RNA–Protein interactions for RNA: YPL275W

FDH2, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH2, Length 711 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH2	YPL275W	CIR2	Q08822	631 aa		4	□□□□□ -1.77
FDH2	YPL275W	CFT2	Q12102	859 aa	Predicted RBP	4	□□□□□ -1.77
FDH2	YPL275W	GLE1	Q12315	538 aa		4	□□□□□ -1.77
FDH2	YPL275W	SRP54	P20424	541 aa	Known RBP	3.99	□□□□□ -1.77
FDH2	YPL275W	YCP4	P25349	247 aa	Known RBP	3.99	□□□□□ -1.77
FDH2	YPL275W	OCT1	P35999	772 aa		3.99	□□□□□ -1.77
FDH2	YPL275W	IFA38	P38286	347 aa		3.99	□□□□□ -1.77
FDH2	YPL275W	SPL2	P38839	148 aa		3.99	□□□□□ -1.77
FDH2	YPL275W	SPC97	P38863	823 aa		3.99	□□□□□ -1.77
FDH2	YPL275W	JHD1	P40034	492 aa		3.99	□□□□□ -1.77
FDH2	YPL275W	CTF18	P49956	741 aa		3.99	□□□□□ -1.77
FDH2	YPL275W	VID30	P53076	958 aa		3.99	□□□□□ -1.77
FDH2	YPL275W	YNL050C	P53952	270 aa		3.99	□□□□□ -1.77
FDH2	YPL275W	RPL15B	P54780	204 aa	Predicted RBP	3.99	□□□□□ -1.77
FDH2	YPL275W	YPL068C	Q02749	293 aa		3.99	□□□□□ -1.77
FDH2	YPL275W	FCP1	Q03254	732 aa		3.99	□□□□□ -1.77
FDH2	YPL275W	YAP7	Q08182	245 aa		3.99	□□□□□ -1.77
FDH2	YPL275W	PCD1	Q12524	340 aa		3.99	□□□□□ -1.77
FDH2	YPL275W	YPR117W	Q06116	2489 aa		3.98	□□□□□ -1.77
FDH2	YPL275W	SPO16	P17122	198 aa		3.98	□□□□□ -1.77
FDH2	YPL275W	AIM17	P23180	465 aa	Known RBP	3.98	□□□□□ -1.77
FDH2	YPL275W	CNA1	P23287	553 aa		3.98	□□□□□ -1.77
FDH2	YPL275W	SWI3	P32591	825 aa		3.98	□□□□□ -1.77
FDH2	YPL275W	VPS24	P36095	224 aa	Known RBP	3.98	□□□□□ -1.77
FDH2	YPL275W	PSF2	P40359	213 aa		3.98	□□□□□ -1.77
FDH2	YPL275W	SAP185	P40856	1058 aa		3.98	□□□□□ -1.77
FDH2	YPL275W	MRPL13	Q02204	264 aa		3.98	□□□□□ -1.77
FDH2	YPL275W	PIG1	Q06216	648 aa		3.98	□□□□□ -1.77
FDH2	YPL275W	SWT1	Q12104	458 aa		3.98	□□□□□ -1.77
FDH2	YPL275W	YPR089W	O13585	888 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	ATP2	P00830	511 aa	Known RBP	3.97	□□□□□ -1.77
FDH2	YPL275W	TY2A-LR1	P0C2J4	438 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	TY2A-F	P0CX61	438 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	TY2A-GR2	P0CX62	438 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	TY2A-C	P25383	438 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	MGM1	P32266	881 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	IME2	P32581	645 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	XRS2	P33301	854 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	PTH2	P34222	208 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	BLI1	P35727	113 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	VPS41	P38959	992 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	YIL161W	P40449	235 aa	Known RBP	3.97	□□□□□ -1.77
FDH2	YPL275W	FAF1	P40546	346 aa	Predicted RBP	3.97	□□□□□ -1.77
FDH2	YPL275W	BNA1	P47096	177 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	PSP1	P50896	841 aa	Known RBP	3.97	□□□□□ -1.77
FDH2	YPL275W	YNL247W	P53852	767 aa	Known RBP	3.97	□□□□□ -1.77
FDH2	YPL275W	SEC5	P89102	971 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	TY2A-DR2	Q03483	438 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	GGA1	Q06336	557 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	CSR1	Q06705	408 aa	Known RBP	3.97	□□□□□ -1.77
FDH2	YPL275W	LSP1	Q12230	341 aa	Known RBP	3.97	□□□□□ -1.77
FDH2	YPL275W	TY2A-B	Q12260	438 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	COX17	Q12287	69 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	TY2A-OR2	Q12293	438 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	TY2A-DR1	Q12392	438 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	TY2A-OR1	Q12439	438 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	RRI1	Q12468	440 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	TY2A-DR3	Q99303	438 aa		3.97	□□□□□ -1.77
FDH2	YPL275W	GPA1	P08539	472 aa		3.96	□□□□□ -1.78
FDH2	YPL275W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
FDH2	YPL275W	KAR3	P17119	729 aa		3.96	□□□□□ -1.78
FDH2	YPL275W	RPT3	P33298	428 aa	Known RBP	3.96	□□□□□ -1.78
FDH2	YPL275W	NOC2	P39744	710 aa	Known RBP	3.96	□□□□□ -1.78
FDH2	YPL275W	SCW4	P53334	386 aa	Known RBP	3.96	□□□□□ -1.78
FDH2	YPL275W	MPS1	P54199	764 aa		3.96	□□□□□ -1.78
FDH2	YPL275W	MEH1	Q02205	184 aa		3.96	□□□□□ -1.78
FDH2	YPL275W	IRC4	Q03036	179 aa		3.96	□□□□□ -1.78
FDH2	YPL275W	PDR8	Q06149	701 aa		3.96	□□□□□ -1.78
FDH2	YPL275W	HER1	Q12276	1246 aa		3.96	□□□□□ -1.78
FDH2	YPL275W	FLO1	P32768	1537 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	NUC1	P08466	329 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	LCB1	P25045	558 aa	Known RBP	3.95	□□□□□ -1.78
FDH2	YPL275W	PWP2	P25635	923 aa	Known RBP	3.95	□□□□□ -1.78
FDH2	YPL275W	DEP1	P31385	405 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	MSS51	P32335	436 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	NUP120	P35729	1037 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	MRPL36	P36531	177 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	ERG7	P38604	731 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	PET100	P38958	111 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	IRC8	P47046	822 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	ASE1	P50275	885 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	COG1	P53079	417 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	RRP46	P53256	223 aa	Predicted RBP	3.95	□□□□□ -1.78
FDH2	YPL275W	GTR1	Q00582	310 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	ATG16	Q03818	150 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	SWA2	Q06677	668 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	PSR2	Q07949	397 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	MCH4	Q08268	501 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	VCX1	Q99385	411 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	SWI1	P09547	1314 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	SAC3	P46674	1301 aa		3.95	□□□□□ -1.78
FDH2	YPL275W	TPK1	P06244	397 aa		3.94	□□□□□ -1.78
FDH2	YPL275W	ZUO1	P32527	433 aa	Known RBP	3.94	□□□□□ -1.78
FDH2	YPL275W	NTR2	P36118	322 aa	Predicted RBP	3.94	□□□□□ -1.78
FDH2	YPL275W	ADE17	P38009	592 aa	Known RBP	3.94	□□□□□ -1.78
FDH2	YPL275W	FUI1	P38196	639 aa		3.94	□□□□□ -1.78
FDH2	YPL275W	FLO5	P38894	1075 aa		3.94	□□□□□ -1.78
FDH2	YPL275W	ASG1	P40467	964 aa		3.94	□□□□□ -1.78
FDH2	YPL275W	SMK1	P41808	388 aa		3.94	□□□□□ -1.78
FDH2	YPL275W	SWP82	P43554	623 aa		3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms