RNA–Protein interactions for RNA: YPR005C

HAL1, Transcript of Cytoplasmic protein involved in halotolerance, yeast

Gene HAL1, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAL1	YPR005C	ZPS1	Q12512	249 aa		5.78	□□□□□ -1.48
HAL1	YPR005C	CYB2	P00175	591 aa		5.77	□□□□□ -1.49
HAL1	YPR005C	RPL3	P14126	387 aa	Known RBP	5.77	□□□□□ -1.49
HAL1	YPR005C	SRP54	P20424	541 aa	Known RBP	5.77	□□□□□ -1.49
HAL1	YPR005C	APN1	P22936	367 aa		5.77	□□□□□ -1.49
HAL1	YPR005C	RRP43	P25359	394 aa	Predicted RBP	5.77	□□□□□ -1.49
HAL1	YPR005C	AAD3	P25612	363 aa		5.77	□□□□□ -1.49
HAL1	YPR005C	SSE2	P32590	693 aa	Known RBP	5.77	□□□□□ -1.49
HAL1	YPR005C	MRE11	P32829	692 aa		5.77	□□□□□ -1.49
HAL1	YPR005C	POP2	P39008	433 aa		5.77	□□□□□ -1.49
HAL1	YPR005C	FAR3	P46671	204 aa		5.77	□□□□□ -1.49
HAL1	YPR005C	TCB2	P48231	1178 aa		5.77	□□□□□ -1.49
HAL1	YPR005C	IPI3	P53877	555 aa		5.77	□□□□□ -1.49
HAL1	YPR005C	DPB4	Q04603	196 aa	Known RBP	5.77	□□□□□ -1.49
HAL1	YPR005C	PCL8	Q08966	492 aa		5.77	□□□□□ -1.49
HAL1	YPR005C	Q0010	Q9ZZX9	128 aa		5.77	□□□□□ -1.49
HAL1	YPR005C	CPR2	P23285	205 aa		5.76	□□□□□ -1.49
HAL1	YPR005C	BUD14	P27637	709 aa		5.76	□□□□□ -1.49
HAL1	YPR005C	SEC66	P33754	206 aa		5.76	□□□□□ -1.49
HAL1	YPR005C	PMT1	P33775	817 aa		5.76	□□□□□ -1.49
HAL1	YPR005C	RPN11	P43588	306 aa	Known RBP	5.76	□□□□□ -1.49
HAL1	YPR005C	VPS73	P53142	486 aa	Known RBP	5.76	□□□□□ -1.49
HAL1	YPR005C	YGR127W	P53275	312 aa		5.76	□□□□□ -1.49
HAL1	YPR005C	EFM6	P53970	246 aa		5.76	□□□□□ -1.49
HAL1	YPR005C	KAP120	Q02932	1032 aa		5.76	□□□□□ -1.49
HAL1	YPR005C	RSF1	Q05043	376 aa		5.76	□□□□□ -1.49
HAL1	YPR005C	VTA1	Q06263	330 aa		5.76	□□□□□ -1.49
HAL1	YPR005C	CUE5	Q08412	411 aa	Known RBP	5.76	□□□□□ -1.49
HAL1	YPR005C	AHA1	Q12449	350 aa	Known RBP	5.76	□□□□□ -1.49
HAL1	YPR005C	SEC39	Q12745	709 aa		5.76	□□□□□ -1.49
HAL1	YPR005C	ISN1	Q99312	450 aa		5.76	□□□□□ -1.49
HAL1	YPR005C	ILV2	P07342	687 aa	Known RBP	5.75	□□□□□ -1.49
HAL1	YPR005C	DAL5	P15365	543 aa		5.75	□□□□□ -1.49
HAL1	YPR005C	PRD1	P25375	712 aa		5.75	□□□□□ -1.49
HAL1	YPR005C	BRF1	P29056	596 aa		5.75	□□□□□ -1.49
HAL1	YPR005C	MRPL9	P31334	269 aa		5.75	□□□□□ -1.49
HAL1	YPR005C	MGM1	P32266	881 aa		5.75	□□□□□ -1.49
HAL1	YPR005C	SWH1	P35845	1188 aa		5.75	□□□□□ -1.49
HAL1	YPR005C	YHL017W	P38745	532 aa		5.75	□□□□□ -1.49
HAL1	YPR005C	CAK1	P43568	368 aa	Predicted RBP	5.75	□□□□□ -1.49
HAL1	YPR005C	YFR020W	P43600	232 aa		5.75	□□□□□ -1.49
HAL1	YPR005C	CUL3	P53202	744 aa		5.75	□□□□□ -1.49
HAL1	YPR005C	WAR1	Q03631	944 aa		5.75	□□□□□ -1.49
HAL1	YPR005C	ATG9	Q12142	997 aa		5.75	□□□□□ -1.49
HAL1	YPR005C	GPM3	Q12326	303 aa		5.75	□□□□□ -1.49
HAL1	YPR005C	TPK2	P06245	380 aa		5.74	□□□□□ -1.49
HAL1	YPR005C	RRP7	P25368	297 aa	Predicted RBP	5.74	□□□□□ -1.49
HAL1	YPR005C	IMG1	P25626	169 aa		5.74	□□□□□ -1.49
HAL1	YPR005C	TIF3	P34167	436 aa	Known RBP	5.74	□□□□□ -1.49
HAL1	YPR005C	SNU114	P36048	1008 aa	Known RBP	5.74	□□□□□ -1.49
HAL1	YPR005C	GLG1	P36143	616 aa		5.74	□□□□□ -1.49
HAL1	YPR005C	MPP10	P47083	593 aa	Known RBP	5.74	□□□□□ -1.49
HAL1	YPR005C	EOS1	P53938	366 aa		5.74	□□□□□ -1.49
HAL1	YPR005C	KIN4	Q01919	800 aa		5.74	□□□□□ -1.49
HAL1	YPR005C	RAD33	Q04231	177 aa		5.74	□□□□□ -1.49
HAL1	YPR005C	YDR341C	Q05506	607 aa	Known RBP	5.74	□□□□□ -1.49
HAL1	YPR005C	SPE3	Q12074	293 aa	Known RBP	5.74	□□□□□ -1.49
HAL1	YPR005C	LEU9	Q12166	604 aa	Known RBP	5.74	□□□□□ -1.49
HAL1	YPR005C	MRP13	P12686	339 aa		5.73	□□□□□ -1.49
HAL1	YPR005C	VMA2	P16140	517 aa	Known RBP	5.73	□□□□□ -1.49
HAL1	YPR005C	SPE2	P21182	396 aa		5.73	□□□□□ -1.49
HAL1	YPR005C	GSH1	P32477	678 aa		5.73	□□□□□ -1.49
HAL1	YPR005C	YME1	P32795	747 aa		5.73	□□□□□ -1.49
HAL1	YPR005C	UGP1	P32861	499 aa	Known RBP	5.73	□□□□□ -1.49
HAL1	YPR005C	ADE17	P38009	592 aa	Known RBP	5.73	□□□□□ -1.49
HAL1	YPR005C	YHR054C	P38780	354 aa		5.73	□□□□□ -1.49
HAL1	YPR005C	MIT1	P40002	666 aa		5.73	□□□□□ -1.49
HAL1	YPR005C	APT1	P49435	187 aa	Known RBP	5.73	□□□□□ -1.49
HAL1	YPR005C	HRD3	Q05787	833 aa		5.73	□□□□□ -1.49
HAL1	YPR005C	NFI1	Q12216	726 aa		5.73	□□□□□ -1.49
HAL1	YPR005C	PUP3	P25451	205 aa	Known RBP	5.72	□□□□□ -1.49
HAL1	YPR005C	ERV1	P27882	189 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	YBR144C	P34215	104 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	HCS1	P34243	683 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	RRT2	P38332	387 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	PES4	P39684	611 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	EFM4	P40516	257 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	OPT1	P40897	799 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	HOS2	P53096	452 aa	Predicted RBP	5.72	□□□□□ -1.49
HAL1	YPR005C	CPR8	P53728	308 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	YPL107W	Q02873	248 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	PRP42	Q03776	544 aa	Known RBP	5.72	□□□□□ -1.49
HAL1	YPR005C	PDS5	Q04264	1277 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	SOV1	Q04748	898 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	TAF3	Q12297	353 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	FRE6	Q12473	712 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	CTF3	Q12748	733 aa		5.72	□□□□□ -1.49
HAL1	YPR005C	KGD1	P20967	1014 aa	Known RBP	5.71	□□□□□ -1.5
HAL1	YPR005C	TRX1	P22217	103 aa	Known RBP	5.71	□□□□□ -1.5
HAL1	YPR005C	MSP1	P28737	362 aa		5.71	□□□□□ -1.5
HAL1	YPR005C	HXT3	P32466	567 aa	Known RBP	5.71	□□□□□ -1.5
HAL1	YPR005C	LTV1	P34078	463 aa		5.71	□□□□□ -1.5
HAL1	YPR005C	YBL055C	P34220	418 aa	Predicted RBP	5.71	□□□□□ -1.5
HAL1	YPR005C	ELO1	P39540	310 aa		5.71	□□□□□ -1.5
HAL1	YPR005C	PTR3	P43606	678 aa		5.71	□□□□□ -1.5
HAL1	YPR005C	SAE2	P46946	345 aa		5.71	□□□□□ -1.5
HAL1	YPR005C	SUN4	P53616	420 aa		5.71	□□□□□ -1.5
HAL1	YPR005C	RPC11	Q04307	110 aa	Predicted RBP	5.71	□□□□□ -1.5
HAL1	YPR005C	DON1	Q05610	365 aa		5.71	□□□□□ -1.5
HAL1	YPR005C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 92.3 ms