RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C KAR4P25583 335 aa2.49□□□□□ -2.01
SGS1YMR190C HXT4P32467 576 aa2.49□□□□□ -2.01
SGS1YMR190C CDC13P32797 924 aaKnown RBP2.49□□□□□ -2.01
SGS1YMR190C OAR1P35731 278 aa2.49□□□□□ -2.01
SGS1YMR190C LHS1P36016 881 aa2.49□□□□□ -2.01
SGS1YMR190C UTH1P36135 365 aa2.49□□□□□ -2.01
SGS1YMR190C TFA2P36145 328 aa2.49□□□□□ -2.01
SGS1YMR190C MOH1P38191 138 aa2.49□□□□□ -2.01
SGS1YMR190C DED81P38707 554 aaKnown RBP2.49□□□□□ -2.01
SGS1YMR190C MBP1P39678 833 aa2.49□□□□□ -2.01
SGS1YMR190C ERP2P39704 215 aa2.49□□□□□ -2.01
SGS1YMR190C ABM1P47146 123 aa2.49□□□□□ -2.01
SGS1YMR190C VPS9P54787 451 aa2.49□□□□□ -2.01
SGS1YMR190C ARO80Q04052 950 aa2.49□□□□□ -2.01
SGS1YMR190C NTG2Q08214 380 aa2.49□□□□□ -2.01
SGS1YMR190C CBC2Q08920 208 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SGS1YMR190C FAP7Q12055 197 aaPredicted RBP2.49□□□□□ -2.01
SGS1YMR190C KCS1Q12494 1050 aa2.49□□□□□ -2.01
SGS1YMR190C YKL033W-AQ86ZR7 236 aa2.49□□□□□ -2.01
SGS1YMR190C ADE4P04046 510 aaKnown RBP2.49□□□□□ -2.01
SGS1YMR190C RPL4AP10664 362 aaKnown RBP2.49□□□□□ -2.01
SGS1YMR190C STE12P13574 688 aa2.49□□□□□ -2.01
SGS1YMR190C CBF1P17106 351 aa2.49□□□□□ -2.01
SGS1YMR190C SAT4P25333 603 aaKnown RBP2.49□□□□□ -2.01
SGS1YMR190C SIN4P32259 974 aa2.49□□□□□ -2.01
SGS1YMR190C HEM12P32347 362 aaPredicted RBP2.49□□□□□ -2.01
SGS1YMR190C YME1P32795 747 aa2.49□□□□□ -2.01
SGS1YMR190C ARA1P38115 344 aa2.49□□□□□ -2.01
SGS1YMR190C MSG5P38590 489 aa2.49□□□□□ -2.01
SGS1YMR190C LYS9P38999 446 aa2.49□□□□□ -2.01
SGS1YMR190C YIR007WP40566 764 aa2.49□□□□□ -2.01
SGS1YMR190C SAD1P43589 448 aa2.49□□□□□ -2.01
SGS1YMR190C RPL4BP49626 362 aaKnown RBP2.49□□□□□ -2.01
SGS1YMR190C ADI1Q03677 179 aa2.49□□□□□ -2.01
SGS1YMR190C PLB3Q08108 686 aa2.49□□□□□ -2.01
SGS1YMR190C PFK27Q12471 397 aaPredicted RBP2.49□□□□□ -2.01
SGS1YMR190C COX2P00410 251 aa2.49□□□□□ -2.01
SGS1YMR190C GCR1P07261 785 aa2.49□□□□□ -2.01
SGS1YMR190C URA4P20051 364 aa2.49□□□□□ -2.01
SGS1YMR190C UBA1P22515 1024 aaKnown RBP2.49□□□□□ -2.01
SGS1YMR190C CDC10P25342 322 aaKnown RBP2.49□□□□□ -2.01
SGS1YMR190C IMG1P25626 169 aa2.49□□□□□ -2.01
SGS1YMR190C DBF4P32325 704 aa2.49□□□□□ -2.01
SGS1YMR190C SPF1P39986 1215 aaKnown RBP2.49□□□□□ -2.01
SGS1YMR190C CUP9P41817 306 aa2.49□□□□□ -2.01
SGS1YMR190C UBX4P54730 416 aa2.49□□□□□ -2.01
SGS1YMR190C ELP3Q02908 557 aaKnown RBP2.49□□□□□ -2.01
SGS1YMR190C VPS16Q03308 798 aa2.49□□□□□ -2.01
SGS1YMR190C SNU56Q03782 492 aaKnown RBP2.49□□□□□ -2.01
SGS1YMR190C SAM3Q08986 587 aa2.49□□□□□ -2.01
SGS1YMR190C GLO4Q12320 285 aa2.49□□□□□ -2.01
SGS1YMR190C CHS1P08004 1131 aa2.48□□□□□ -2.01
SGS1YMR190C INO1P11986 533 aa2.48□□□□□ -2.01
SGS1YMR190C PDC5P16467 563 aaKnown RBP2.48□□□□□ -2.01
SGS1YMR190C YCR015CP25616 317 aa2.48□□□□□ -2.01
SGS1YMR190C KIP2P28743 706 aa2.48□□□□□ -2.01
SGS1YMR190C BEM3P32873 1128 aa2.48□□□□□ -2.01
SGS1YMR190C STE5P32917 917 aa2.48□□□□□ -2.01
SGS1YMR190C GLY1P37303 387 aaKnown RBP2.48□□□□□ -2.01
SGS1YMR190C YBR259WP38338 688 aa2.48□□□□□ -2.01
SGS1YMR190C YER034WP40022 185 aaKnown RBP2.48□□□□□ -2.01
SGS1YMR190C ABP140Q08641 628 aaKnown RBP2.48□□□□□ -2.01
SGS1YMR190C NCA2Q12374 616 aa2.48□□□□□ -2.01
SGS1YMR190C YIL046W-AQ3E7Z4 54 aa2.48□□□□□ -2.01
SGS1YMR190C YOR019WQ99248 730 aa2.48□□□□□ -2.01
SGS1YMR190C IMA3P0CW40 589 aa2.48□□□□□ -2.01
SGS1YMR190C IMA4P0CW41 589 aa2.48□□□□□ -2.01
SGS1YMR190C CBS2P14905 389 aa2.48□□□□□ -2.01
SGS1YMR190C NCP1P16603 691 aaKnown RBP2.48□□□□□ -2.01
SGS1YMR190C PMA2P19657 947 aa2.48□□□□□ -2.01
SGS1YMR190C SIS1P25294 352 aaKnown RBP2.48□□□□□ -2.01
SGS1YMR190C SWC5P38326 303 aa2.48□□□□□ -2.01
SGS1YMR190C IKS1P47042 667 aa2.48□□□□□ -2.01
SGS1YMR190C AQR1P53943 586 aa2.48□□□□□ -2.01
SGS1YMR190C ADE12P80210 433 aaKnown RBP2.48□□□□□ -2.01
SGS1YMR190C FRA1Q07825 749 aa2.48□□□□□ -2.01
SGS1YMR190C IMA2Q08295 589 aa2.48□□□□□ -2.01
SGS1YMR190C PGC1Q08959 321 aa2.48□□□□□ -2.01
SGS1YMR190C RCN2Q12044 265 aa2.48□□□□□ -2.01
SGS1YMR190C VPS54Q12071 889 aa2.48□□□□□ -2.01
SGS1YMR190C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SGS1YMR190C SLP1Q12232 587 aa2.48□□□□□ -2.01
SGS1YMR190C RAD1P06777 1100 aa2.48□□□□□ -2.01
SGS1YMR190C NDI1P32340 513 aa2.48□□□□□ -2.01
SGS1YMR190C CUE2P36075 443 aaKnown RBP2.48□□□□□ -2.01
SGS1YMR190C TRM7P38238 310 aaKnown RBP2.48□□□□□ -2.01
SGS1YMR190C VHC1P38329 1120 aa2.48□□□□□ -2.01
SGS1YMR190C SEO1P39709 593 aa2.48□□□□□ -2.01
SGS1YMR190C GIM4P40005 111 aaKnown RBP2.48□□□□□ -2.01
SGS1YMR190C YMR134WP40207 237 aa2.48□□□□□ -2.01
SGS1YMR190C YIL108WP40483 696 aaKnown RBP2.48□□□□□ -2.01
SGS1YMR190C XBP1P40489 647 aa2.48□□□□□ -2.01
SGS1YMR190C TIM54P47045 478 aa2.48□□□□□ -2.01
SGS1YMR190C YIP4P53093 235 aa2.48□□□□□ -2.01
SGS1YMR190C YMR102CQ03177 834 aa2.48□□□□□ -2.01
SGS1YMR190C VHS1Q03785 461 aa2.48□□□□□ -2.01
SGS1YMR190C RCO1Q04779 684 aa2.48□□□□□ -2.01
SGS1YMR190C PNP1Q05788 311 aa2.48□□□□□ -2.01
SGS1YMR190C THI7Q05998 598 aa2.48□□□□□ -2.01
SGS1YMR190C TAZ1Q06510 381 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms