RNA–Protein interactions for RNA: snR3

snR3, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR3, Length 194 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR3	snR3	NIP1	P32497	812 aa	Known RBP	4.99	□□□□□ -1.61
snR3	snR3	RIB7	P33312	244 aa		4.99	□□□□□ -1.61
snR3	snR3	YBR144C	P34215	104 aa		4.99	□□□□□ -1.61
snR3	snR3	ELF1	P36053	145 aa		4.99	□□□□□ -1.61
snR3	snR3	SLM4	P38247	162 aa		4.99	□□□□□ -1.61
snR3	snR3	NTC20	P38302	140 aa	Predicted RBP	4.99	□□□□□ -1.61
snR3	snR3	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
snR3	snR3	MRX1	P40050	688 aa		4.99	□□□□□ -1.61
snR3	snR3	LAS21	P40367	830 aa		4.99	□□□□□ -1.61
snR3	snR3	SWP82	P43554	623 aa		4.99	□□□□□ -1.61
snR3	snR3	URB2	P47108	1174 aa		4.99	□□□□□ -1.61
snR3	snR3	RPS7B	P48164	190 aa	Known RBP	4.99	□□□□□ -1.61
snR3	snR3	MSY1	P48527	492 aa		4.99	□□□□□ -1.61
snR3	snR3	IMD4	P50094	524 aa	Known RBP	4.99	□□□□□ -1.61
snR3	snR3	PAN2	P53010	1115 aa	Predicted RBP	4.99	□□□□□ -1.61
snR3	snR3	YNR068C	P53754	272 aa		4.99	□□□□□ -1.61
snR3	snR3	NSG2	P53898	299 aa		4.99	□□□□□ -1.61
snR3	snR3	EFM6	P53970	246 aa		4.99	□□□□□ -1.61
snR3	snR3	PPM1	Q04081	328 aa		4.99	□□□□□ -1.61
snR3	snR3	YDR109C	Q04585	715 aa		4.99	□□□□□ -1.61
snR3	snR3	YDL086W	Q07505	273 aa		4.99	□□□□□ -1.61
snR3	snR3	UAF30	Q08747	228 aa		4.99	□□□□□ -1.61
snR3	snR3	VPS54	Q12071	889 aa		4.99	□□□□□ -1.61
snR3	snR3	MDY2	Q12285	212 aa		4.99	□□□□□ -1.61
snR3	snR3	COX1	P00401	534 aa		4.98	□□□□□ -1.61
snR3	snR3	SIR3	P06701	978 aa		4.98	□□□□□ -1.61
snR3	snR3	HXT3	P32466	567 aa	Known RBP	4.98	□□□□□ -1.61
snR3	snR3	RML2	P32611	393 aa		4.98	□□□□□ -1.61
snR3	snR3	SUR1	P33300	382 aa		4.98	□□□□□ -1.61
snR3	snR3	SOF1	P33750	489 aa	Known RBP	4.98	□□□□□ -1.61
snR3	snR3	TIF3	P34167	436 aa	Known RBP	4.98	□□□□□ -1.61
snR3	snR3	PHO11	P35842	467 aa		4.98	□□□□□ -1.61
snR3	snR3	LHS1	P36016	881 aa		4.98	□□□□□ -1.61
snR3	snR3	YSW1	P38280	609 aa		4.98	□□□□□ -1.61
snR3	snR3	PHO12	P38693	467 aa		4.98	□□□□□ -1.61
snR3	snR3	ELO3	P40319	345 aa		4.98	□□□□□ -1.61
snR3	snR3	YIL089W	P40500	205 aa		4.98	□□□□□ -1.61
snR3	snR3	DPB11	P47027	764 aa	Predicted RBP	4.98	□□□□□ -1.61
snR3	snR3	SHE4	P51534	789 aa		4.98	□□□□□ -1.61
snR3	snR3	ALT2	P52892	507 aa		4.98	□□□□□ -1.61
snR3	snR3	PDR16	P53860	351 aa	Known RBP	4.98	□□□□□ -1.61
snR3	snR3	IPI3	P53877	555 aa		4.98	□□□□□ -1.61
snR3	snR3	ARP5	P53946	755 aa		4.98	□□□□□ -1.61
snR3	snR3	RRP45	Q05636	305 aa	Known RBP	4.98	□□□□□ -1.61
snR3	snR3	RBS1	Q05672	457 aa	Known RBP	4.98	□□□□□ -1.61
snR3	snR3	YLH47	Q06493	454 aa		4.98	□□□□□ -1.61
snR3	snR3	CRT10	Q08226	957 aa		4.98	□□□□□ -1.61
snR3	snR3	CEX1	Q12453	761 aa		4.98	□□□□□ -1.61
snR3	snR3	AI5_ALPHA	Q9ZZX1	630 aa		4.98	□□□□□ -1.61
snR3	snR3	AAC1	P04710	309 aa		4.97	□□□□□ -1.61
snR3	snR3	YPK1	P12688	680 aa	Known RBP	4.97	□□□□□ -1.61
snR3	snR3	OM45	P16547	393 aa		4.97	□□□□□ -1.61
snR3	snR3	YSP3	P25036	478 aa		4.97	□□□□□ -1.61
snR3	snR3	CNE1	P27825	502 aa		4.97	□□□□□ -1.61
snR3	snR3	IDH2	P28241	369 aa	Known RBP	4.97	□□□□□ -1.61
snR3	snR3	YME1	P32795	747 aa		4.97	□□□□□ -1.61
snR3	snR3	HIS7	P33734	552 aa	Known RBP	4.97	□□□□□ -1.61
snR3	snR3	RRP1	P35178	278 aa	Predicted RBP	4.97	□□□□□ -1.61
snR3	snR3	PIM1	P36775	1133 aa		4.97	□□□□□ -1.61
snR3	snR3	APL3	P38065	1025 aa		4.97	□□□□□ -1.61
snR3	snR3	ADH5	P38113	351 aa	Known RBP	4.97	□□□□□ -1.61
snR3	snR3	YHR131C	P38835	850 aa		4.97	□□□□□ -1.61
snR3	snR3	PHM8	P40025	321 aa		4.97	□□□□□ -1.61
snR3	snR3	OSW5	P40219	148 aa		4.97	□□□□□ -1.61
snR3	snR3	CHS6	P40955	746 aa		4.97	□□□□□ -1.61
snR3	snR3	STB2	P46679	850 aa		4.97	□□□□□ -1.61
snR3	snR3	SMC3	P47037	1230 aa		4.97	□□□□□ -1.61
snR3	snR3	NPA3	P47122	385 aa		4.97	□□□□□ -1.61
snR3	snR3	YGR149W	P48236	432 aa		4.97	□□□□□ -1.61
snR3	snR3	APT1	P49435	187 aa	Known RBP	4.97	□□□□□ -1.61
snR3	snR3	YGL138C	P53122	345 aa		4.97	□□□□□ -1.61
snR3	snR3	BUD17	P53727	317 aa		4.97	□□□□□ -1.61
snR3	snR3	RPS15	Q01855	142 aa	Known RBP	4.97	□□□□□ -1.61
snR3	snR3	SKO1	Q02100	647 aa		4.97	□□□□□ -1.61
snR3	snR3	UFO1	Q04511	668 aa		4.97	□□□□□ -1.61
snR3	snR3	YDL242W	Q07746	117 aa		4.97	□□□□□ -1.61
snR3	snR3	FRE3	Q08905	711 aa		4.97	□□□□□ -1.61
snR3	snR3	MED2	Q12124	431 aa		4.97	□□□□□ -1.61
snR3	snR3	TAF3	Q12297	353 aa		4.97	□□□□□ -1.61
snR3	snR3	YDR061W	Q12298	539 aa		4.97	□□□□□ -1.61
snR3	snR3	TFB5	Q3E7C1	72 aa	Predicted RBP	4.97	□□□□□ -1.61
snR3	snR3	YLR278C	Q05854	1341 aa		4.97	□□□□□ -1.61
snR3	snR3	SRV2	P17555	526 aa	Known RBP	4.96	□□□□□ -1.62
snR3	snR3	ART10	P18634	518 aa	Known RBP	4.96	□□□□□ -1.62
snR3	snR3	SRP54	P20424	541 aa	Known RBP	4.96	□□□□□ -1.62
snR3	snR3	SPE2	P21182	396 aa		4.96	□□□□□ -1.62
snR3	snR3	GRR1	P24814	1151 aa		4.96	□□□□□ -1.62
snR3	snR3	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
snR3	snR3	LAC1	P28496	418 aa		4.96	□□□□□ -1.62
snR3	snR3	GSH1	P32477	678 aa		4.96	□□□□□ -1.62
snR3	snR3	UGP1	P32861	499 aa	Known RBP	4.96	□□□□□ -1.62
snR3	snR3	SRB2	P34162	210 aa		4.96	□□□□□ -1.62
snR3	snR3	TUL1	P36096	758 aa		4.96	□□□□□ -1.62
snR3	snR3	MNN2	P38069	597 aa		4.96	□□□□□ -1.62
snR3	snR3	VPS45	P38932	577 aa		4.96	□□□□□ -1.62
snR3	snR3	FMP52	P40008	231 aa		4.96	□□□□□ -1.62
snR3	snR3	MKT1	P40850	830 aa	Known RBP	4.96	□□□□□ -1.62
snR3	snR3	STU2	P46675	888 aa		4.96	□□□□□ -1.62
snR3	snR3	COS5	P47187	383 aa		4.96	□□□□□ -1.62
snR3	snR3	FMS1	P50264	508 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms