2034 ntBASIC35,24■■■■□ 3,23
Cnbd1B1AWM0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35,22■■■■□ 3,23
Cnbd1B1AWM0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34,88■■■■□ 3,17
Cnbd1B1AWM0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34,57■■■■□ 3,12
Cnbd1B1AWM0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34,54■■■■□ 3,12
Cnbd1B1AWM0 Gm15042-201ENSMUST00000120212 883 ntBASIC34,35■■■■□ 3,09
Cnbd1B1AWM0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34,23■■■■□ 3,07
Cnbd1B1AWM0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34,11■■■■□ 3,05
Cnbd1B1AWM0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33,85■■■■□ 3,01
Cnbd1B1AWM0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33,7■■■□□ 2,99
Cnbd1B1AWM0 Gm15045-201ENSMUST00000117359 883 ntBASIC33,7■■■□□ 2,99
Cnbd1B1AWM0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33,68■■■□□ 2,98
Cnbd1B1AWM0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33,64■■■□□ 2,98
Cnbd1B1AWM0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33,52■■■□□ 2,96
Cnbd1B1AWM0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33,14■■■□□ 2,9
Cnbd1B1AWM0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33,09■■■□□ 2,89
Cnbd1B1AWM0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33,07■■■□□ 2,88
Cnbd1B1AWM0 Gm24109-201ENSMUST00000175489 103 ntBASIC33■■■□□ 2,87
Cnbd1B1AWM0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32,98■■■□□ 2,87
Cnbd1B1AWM0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32,8■■■□□ 2,84
Cnbd1B1AWM0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32,79■■■□□ 2,84
Cnbd1B1AWM0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32,63■■■□□ 2,81
Cnbd1B1AWM0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32,63■■■□□ 2,81
Cnbd1B1AWM0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,63■■■□□ 2,81
Cnbd1B1AWM0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32,51■■■□□ 2,8
Cnbd1B1AWM0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32,51■■■□□ 2,79
Cnbd1B1AWM0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,5■■■□□ 2,79
Cnbd1B1AWM0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32,49■■■□□ 2,79
Cnbd1B1AWM0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32,45■■■□□ 2,79
Cnbd1B1AWM0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32,44■■■□□ 2,78
Cnbd1B1AWM0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32,41■■■□□ 2,78
Cnbd1B1AWM0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32,33■■■□□ 2,77
Cnbd1B1AWM0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32,27■■■□□ 2,76
Cnbd1B1AWM0 Gm23366-201ENSMUST00000175022 89 ntBASIC32,27■■■□□ 2,76
Cnbd1B1AWM0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32,19■■■□□ 2,74
Cnbd1B1AWM0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32,18■■■□□ 2,74
Cnbd1B1AWM0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32,08■■■□□ 2,73
Cnbd1B1AWM0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32,05■■■□□ 2,72
Cnbd1B1AWM0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2,71
Cnbd1B1AWM0 Gm10524-201ENSMUST00000181931 1893 ntBASIC31,9■■■□□ 2,7
Cnbd1B1AWM0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31,84■■■□□ 2,69
Cnbd1B1AWM0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31,82■■■□□ 2,68
Cnbd1B1AWM0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31,77■■■□□ 2,68
Cnbd1B1AWM0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31,61■■■□□ 2,65
Cnbd1B1AWM0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31,6■■■□□ 2,65
Cnbd1B1AWM0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31,58■■■□□ 2,65
Cnbd1B1AWM0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31,56■■■□□ 2,64
Cnbd1B1AWM0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31,54■■■□□ 2,64
Cnbd1B1AWM0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31,41■■■□□ 2,62
Cnbd1B1AWM0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31,38■■■□□ 2,61
Cnbd1B1AWM0 Gm42596-201ENSMUST00000196305 1958 ntBASIC31,37■■■□□ 2,61
Cnbd1B1AWM0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31,19■■■□□ 2,58
Cnbd1B1AWM0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31,18■■■□□ 2,58
Cnbd1B1AWM0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31,14■■■□□ 2,58
Cnbd1B1AWM0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31,13■■■□□ 2,57
Cnbd1B1AWM0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31,12■■■□□ 2,57
Cnbd1B1AWM0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31,09■■■□□ 2,57
Cnbd1B1AWM0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31,08■■■□□ 2,57
Cnbd1B1AWM0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31,04■■■□□ 2,56
Cnbd1B1AWM0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30,98■■■□□ 2,55
Cnbd1B1AWM0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30,94■■■□□ 2,54
Cnbd1B1AWM0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30,88■■■□□ 2,53
Cnbd1B1AWM0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30,87■■■□□ 2,53
Cnbd1B1AWM0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30,84■■■□□ 2,53
Cnbd1B1AWM0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30,75■■■□□ 2,51
Cnbd1B1AWM0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30,71■■■□□ 2,51
Cnbd1B1AWM0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30,65■■■□□ 2,5
Cnbd1B1AWM0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30,63■■■□□ 2,49
Cnbd1B1AWM0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30,62■■■□□ 2,49
Cnbd1B1AWM0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30,58■■■□□ 2,49
Cnbd1B1AWM0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30,56■■■□□ 2,48
Cnbd1B1AWM0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30,52■■■□□ 2,48
Cnbd1B1AWM0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Cnbd1B1AWM0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30,45■■■□□ 2,47
Cnbd1B1AWM0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30,43■■■□□ 2,46
Cnbd1B1AWM0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30,42■■■□□ 2,46
Cnbd1B1AWM0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Cnbd1B1AWM0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30,39■■■□□ 2,46
Cnbd1B1AWM0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30,33■■■□□ 2,45
Cnbd1B1AWM0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Cnbd1B1AWM0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30,28■■■□□ 2,44
Cnbd1B1AWM0 Gm27325-201ENSMUST00000175467 74 ntBASIC30,25■■■□□ 2,43
Cnbd1B1AWM0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30,24■■■□□ 2,43
Cnbd1B1AWM0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30,24■■■□□ 2,43
Cnbd1B1AWM0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30,2■■■□□ 2,43
Cnbd1B1AWM0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30,15■■■□□ 2,42
Cnbd1B1AWM0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30,13■■■□□ 2,41
Cnbd1B1AWM0 Gm25238-201ENSMUST00000174914 89 ntBASIC30,13■■■□□ 2,41
Cnbd1B1AWM0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30,1■■■□□ 2,41
Cnbd1B1AWM0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30,06■■■□□ 2,4
Cnbd1B1AWM0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30,06■■■□□ 2,4
Cnbd1B1AWM0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30,06■■■□□ 2,4
Cnbd1B1AWM0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Cnbd1B1AWM0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30,02■■■□□ 2,4
Cnbd1B1AWM0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29,99■■■□□ 2,39
Cnbd1B1AWM0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Retrieved 100 of 76,532 protein–RNA pairs in 11,2 ms