RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C CMK1P27466 446 aaKnown RBP5.29□□□□□ -1.56
RAT1YOR048C GRS1P38088 690 aaKnown RBP5.29□□□□□ -1.56
RAT1YOR048C IST2P38250 946 aa5.29□□□□□ -1.56
RAT1YOR048C ARN1P38731 627 aa5.29□□□□□ -1.56
RAT1YOR048C EGD2P38879 174 aaKnown RBP5.29□□□□□ -1.56
RAT1YOR048C MIT1P40002 666 aa5.29□□□□□ -1.56
RAT1YOR048C COA1P40452 197 aa5.29□□□□□ -1.56
RAT1YOR048C MET18P40469 1032 aa5.29□□□□□ -1.56
RAT1YOR048C MSS2P40990 351 aa5.29□□□□□ -1.56
RAT1YOR048C CSN12P47130 423 aa5.29□□□□□ -1.56
RAT1YOR048C PRP38Q00723 242 aaPredicted RBP5.29□□□□□ -1.56
RAT1YOR048C ECM9Q02202 377 aa5.29□□□□□ -1.56
RAT1YOR048C TRM12Q04235 462 aa5.29□□□□□ -1.56
RAT1YOR048C APC4Q04601 652 aa5.29□□□□□ -1.56
RAT1YOR048C EMG1Q06287 252 aaKnown RBP5.29□□□□□ -1.56
RAT1YOR048C SGO1Q08490 590 aa5.29□□□□□ -1.56
RAT1YOR048C RAD59Q12223 238 aa5.29□□□□□ -1.56
RAT1YOR048C SNF8Q12483 233 aa5.29□□□□□ -1.56
RAT1YOR048C NHA1Q99271 985 aa5.29□□□□□ -1.56
RAT1YOR048C POX1P13711 748 aa5.28□□□□□ -1.56
RAT1YOR048C NMT1P14743 455 aa5.28□□□□□ -1.56
RAT1YOR048C VPS33P20795 691 aa5.28□□□□□ -1.56
RAT1YOR048C YCR090CP25654 182 aaKnown RBP5.28□□□□□ -1.56
RAT1YOR048C CIN8P27895 1000 aa5.28□□□□□ -1.56
RAT1YOR048C SKG1P36169 355 aa5.28□□□□□ -1.56
RAT1YOR048C CYC2P38909 366 aa5.28□□□□□ -1.56
RAT1YOR048C CCT7P42943 550 aaKnown RBP5.28□□□□□ -1.56
RAT1YOR048C STB2P46679 850 aa5.28□□□□□ -1.56
RAT1YOR048C SNF12P53628 566 aa5.28□□□□□ -1.56
RAT1YOR048C GPI11Q06636 219 aa5.28□□□□□ -1.56
RAT1YOR048C DNL4Q08387 944 aaPredicted RBP5.28□□□□□ -1.56
RAT1YOR048C TPK1P06244 397 aa5.28□□□□□ -1.56
RAT1YOR048C SSA4P22202 642 aaKnown RBP5.28□□□□□ -1.56
RAT1YOR048C DBP1P24784 617 aaKnown RBP5.28□□□□□ -1.56
RAT1YOR048C RSA4P25382 515 aaKnown RBP5.28□□□□□ -1.56
RAT1YOR048C PEX3P28795 441 aa5.28□□□□□ -1.56
RAT1YOR048C SYN8P31377 255 aa5.28□□□□□ -1.56
RAT1YOR048C RPC82P32349 654 aa5.28□□□□□ -1.56
RAT1YOR048C YHR054CP38780 354 aa5.28□□□□□ -1.56
RAT1YOR048C RSC30P38781 883 aa5.28□□□□□ -1.56
RAT1YOR048C YHR078WP38799 552 aa5.28□□□□□ -1.56
RAT1YOR048C DOT6P40059 670 aaKnown RBP5.28□□□□□ -1.56
RAT1YOR048C PEX12Q04370 399 aa5.28□□□□□ -1.56
RAT1YOR048C MSS18P08593 268 aa5.27□□□□□ -1.57
RAT1YOR048C COS2P0CX12 379 aa5.27□□□□□ -1.57
RAT1YOR048C COS3P0CX13 379 aa5.27□□□□□ -1.57
RAT1YOR048C YPK1P12688 680 aaKnown RBP5.27□□□□□ -1.57
RAT1YOR048C GSH1P32477 678 aa5.27□□□□□ -1.57
RAT1YOR048C UBX7P38349 436 aa5.27□□□□□ -1.57
RAT1YOR048C MND2P40577 368 aa5.27□□□□□ -1.57
RAT1YOR048C RLP7P40693 322 aaKnown RBP5.27□□□□□ -1.57
RAT1YOR048C COS4P43542 379 aa5.27□□□□□ -1.57
RAT1YOR048C SPC98P53540 846 aa5.27□□□□□ -1.57
RAT1YOR048C BRE4Q07660 1125 aa5.27□□□□□ -1.57
RAT1YOR048C NUS1Q12063 375 aa5.27□□□□□ -1.57
RAT1YOR048C MNL2Q12205 849 aa5.27□□□□□ -1.57
RAT1YOR048C RMD5Q12508 421 aa5.27□□□□□ -1.57
RAT1YOR048C HIS1P00498 297 aaKnown RBP5.27□□□□□ -1.57
RAT1YOR048C PKC1P24583 1151 aa5.27□□□□□ -1.57
RAT1YOR048C ARP2P32381 391 aaKnown RBP5.27□□□□□ -1.57
RAT1YOR048C BCK2P33306 851 aa5.27□□□□□ -1.57
RAT1YOR048C NTR2P36118 322 aaPredicted RBP5.27□□□□□ -1.57
RAT1YOR048C VRP1P37370 817 aa5.27□□□□□ -1.57
RAT1YOR048C ROT2P38138 954 aa5.27□□□□□ -1.57
RAT1YOR048C EDC3P39998 551 aaKnown RBP5.27□□□□□ -1.57
RAT1YOR048C MEP2P41948 499 aa5.27□□□□□ -1.57
RAT1YOR048C MNN11P46985 422 aaKnown RBP5.27□□□□□ -1.57
RAT1YOR048C TY4A-JP47023 414 aa5.27□□□□□ -1.57
RAT1YOR048C IML2P47031 731 aa5.27□□□□□ -1.57
RAT1YOR048C CWC15Q03772 175 aaKnown RBP5.27□□□□□ -1.57
RAT1YOR048C PUS5Q06244 254 aa5.27□□□□□ -1.57
RAT1YOR048C MF(ALPHA)1P01149 165 aa5.26□□□□□ -1.57
RAT1YOR048C RPL17AP05740 184 aaKnown RBP5.26□□□□□ -1.57
RAT1YOR048C GRX2P17695 143 aaKnown RBP5.26□□□□□ -1.57
RAT1YOR048C TRX2P22803 104 aaKnown RBP5.26□□□□□ -1.57
RAT1YOR048C RPL24BP24000 155 aaKnown RBP5.26□□□□□ -1.57
RAT1YOR048C MRPL9P31334 269 aa5.26□□□□□ -1.57
RAT1YOR048C SRP101P32916 621 aa5.26□□□□□ -1.57
RAT1YOR048C MRP21P38175 177 aa5.26□□□□□ -1.57
RAT1YOR048C YHR202WP38887 602 aa5.26□□□□□ -1.57
RAT1YOR048C YHR219WP38900 624 aa5.26□□□□□ -1.57
RAT1YOR048C GDH3P39708 457 aa5.26□□□□□ -1.57
RAT1YOR048C COG3P40094 801 aa5.26□□□□□ -1.57
RAT1YOR048C NUP85P46673 744 aa5.26□□□□□ -1.57
RAT1YOR048C RPL17BP46990 184 aaKnown RBP5.26□□□□□ -1.57
RAT1YOR048C MSE1P48525 536 aa5.26□□□□□ -1.57
RAT1YOR048C YGR054WP53235 642 aaKnown RBP5.26□□□□□ -1.57
RAT1YOR048C FPK1P53739 893 aa5.26□□□□□ -1.57
RAT1YOR048C BNI4P53858 892 aa5.26□□□□□ -1.57
RAT1YOR048C YNL181WP53878 407 aa5.26□□□□□ -1.57
RAT1YOR048C SIW14P53965 281 aa5.26□□□□□ -1.57
RAT1YOR048C MET31Q03081 177 aa5.26□□□□□ -1.57
RAT1YOR048C MAK3Q03503 176 aa5.26□□□□□ -1.57
RAT1YOR048C GSH2Q08220 491 aa5.26□□□□□ -1.57
RAT1YOR048C YBL113CQ7M4S9 792 aa5.26□□□□□ -1.57
RAT1YOR048C THP2O13539 261 aaKnown RBP5.26□□□□□ -1.57
RAT1YOR048C AMD2P22580 549 aa5.26□□□□□ -1.57
RAT1YOR048C RHB1P25378 209 aa5.26□□□□□ -1.57
RAT1YOR048C GDH2P33327 1092 aaKnown RBP5.26□□□□□ -1.57
RAT1YOR048C SKT5P34226 696 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms