RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C SCL1P21243 252 aaKnown RBP7.91□□□□□ -1.14
LSP1YPL004C SFP1P32432 683 aa7.91□□□□□ -1.14
LSP1YPL004C SPR1P32603 445 aa7.91□□□□□ -1.14
LSP1YPL004C TIP20P33891 701 aa7.91□□□□□ -1.14
LSP1YPL004C YHR020WP38708 688 aaKnown RBP7.91□□□□□ -1.14
LSP1YPL004C YHR182WP38870 785 aa7.91□□□□□ -1.14
LSP1YPL004C MPT5P39016 859 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
LSP1YPL004C YEL073CP39974 107 aa7.91□□□□□ -1.14
LSP1YPL004C MEP1P40260 492 aa7.91□□□□□ -1.14
LSP1YPL004C YJL107CP42947 387 aa7.91□□□□□ -1.14
LSP1YPL004C GAT1P43574 510 aa7.91□□□□□ -1.14
LSP1YPL004C CTK3P46963 296 aaPredicted RBP7.91□□□□□ -1.14
LSP1YPL004C NNF1P47149 201 aa7.91□□□□□ -1.14
LSP1YPL004C BOL2P53082 120 aa7.91□□□□□ -1.14
LSP1YPL004C YNL058CP53947 316 aa7.91□□□□□ -1.14
LSP1YPL004C OPT2Q06593 877 aa7.91□□□□□ -1.14
LSP1YPL004C GRS2Q06817 618 aa7.91□□□□□ -1.14
LSP1YPL004C TFB4Q12004 338 aa7.91□□□□□ -1.14
LSP1YPL004C ICT1Q12385 394 aa7.91□□□□□ -1.14
LSP1YPL004C RGS2Q99188 309 aa7.91□□□□□ -1.14
LSP1YPL004C BRR2P32639 2163 aaKnown RBP7.9□□□□□ -1.14
LSP1YPL004C PHO5P00635 467 aa7.9□□□□□ -1.14
LSP1YPL004C PPH21P23594 369 aa7.9□□□□□ -1.14
LSP1YPL004C KIP2P28743 706 aa7.9□□□□□ -1.14
LSP1YPL004C YPT52P36018 234 aaKnown RBP7.9□□□□□ -1.14
LSP1YPL004C MUP3P38734 546 aa7.9□□□□□ -1.14
LSP1YPL004C PEP8P40335 379 aa7.9□□□□□ -1.14
LSP1YPL004C HOS4P40480 1083 aa7.9□□□□□ -1.14
LSP1YPL004C RCO1Q04779 684 aa7.9□□□□□ -1.14
LSP1YPL004C THI73Q07904 523 aa7.9□□□□□ -1.14
LSP1YPL004C RTK1Q12100 620 aaPredicted RBP7.9□□□□□ -1.14
LSP1YPL004C RPF2P36160 344 aaKnown RBP7.89□□□□□ -1.15
LSP1YPL004C MRPL37P36532 105 aa7.89□□□□□ -1.15
LSP1YPL004C ELO1P39540 310 aa7.89□□□□□ -1.15
LSP1YPL004C ERV46P39727 415 aa7.89□□□□□ -1.15
LSP1YPL004C NUP85P46673 744 aa7.89□□□□□ -1.15
LSP1YPL004C GCD14P46959 383 aaPredicted RBP7.89□□□□□ -1.15
LSP1YPL004C BIO4P53630 237 aa7.89□□□□□ -1.15
LSP1YPL004C TAF11Q04226 346 aa7.89□□□□□ -1.15
LSP1YPL004C SPO20Q04359 397 aa7.89□□□□□ -1.15
LSP1YPL004C YML096WQ04489 525 aa7.89□□□□□ -1.15
LSP1YPL004C SSL1Q04673 461 aaPredicted RBP7.89□□□□□ -1.15
LSP1YPL004C RSC3Q06639 885 aa7.89□□□□□ -1.15
LSP1YPL004C UPC2Q12151 913 aa7.89□□□□□ -1.15
LSP1YPL004C SEC53P07283 254 aaKnown RBP7.88□□□□□ -1.15
LSP1YPL004C FUM1P08417 488 aaKnown RBP7.88□□□□□ -1.15
LSP1YPL004C YAR066WP0CX18 203 aa7.88□□□□□ -1.15
LSP1YPL004C YHR214WP0CX19 203 aa7.88□□□□□ -1.15
LSP1YPL004C TRM1P15565 570 aaKnown RBP7.88□□□□□ -1.15
LSP1YPL004C SNF5P18480 905 aa7.88□□□□□ -1.15
LSP1YPL004C RSC6P25632 483 aa7.88□□□□□ -1.15
LSP1YPL004C OAF3P36023 863 aa7.88□□□□□ -1.15
LSP1YPL004C RRP14P36080 434 aaKnown RBP7.88□□□□□ -1.15
LSP1YPL004C YPT35P38815 214 aaKnown RBP7.88□□□□□ -1.15
LSP1YPL004C YAL037WP39728 267 aa7.88□□□□□ -1.15
LSP1YPL004C LSM5P40089 93 aaKnown RBP7.88□□□□□ -1.15
LSP1YPL004C TFG1P41895 735 aaPredicted RBP7.88□□□□□ -1.15
LSP1YPL004C CIS3P47001 227 aa7.88□□□□□ -1.15
LSP1YPL004C YMR209CQ03648 457 aa7.88□□□□□ -1.15
LSP1YPL004C TRM12Q04235 462 aa7.88□□□□□ -1.15
LSP1YPL004C EAF1Q06337 982 aa7.88□□□□□ -1.15
LSP1YPL004C ALR1Q08269 859 aa7.88□□□□□ -1.15
LSP1YPL004C VHS3Q08438 674 aa7.88□□□□□ -1.15
LSP1YPL004C YLR053CQ12026 108 aa7.88□□□□□ -1.15
LSP1YPL004C UBX3Q12229 455 aa7.88□□□□□ -1.15
LSP1YPL004C AAD3P25612 363 aa7.87□□□□□ -1.15
LSP1YPL004C PIM1P36775 1133 aa7.87□□□□□ -1.15
LSP1YPL004C DED81P38707 554 aaKnown RBP7.87□□□□□ -1.15
LSP1YPL004C EFM1P38732 585 aa7.87□□□□□ -1.15
LSP1YPL004C FAA3P39002 694 aa7.87□□□□□ -1.15
LSP1YPL004C GIM4P40005 111 aaKnown RBP7.87□□□□□ -1.15
LSP1YPL004C LTP1P40347 161 aa7.87□□□□□ -1.15
LSP1YPL004C SSU1P41930 458 aa7.87□□□□□ -1.15
LSP1YPL004C FET5P43561 622 aa7.87□□□□□ -1.15
LSP1YPL004C CLD1P53264 445 aa7.87□□□□□ -1.15
LSP1YPL004C NHP10Q03435 203 aa7.87□□□□□ -1.15
LSP1YPL004C CSN9Q03981 162 aa7.87□□□□□ -1.15
LSP1YPL004C HPT1Q04178 221 aaKnown RBP7.87□□□□□ -1.15
LSP1YPL004C UTP13Q05946 817 aaKnown RBP7.87□□□□□ -1.15
LSP1YPL004C MCD1Q12158 566 aa7.87□□□□□ -1.15
LSP1YPL004C MDY2Q12285 212 aa7.87□□□□□ -1.15
LSP1YPL004C YKL068W-AQ3E826 78 aa7.87□□□□□ -1.15
LSP1YPL004C RPL1AP0CX43 217 aaKnown RBP7.86□□□□□ -1.15
LSP1YPL004C RPL1BP0CX44 217 aaKnown RBP7.86□□□□□ -1.15
LSP1YPL004C MET8P15807 274 aa7.86□□□□□ -1.15
LSP1YPL004C PHA2P32452 334 aa7.86□□□□□ -1.15
LSP1YPL004C PTM1P32857 523 aa7.86□□□□□ -1.15
LSP1YPL004C YHR045WP38775 560 aa7.86□□□□□ -1.15
LSP1YPL004C UBA4P38820 440 aa7.86□□□□□ -1.15
LSP1YPL004C DMA1P38823 416 aa7.86□□□□□ -1.15
LSP1YPL004C YJL206CP39529 758 aa7.86□□□□□ -1.15
LSP1YPL004C ZIM17P42844 174 aa7.86□□□□□ -1.15
LSP1YPL004C LIA1P47120 325 aaKnown RBP7.86□□□□□ -1.15
LSP1YPL004C MPS2P53159 387 aa7.86□□□□□ -1.15
LSP1YPL004C RCF2P53721 224 aa7.86□□□□□ -1.15
LSP1YPL004C ECM9Q02202 377 aa7.86□□□□□ -1.15
LSP1YPL004C RNT1Q02555 471 aa7.86□□□□□ -1.15
LSP1YPL004C YDR444WQ04093 687 aa7.86□□□□□ -1.15
LSP1YPL004C SFH1Q06168 426 aa7.86□□□□□ -1.15
LSP1YPL004C CRN1Q06440 651 aa7.86□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms