RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A UTP9P38882 575 aaKnown RBP12.59□□□□□ -0.39
LSM3YLR438C-A SSN3P39073 555 aa12.59□□□□□ -0.39
LSM3YLR438C-A COQ5P49017 307 aa12.59□□□□□ -0.39
LSM3YLR438C-A NBP35P52920 328 aa12.59□□□□□ -0.39
LSM3YLR438C-A MRS2Q01926 470 aa12.59□□□□□ -0.39
LSM3YLR438C-A RNY1Q02933 434 aaKnown RBP12.59□□□□□ -0.39
LSM3YLR438C-A RSC3Q06639 885 aa12.59□□□□□ -0.39
LSM3YLR438C-A SAM4Q08985 325 aaKnown RBP12.59□□□□□ -0.39
LSM3YLR438C-A YMR085WP0CF18 432 aa12.58□□□□□ -0.4
LSM3YLR438C-A NMT1P14743 455 aa12.58□□□□□ -0.4
LSM3YLR438C-A HSC82P15108 705 aaKnown RBP12.58□□□□□ -0.4
LSM3YLR438C-A PHO84P25297 587 aaKnown RBP12.58□□□□□ -0.4
LSM3YLR438C-A TIM17P39515 158 aa12.58□□□□□ -0.4
LSM3YLR438C-A MEP1P40260 492 aa12.58□□□□□ -0.4
LSM3YLR438C-A MAD3P47074 515 aa12.58□□□□□ -0.4
LSM3YLR438C-A YNL035CP53962 389 aaKnown RBP12.58□□□□□ -0.4
LSM3YLR438C-A YML119WQ03208 357 aa12.58□□□□□ -0.4
LSM3YLR438C-A SNT1P25357 1226 aa12.57□□□□□ -0.4
LSM3YLR438C-A RFA2P26754 273 aaKnown RBP12.57□□□□□ -0.4
LSM3YLR438C-A THI80P35202 319 aa12.57□□□□□ -0.4
LSM3YLR438C-A PRM2P40534 656 aa12.57□□□□□ -0.4
LSM3YLR438C-A EFM5P53200 248 aaKnown RBP12.57□□□□□ -0.4
LSM3YLR438C-A RMI1Q02685 241 aa12.57□□□□□ -0.4
LSM3YLR438C-A GOT1Q03554 138 aa12.57□□□□□ -0.4
LSM3YLR438C-A MCD1Q12158 566 aa12.57□□□□□ -0.4
LSM3YLR438C-A YPR089WO13585 888 aa12.56□□□□□ -0.4
LSM3YLR438C-A RSR1P13856 272 aa12.56□□□□□ -0.4
LSM3YLR438C-A SEC15P22224 910 aa12.56□□□□□ -0.4
LSM3YLR438C-A YSC84P32793 468 aa12.56□□□□□ -0.4
LSM3YLR438C-A SKT5P34226 696 aa12.56□□□□□ -0.4
LSM3YLR438C-A YKL100CP34248 587 aa12.56□□□□□ -0.4
LSM3YLR438C-A HSM3P38348 480 aa12.56□□□□□ -0.4
LSM3YLR438C-A RRP3P38712 501 aaKnown RBP12.56□□□□□ -0.4
LSM3YLR438C-A SHU2P38957 223 aa12.56□□□□□ -0.4
LSM3YLR438C-A YDR089WP38966 869 aa12.56□□□□□ -0.4
LSM3YLR438C-A MPT5P39016 859 aaKnown RBP RIP-Chip data12.56□□□□□ -0.4not detected
LSM3YLR438C-A GIP4P39732 760 aa12.56□□□□□ -0.4
LSM3YLR438C-A LSM5P40089 93 aaKnown RBP12.56□□□□□ -0.4
LSM3YLR438C-A YJL070CP40361 888 aa12.56□□□□□ -0.4
LSM3YLR438C-A YRB1P41920 201 aaKnown RBP12.56□□□□□ -0.4
LSM3YLR438C-A AIF1P52923 378 aa12.56□□□□□ -0.4
LSM3YLR438C-A TVP15Q03860 143 aa12.56□□□□□ -0.4
LSM3YLR438C-A YML053CQ04978 212 aa12.56□□□□□ -0.4
LSM3YLR438C-A TMA46Q12000 345 aaKnown RBP12.56□□□□□ -0.4
LSM3YLR438C-A TRM8Q12009 286 aa12.56□□□□□ -0.4
LSM3YLR438C-A FAB1P34756 2278 aa12.56□□□□□ -0.4
LSM3YLR438C-A RHO2P06781 192 aa12.55□□□□□ -0.4
LSM3YLR438C-A RML2P32611 393 aa12.55□□□□□ -0.4
LSM3YLR438C-A TFC3P34111 1160 aa12.55□□□□□ -0.4
LSM3YLR438C-A YPT52P36018 234 aaKnown RBP12.55□□□□□ -0.4
LSM3YLR438C-A RPF2P36160 344 aaKnown RBP12.55□□□□□ -0.4
LSM3YLR438C-A BAT1P38891 393 aaKnown RBP12.55□□□□□ -0.4
LSM3YLR438C-A SEC31P38968 1273 aaKnown RBP12.55□□□□□ -0.4
LSM3YLR438C-A CCT6P39079 546 aa12.55□□□□□ -0.4
LSM3YLR438C-A SNO2P53823 222 aa12.55□□□□□ -0.4
LSM3YLR438C-A LSM3P57743 89 aaKnown RBP12.55□□□□□ -0.4
LSM3YLR438C-A GRS2Q06817 618 aa12.55□□□□□ -0.4
LSM3YLR438C-A YPL247CQ12523 523 aa12.55□□□□□ -0.4
LSM3YLR438C-A YPT6Q99260 215 aa12.55□□□□□ -0.4
LSM3YLR438C-A RSC6P25632 483 aa12.54□□□□□ -0.4
LSM3YLR438C-A BZZ1P38822 633 aa12.54□□□□□ -0.4
LSM3YLR438C-A YHB1P39676 399 aaKnown RBP12.54□□□□□ -0.4
LSM3YLR438C-A MRM2P53123 320 aa12.54□□□□□ -0.4
LSM3YLR438C-A JIP5Q06214 492 aaPredicted RBP12.54□□□□□ -0.4
LSM3YLR438C-A NOB1Q08444 459 aaKnown RBP12.54□□□□□ -0.4
LSM3YLR438C-A UPC2Q12151 913 aa12.54□□□□□ -0.4
LSM3YLR438C-A STB3Q12427 513 aa12.54□□□□□ -0.4
LSM3YLR438C-A NAG1Q8TGN9 163 aa12.54□□□□□ -0.4
LSM3YLR438C-A UBR1P19812 1950 aa12.54□□□□□ -0.4
LSM3YLR438C-A ART10P18634 518 aaKnown RBP12.53□□□□□ -0.4
LSM3YLR438C-A YHR020WP38708 688 aaKnown RBP12.53□□□□□ -0.4
LSM3YLR438C-A DHH1P39517 506 aaKnown RBP12.53□□□□□ -0.4
LSM3YLR438C-A UTP18P40362 594 aaPredicted RBP12.53□□□□□ -0.4
LSM3YLR438C-A UBP6P43593 499 aaKnown RBP12.53□□□□□ -0.4
LSM3YLR438C-A RNR4P49723 345 aaKnown RBP12.53□□□□□ -0.4
LSM3YLR438C-A MTO1P53070 669 aa12.53□□□□□ -0.4
LSM3YLR438C-A CAF120P53836 1060 aa12.53□□□□□ -0.4
LSM3YLR438C-A IBD2P53892 351 aa12.53□□□□□ -0.4
LSM3YLR438C-A YPL113CQ02961 396 aa12.53□□□□□ -0.4
LSM3YLR438C-A ENT4Q07872 247 aa12.53□□□□□ -0.4
LSM3YLR438C-A VPS68Q12016 184 aa12.53□□□□□ -0.4
LSM3YLR438C-A INH1P01097 85 aa12.52□□□□□ -0.41
LSM3YLR438C-A CLB1P24868 471 aa12.52□□□□□ -0.41
LSM3YLR438C-A SIS1P25294 352 aaKnown RBP12.52□□□□□ -0.41
LSM3YLR438C-A LRG1P35688 1017 aa12.52□□□□□ -0.41
LSM3YLR438C-A NUP120P35729 1037 aa12.52□□□□□ -0.41
LSM3YLR438C-A EAP1P36041 632 aaKnown RBP12.52□□□□□ -0.41
LSM3YLR438C-A HEK2P38199 381 aaKnown RBP RIP-Chip data12.52□□□□□ -0.41not detected
LSM3YLR438C-A HSE1P38753 452 aa12.52□□□□□ -0.41
LSM3YLR438C-A YHR045WP38775 560 aa12.52□□□□□ -0.41
LSM3YLR438C-A PCF11P39081 626 aaPredicted RBP12.52□□□□□ -0.41
LSM3YLR438C-A BIR1P47134 954 aa12.52□□□□□ -0.41
LSM3YLR438C-A ZRG17P53735 605 aa12.52□□□□□ -0.41
LSM3YLR438C-A SLM2P53955 656 aa12.52□□□□□ -0.41
LSM3YLR438C-A VPS16Q03308 798 aa12.52□□□□□ -0.41
LSM3YLR438C-A BCH1Q05029 724 aa12.52□□□□□ -0.41
LSM3YLR438C-A HDA3Q06623 655 aa12.52□□□□□ -0.41
LSM3YLR438C-A VAM6Q07468 1049 aa12.52□□□□□ -0.41
LSM3YLR438C-A YLL032CQ07834 825 aaKnown RBP RIP-Chip data12.52□□□□□ -0.41not detected
LSM3YLR438C-A TFB4Q12004 338 aa12.52□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms