Protein–RNA interactions for Protein: B1AWM0

Cnbd1, Cyclic nucleotide-binding domain-containing 1 (Fragment), mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnbd1B1AWM0 Gm25239-201ENSMUST00000174915 86 ntBASIC38.48■■■■□ 3.75
Cnbd1B1AWM0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Cnbd1B1AWM0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
Cnbd1B1AWM0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.31■■■■□ 3.4
Cnbd1B1AWM0 Psd-208ENSMUST00000224556 2034 ntBASIC35.24■■■■□ 3.23
Cnbd1B1AWM0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
Cnbd1B1AWM0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
Cnbd1B1AWM0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Cnbd1B1AWM0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Cnbd1B1AWM0 Gm15042-201ENSMUST00000120212 883 ntBASIC34.35■■■■□ 3.09
Cnbd1B1AWM0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.23■■■■□ 3.07
Cnbd1B1AWM0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Cnbd1B1AWM0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Cnbd1B1AWM0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
Cnbd1B1AWM0 Gm15045-201ENSMUST00000117359 883 ntBASIC33.7■■■□□ 2.99
Cnbd1B1AWM0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Cnbd1B1AWM0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Cnbd1B1AWM0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.52■■■□□ 2.96
Cnbd1B1AWM0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Cnbd1B1AWM0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Cnbd1B1AWM0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Cnbd1B1AWM0 Gm24109-201ENSMUST00000175489 103 ntBASIC33■■■□□ 2.87
Cnbd1B1AWM0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
Cnbd1B1AWM0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Cnbd1B1AWM0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Cnbd1B1AWM0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cnbd1B1AWM0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cnbd1B1AWM0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
Cnbd1B1AWM0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Cnbd1B1AWM0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.51■■■□□ 2.79
Cnbd1B1AWM0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
Cnbd1B1AWM0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
Cnbd1B1AWM0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Cnbd1B1AWM0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
Cnbd1B1AWM0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Cnbd1B1AWM0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.33■■■□□ 2.77
Cnbd1B1AWM0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Cnbd1B1AWM0 Gm23366-201ENSMUST00000175022 89 ntBASIC32.27■■■□□ 2.76
Cnbd1B1AWM0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.19■■■□□ 2.74
Cnbd1B1AWM0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Cnbd1B1AWM0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Cnbd1B1AWM0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cnbd1B1AWM0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cnbd1B1AWM0 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.9■■■□□ 2.7
Cnbd1B1AWM0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cnbd1B1AWM0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cnbd1B1AWM0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.77■■■□□ 2.68
Cnbd1B1AWM0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Cnbd1B1AWM0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Cnbd1B1AWM0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.58■■■□□ 2.65
Cnbd1B1AWM0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.56■■■□□ 2.64
Cnbd1B1AWM0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Cnbd1B1AWM0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Cnbd1B1AWM0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cnbd1B1AWM0 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.37■■■□□ 2.61
Cnbd1B1AWM0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Cnbd1B1AWM0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cnbd1B1AWM0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
Cnbd1B1AWM0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Cnbd1B1AWM0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Cnbd1B1AWM0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Cnbd1B1AWM0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cnbd1B1AWM0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Cnbd1B1AWM0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.98■■■□□ 2.55
Cnbd1B1AWM0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Cnbd1B1AWM0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Cnbd1B1AWM0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Cnbd1B1AWM0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Cnbd1B1AWM0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Cnbd1B1AWM0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Cnbd1B1AWM0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Cnbd1B1AWM0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Cnbd1B1AWM0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Cnbd1B1AWM0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Cnbd1B1AWM0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Cnbd1B1AWM0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.52■■■□□ 2.48
Cnbd1B1AWM0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Cnbd1B1AWM0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.45■■■□□ 2.47
Cnbd1B1AWM0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.43■■■□□ 2.46
Cnbd1B1AWM0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Cnbd1B1AWM0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Cnbd1B1AWM0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Cnbd1B1AWM0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.33■■■□□ 2.45
Cnbd1B1AWM0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Cnbd1B1AWM0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Cnbd1B1AWM0 Gm27325-201ENSMUST00000175467 74 ntBASIC30.25■■■□□ 2.43
Cnbd1B1AWM0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Cnbd1B1AWM0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Cnbd1B1AWM0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Cnbd1B1AWM0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Cnbd1B1AWM0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Cnbd1B1AWM0 Gm25238-201ENSMUST00000174914 89 ntBASIC30.13■■■□□ 2.41
Cnbd1B1AWM0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Cnbd1B1AWM0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Cnbd1B1AWM0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.06■■■□□ 2.4
Cnbd1B1AWM0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.06■■■□□ 2.4
Cnbd1B1AWM0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Cnbd1B1AWM0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Cnbd1B1AWM0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Cnbd1B1AWM0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms