Protein–RNA interactions for Protein: Q920R6

Atp6v0a4, V-type proton ATPase 116 kDa subunit a isoform 4, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v0a4Q920R6 Gm25239-201ENSMUST00000174915 86 ntBASIC41.59■■■■■ 4.25
Atp6v0a4Q920R6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.48■■■■□ 3.75
Atp6v0a4Q920R6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Atp6v0a4Q920R6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
Atp6v0a4Q920R6 Gm15042-201ENSMUST00000120212 883 ntBASIC36.29■■■■□ 3.4
Atp6v0a4Q920R6 Gm24109-201ENSMUST00000175489 103 ntBASIC36.04■■■■□ 3.36
Atp6v0a4Q920R6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Atp6v0a4Q920R6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.52■■■■□ 3.28
Atp6v0a4Q920R6 Gm15045-201ENSMUST00000117359 883 ntBASIC35.44■■■■□ 3.26
Atp6v0a4Q920R6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Atp6v0a4Q920R6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.14■■■■□ 3.22
Atp6v0a4Q920R6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.07■■■■□ 3.2
Atp6v0a4Q920R6 Gm23366-201ENSMUST00000175022 89 ntBASIC34.78■■■■□ 3.16
Atp6v0a4Q920R6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Atp6v0a4Q920R6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Atp6v0a4Q920R6 Psd-208ENSMUST00000224556 2034 ntBASIC34.03■■■■□ 3.04
Atp6v0a4Q920R6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Atp6v0a4Q920R6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.79■■■■□ 3
Atp6v0a4Q920R6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Atp6v0a4Q920R6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.64■■■□□ 2.98
Atp6v0a4Q920R6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.63■■■□□ 2.97
Atp6v0a4Q920R6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Atp6v0a4Q920R6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.58■■■□□ 2.97
Atp6v0a4Q920R6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.37■■■□□ 2.93
Atp6v0a4Q920R6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
Atp6v0a4Q920R6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.33■■■□□ 2.93
Atp6v0a4Q920R6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Atp6v0a4Q920R6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Atp6v0a4Q920R6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
Atp6v0a4Q920R6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Atp6v0a4Q920R6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
Atp6v0a4Q920R6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.04■■■□□ 2.88
Atp6v0a4Q920R6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Atp6v0a4Q920R6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Atp6v0a4Q920R6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Atp6v0a4Q920R6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Atp6v0a4Q920R6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.95■■■□□ 2.87
Atp6v0a4Q920R6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.92■■■□□ 2.86
Atp6v0a4Q920R6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Atp6v0a4Q920R6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Atp6v0a4Q920R6 Gm25238-201ENSMUST00000174914 89 ntBASIC32.84■■■□□ 2.85
Atp6v0a4Q920R6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Atp6v0a4Q920R6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.54■■■□□ 2.8
Atp6v0a4Q920R6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Atp6v0a4Q920R6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
Atp6v0a4Q920R6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Atp6v0a4Q920R6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Atp6v0a4Q920R6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
Atp6v0a4Q920R6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.04■■■□□ 2.72
Atp6v0a4Q920R6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Atp6v0a4Q920R6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
Atp6v0a4Q920R6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.98■■■□□ 2.71
Atp6v0a4Q920R6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.92■■■□□ 2.7
Atp6v0a4Q920R6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
Atp6v0a4Q920R6 Gm27325-201ENSMUST00000175467 74 ntBASIC31.8■■■□□ 2.68
Atp6v0a4Q920R6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Atp6v0a4Q920R6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.69■■■□□ 2.66
Atp6v0a4Q920R6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Atp6v0a4Q920R6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Atp6v0a4Q920R6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.61■■■□□ 2.65
Atp6v0a4Q920R6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Atp6v0a4Q920R6 Gm25262-201ENSMUST00000174934 133 ntBASIC31.56■■■□□ 2.64
Atp6v0a4Q920R6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Atp6v0a4Q920R6 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.48■■■□□ 2.63
Atp6v0a4Q920R6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Atp6v0a4Q920R6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Atp6v0a4Q920R6 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Atp6v0a4Q920R6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Atp6v0a4Q920R6 Rab21-202ENSMUST00000218831 843 ntBASIC31.3■■■□□ 2.6
Atp6v0a4Q920R6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.28■■■□□ 2.6
Atp6v0a4Q920R6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Atp6v0a4Q920R6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Atp6v0a4Q920R6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.22■■■□□ 2.59
Atp6v0a4Q920R6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Atp6v0a4Q920R6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Atp6v0a4Q920R6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.12■■■□□ 2.57
Atp6v0a4Q920R6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Atp6v0a4Q920R6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Atp6v0a4Q920R6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31■■■□□ 2.55
Atp6v0a4Q920R6 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Atp6v0a4Q920R6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
Atp6v0a4Q920R6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.94■■■□□ 2.54
Atp6v0a4Q920R6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.92■■■□□ 2.54
Atp6v0a4Q920R6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Atp6v0a4Q920R6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Atp6v0a4Q920R6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
Atp6v0a4Q920R6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.84■■■□□ 2.53
Atp6v0a4Q920R6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Atp6v0a4Q920R6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Atp6v0a4Q920R6 Gm26115-201ENSMUST00000175605 87 ntBASIC30.81■■■□□ 2.52
Atp6v0a4Q920R6 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.79■■■□□ 2.52
Atp6v0a4Q920R6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Atp6v0a4Q920R6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.75■■■□□ 2.51
Atp6v0a4Q920R6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Atp6v0a4Q920R6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Atp6v0a4Q920R6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Atp6v0a4Q920R6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Atp6v0a4Q920R6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Atp6v0a4Q920R6 Gm8109-201ENSMUST00000194076 746 ntBASIC30.56■■■□□ 2.48
Atp6v0a4Q920R6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.53■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 131.1 ms