RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B RDR1Q08904 546 aa0.68□□□□□ -2.3
snR39BsnR39B RBD2Q12270 262 aa0.68□□□□□ -2.3
snR39BsnR39B YBL111CQ3E7Y5 667 aa0.68□□□□□ -2.3
snR39BsnR39B NUP145P49687 1317 aa0.67□□□□□ -2.3
snR39BsnR39B CAR1P00812 333 aaKnown RBP0.67□□□□□ -2.3
snR39BsnR39B ADH4P10127 382 aa0.67□□□□□ -2.3
snR39BsnR39B CLN3P13365 580 aa0.67□□□□□ -2.3
snR39BsnR39B COX11P19516 300 aaKnown RBP0.67□□□□□ -2.3
snR39BsnR39B LRE1P25579 583 aaKnown RBP0.67□□□□□ -2.3
snR39BsnR39B GCD7P32502 381 aaPredicted RBP0.67□□□□□ -2.3
snR39BsnR39B FRD1P32614 470 aaKnown RBP0.67□□□□□ -2.3
snR39BsnR39B TGL1P34163 548 aa0.67□□□□□ -2.3
snR39BsnR39B ECM15P35195 104 aa0.67□□□□□ -2.3
snR39BsnR39B NMD2P38798 1089 aaKnown RBP0.67□□□□□ -2.3
snR39BsnR39B SCS2P40075 244 aaKnown RBP0.67□□□□□ -2.3
snR39BsnR39B TMA108P40462 946 aa0.67□□□□□ -2.3
snR39BsnR39B SNG1P46950 547 aa0.67□□□□□ -2.3
snR39BsnR39B TSA2Q04120 196 aa0.67□□□□□ -2.3
snR39BsnR39B YMR087WQ04299 284 aa0.67□□□□□ -2.3
snR39BsnR39B SWA2Q06677 668 aa0.67□□□□□ -2.3
snR39BsnR39B SSK1Q07084 712 aa0.67□□□□□ -2.3
snR39BsnR39B TMS1Q12116 473 aa0.67□□□□□ -2.3
snR39BsnR39B ERV2Q12284 196 aa0.67□□□□□ -2.3
snR39BsnR39B WTM1Q12363 437 aaKnown RBP0.67□□□□□ -2.3
snR39BsnR39B PDH1Q12428 516 aaKnown RBP0.67□□□□□ -2.3
snR39BsnR39B MCM3P24279 971 aaKnown RBP0.66□□□□□ -2.3
snR39BsnR39B PCL1P24867 279 aa0.66□□□□□ -2.3
snR39BsnR39B RRP14P36080 434 aaKnown RBP0.66□□□□□ -2.3
snR39BsnR39B AAP1P37898 856 aaKnown RBP0.66□□□□□ -2.3
snR39BsnR39B CHK1P38147 527 aa0.66□□□□□ -2.3
snR39BsnR39B ALG8P40351 577 aa0.66□□□□□ -2.3
snR39BsnR39B REE1P40893 198 aa0.66□□□□□ -2.3
snR39BsnR39B ALG12P53730 551 aa0.66□□□□□ -2.3
snR39BsnR39B YPR091CQ06833 770 aa0.66□□□□□ -2.3
snR39BsnR39B PEX15Q08215 383 aa0.66□□□□□ -2.3
snR39BsnR39B THI20Q08224 551 aa0.66□□□□□ -2.3
snR39BsnR39B IES4Q08561 116 aa0.66□□□□□ -2.3
snR39BsnR39B CPR1P14832 162 aaKnown RBP0.65□□□□□ -2.31
snR39BsnR39B RNA14P25298 677 aaKnown RBP0.65□□□□□ -2.31
snR39BsnR39B PUT3P25502 979 aaPredicted RBP0.65□□□□□ -2.31
snR39BsnR39B SDH3P33421 198 aa0.65□□□□□ -2.31
snR39BsnR39B CSM2P40465 213 aa0.65□□□□□ -2.31
snR39BsnR39B CAB2P40506 365 aa0.65□□□□□ -2.31
snR39BsnR39B SMC3P47037 1230 aa0.65□□□□□ -2.31
snR39BsnR39B HST1P53685 503 aa0.65□□□□□ -2.31
snR39BsnR39B BSC5P53755 489 aa0.65□□□□□ -2.31
snR39BsnR39B WSC2P53832 503 aa0.65□□□□□ -2.31
snR39BsnR39B SUL2Q12325 893 aa0.65□□□□□ -2.31
snR39BsnR39B ADH2P00331 348 aaKnown RBP0.64□□□□□ -2.31
snR39BsnR39B HSP26P15992 214 aaKnown RBP RIP-Chip data0.64□□□□□ -2.31not detected
snR39BsnR39B PHO3P24031 467 aa0.64□□□□□ -2.31
snR39BsnR39B YCR022CP25620 114 aa0.64□□□□□ -2.31
snR39BsnR39B PAH1P32567 862 aa0.64□□□□□ -2.31
snR39BsnR39B UBP12P39538 1254 aa0.64□□□□□ -2.31
snR39BsnR39B SAW1P39735 261 aa0.64□□□□□ -2.31
snR39BsnR39B SHO1P40073 367 aa0.64□□□□□ -2.31
snR39BsnR39B YFL067WP43537 175 aa0.64□□□□□ -2.31
snR39BsnR39B IST1P53843 298 aaPredicted RBP0.64□□□□□ -2.31
snR39BsnR39B ADE13Q05911 482 aaKnown RBP0.64□□□□□ -2.31
snR39BsnR39B ATG26Q06321 1198 aa0.64□□□□□ -2.31
snR39BsnR39B SWT1Q12104 458 aa0.64□□□□□ -2.31
snR39BsnR39B PET122P10355 254 aa0.63□□□□□ -2.31
snR39BsnR39B SPO16P17122 198 aa0.63□□□□□ -2.31
snR39BsnR39B MRP4P32902 394 aa0.63□□□□□ -2.31
snR39BsnR39B SWD1P39706 426 aa0.63□□□□□ -2.31
snR39BsnR39B ECM10P39987 644 aa0.63□□□□□ -2.31
snR39BsnR39B NNF2P53253 936 aa0.63□□□□□ -2.31
snR39BsnR39B MDG1P53885 366 aa0.63□□□□□ -2.31
snR39BsnR39B RSN1Q03516 953 aa0.63□□□□□ -2.31
snR39BsnR39B ECM11Q04110 302 aa0.63□□□□□ -2.31
snR39BsnR39B GLO2Q05584 274 aa0.63□□□□□ -2.31
snR39BsnR39B MRPL35Q06678 367 aa0.63□□□□□ -2.31
snR39BsnR39B ESA1Q08649 445 aa0.63□□□□□ -2.31
snR39BsnR39B SLX4Q12098 748 aa0.63□□□□□ -2.31
snR39BsnR39B CCH1P50077 2039 aa0.62□□□□□ -2.31
snR39BsnR39B HEM15P16622 393 aa0.62□□□□□ -2.31
snR39BsnR39B PET123P17558 318 aa0.62□□□□□ -2.31
snR39BsnR39B CDC60P26637 1090 aaKnown RBP0.62□□□□□ -2.31
snR39BsnR39B NTR2P36118 322 aaPredicted RBP0.62□□□□□ -2.31
snR39BsnR39B UBA4P38820 440 aa0.62□□□□□ -2.31
snR39BsnR39B YIL161WP40449 235 aaKnown RBP0.62□□□□□ -2.31
snR39BsnR39B CHS6P40955 746 aa0.62□□□□□ -2.31
snR39BsnR39B SWP82P43554 623 aa0.62□□□□□ -2.31
snR39BsnR39B YGR237CP50089 785 aa0.62□□□□□ -2.31
snR39BsnR39B PEX25Q02969 394 aa0.62□□□□□ -2.31
snR39BsnR39B RSM28Q03430 361 aa0.62□□□□□ -2.31
snR39BsnR39B VHS1Q03785 461 aa0.62□□□□□ -2.31
snR39BsnR39B YMR160WQ03823 816 aa0.62□□□□□ -2.31
snR39BsnR39B DIC1Q06143 298 aa0.62□□□□□ -2.31
snR39BsnR39B YOL057WQ08225 711 aa0.62□□□□□ -2.31
snR39BsnR39B SDH5Q08230 162 aa0.62□□□□□ -2.31
snR39BsnR39B YPQ1Q12010 308 aa0.62□□□□□ -2.31
snR39BsnR39B APL4Q12028 832 aa0.62□□□□□ -2.31
snR39BsnR39B YDL009CQ12210 107 aa0.62□□□□□ -2.31
snR39BsnR39B PRM7Q12459 698 aa0.62□□□□□ -2.31
snR39BsnR39B AMD1P15274 810 aaKnown RBP0.61□□□□□ -2.31
snR39BsnR39B SGV1P23293 657 aaKnown RBP0.61□□□□□ -2.31
snR39BsnR39B SEF1P34228 1148 aa0.61□□□□□ -2.31
snR39BsnR39B ESL2P36168 1195 aa0.61□□□□□ -2.31
snR39BsnR39B KTR3P38130 404 aaPredicted RBP0.61□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms