RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeastyeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIC1YLR039C YJR112W-AQ3E743 109 aa2.16□□□□□ -2.06
RIC1YLR039C BI2P03873 423 aa2.16□□□□□ -2.06
RIC1YLR039C LCB1P25045 558 aaKnown RBP2.16□□□□□ -2.06
RIC1YLR039C RPC53P25441 422 aa2.16□□□□□ -2.06
RIC1YLR039C SAS3P34218 831 aa2.16□□□□□ -2.06
RIC1YLR039C DIA4P38705 446 aaPredicted RBP2.16□□□□□ -2.06
RIC1YLR039C MET18P40469 1032 aa2.16□□□□□ -2.06
RIC1YLR039C JJJ1P53863 590 aa2.16□□□□□ -2.06
RIC1YLR039C IPI3P53877 555 aa2.16□□□□□ -2.06
RIC1YLR039C BUD22Q04347 519 aaKnown RBP2.16□□□□□ -2.06
RIC1YLR039C DPB4Q04603 196 aaKnown RBP2.16□□□□□ -2.06
RIC1YLR039C BSP1Q06604 576 aa2.16□□□□□ -2.06
RIC1YLR039C FRE3Q08905 711 aa2.16□□□□□ -2.06
RIC1YLR039C RLM1Q12224 676 aa2.16□□□□□ -2.06
RIC1YLR039C ATG2P53855 1592 aa2.16□□□□□ -2.06
RIC1YLR039C ELO2P25358 347 aa2.16□□□□□ -2.06
RIC1YLR039C OCA4P25366 362 aa2.16□□□□□ -2.06
RIC1YLR039C NPL6P32832 435 aa2.16□□□□□ -2.06
RIC1YLR039C TCD2P36101 447 aaKnown RBP2.16□□□□□ -2.06
RIC1YLR039C SMF1P38925 575 aa2.16□□□□□ -2.06
RIC1YLR039C VPS41P38959 992 aa2.16□□□□□ -2.06
RIC1YLR039C PKP1P40530 394 aa2.16□□□□□ -2.06
RIC1YLR039C DIA3P52290 468 aa2.16□□□□□ -2.06
RIC1YLR039C EFM6P53970 246 aa2.16□□□□□ -2.06
RIC1YLR039C ASI1P54074 624 aa2.16□□□□□ -2.06
RIC1YLR039C MSC1Q03104 513 aa2.16□□□□□ -2.06
RIC1YLR039C ADE13Q05911 482 aaKnown RBP2.16□□□□□ -2.06
RIC1YLR039C VPS38Q05919 439 aa2.16□□□□□ -2.06
RIC1YLR039C TPO3Q06451 622 aa2.16□□□□□ -2.06
RIC1YLR039C SNU66Q12420 587 aaPredicted RBP2.16□□□□□ -2.06
RIC1YLR039C YMR085WP0CF18 432 aa2.15□□□□□ -2.06
RIC1YLR039C PUP3P25451 205 aaKnown RBP2.15□□□□□ -2.06
RIC1YLR039C SSE2P32590 693 aaKnown RBP2.15□□□□□ -2.06
RIC1YLR039C PEX2P32800 271 aa2.15□□□□□ -2.06
RIC1YLR039C WBP1P33767 430 aaKnown RBP2.15□□□□□ -2.06
RIC1YLR039C AGP2P38090 596 aa2.15□□□□□ -2.06
RIC1YLR039C RPN11P43588 306 aaKnown RBP2.15□□□□□ -2.06
RIC1YLR039C ATP23P53722 227 aa2.15□□□□□ -2.06
RIC1YLR039C YDR131CQ03899 556 aa2.15□□□□□ -2.06
RIC1YLR039C COQ9Q05779 260 aa2.15□□□□□ -2.06
RIC1YLR039C MRD1Q06106 887 aaKnown RBP2.15□□□□□ -2.06
RIC1YLR039C GRC3Q07845 632 aa2.15□□□□□ -2.06
RIC1YLR039C ISN1Q99312 450 aa2.15□□□□□ -2.06
RIC1YLR039C MDS3P53094 1487 aa2.15□□□□□ -2.07
RIC1YLR039C NUP1P20676 1076 aa2.15□□□□□ -2.07
RIC1YLR039C STE50P25344 346 aa2.15□□□□□ -2.07
RIC1YLR039C UIP3P39547 235 aa2.15□□□□□ -2.07
RIC1YLR039C AXL1P40851 1208 aa2.15□□□□□ -2.07
RIC1YLR039C STU2P46675 888 aa2.15□□□□□ -2.07
RIC1YLR039C PET130P47065 347 aa2.15□□□□□ -2.07
RIC1YLR039C NNF2P53253 936 aa2.15□□□□□ -2.07
RIC1YLR039C IST1P53843 298 aaPredicted RBP2.15□□□□□ -2.07
RIC1YLR039C EAF7P53911 425 aaKnown RBP2.15□□□□□ -2.07
RIC1YLR039C SPC19Q03954 165 aa2.15□□□□□ -2.07
RIC1YLR039C PDR8Q06149 701 aa2.15□□□□□ -2.07
RIC1YLR039C TEN1Q07921 160 aa2.15□□□□□ -2.07
RIC1YLR039C ERG11P10614 530 aa2.14□□□□□ -2.07
RIC1YLR039C MRP2P10663 115 aaPredicted RBP2.14□□□□□ -2.07
RIC1YLR039C RAP1P11938 827 aa2.14□□□□□ -2.07
RIC1YLR039C MBR1P23493 339 aa2.14□□□□□ -2.07
RIC1YLR039C YBR144CP34215 104 aa2.14□□□□□ -2.07
RIC1YLR039C OCT1P35999 772 aa2.14□□□□□ -2.07
RIC1YLR039C TSC10P38342 320 aa2.14□□□□□ -2.07
RIC1YLR039C HXT9P40885 567 aa2.14□□□□□ -2.07
RIC1YLR039C YJL107CP42947 387 aa2.14□□□□□ -2.07
RIC1YLR039C ROK1P45818 564 aaPredicted RBP2.14□□□□□ -2.07
RIC1YLR039C APT1P49435 187 aaKnown RBP2.14□□□□□ -2.07
RIC1YLR039C ORC5P50874 479 aa2.14□□□□□ -2.07
RIC1YLR039C MDG1P53885 366 aa2.14□□□□□ -2.07
RIC1YLR039C YLR345WQ06137 509 aa2.14□□□□□ -2.07
RIC1YLR039C PIG1Q06216 648 aa2.14□□□□□ -2.07
RIC1YLR039C FMP40Q08968 688 aaPredicted RBP2.14□□□□□ -2.07
RIC1YLR039C ESP1Q03018 1630 aa2.14□□□□□ -2.07
RIC1YLR039C REV3P14284 1504 aa2.14□□□□□ -2.07
RIC1YLR039C MF(ALPHA)1P01149 165 aa2.14□□□□□ -2.07
RIC1YLR039C VMA8P32610 256 aaKnown RBP2.14□□□□□ -2.07
RIC1YLR039C PMT1P33775 817 aa2.14□□□□□ -2.07
RIC1YLR039C NUP133P36161 1157 aa2.14□□□□□ -2.07
RIC1YLR039C BPL1P48445 690 aaPredicted RBP2.14□□□□□ -2.07
RIC1YLR039C YNL144CP53907 740 aa2.14□□□□□ -2.07
RIC1YLR039C MCH4Q08268 501 aa2.14□□□□□ -2.07
RIC1YLR039C YLR049CQ12110 428 aa2.14□□□□□ -2.07
RIC1YLR039C DFR1P07807 211 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
RIC1YLR039C PDA1P16387 420 aaKnown RBP2.14□□□□□ -2.07
RIC1YLR039C SGV1P23293 657 aaKnown RBP2.14□□□□□ -2.07
RIC1YLR039C ADH7P25377 361 aa2.14□□□□□ -2.07
RIC1YLR039C IMG1P25626 169 aa2.14□□□□□ -2.07
RIC1YLR039C YBL055CP34220 418 aaPredicted RBP2.14□□□□□ -2.07
RIC1YLR039C ARN1P38731 627 aa2.14□□□□□ -2.07
RIC1YLR039C YIL060WP40519 144 aa2.14□□□□□ -2.07
RIC1YLR039C GAT1P43574 510 aa2.14□□□□□ -2.07
RIC1YLR039C PKP2P53170 491 aa2.14□□□□□ -2.07
RIC1YLR039C YDR239CQ03780 787 aa2.14□□□□□ -2.07
RIC1YLR039C ARX1Q03862 593 aaKnown RBP2.14□□□□□ -2.07
RIC1YLR039C RBS1Q05672 457 aaKnown RBP2.14□□□□□ -2.07
RIC1YLR039C ECM22Q05958 814 aaPredicted RBP2.14□□□□□ -2.07
RIC1YLR039C RIM20Q12033 661 aa2.14□□□□□ -2.07
RIC1YLR039C TUB1P09733 447 aaKnown RBP2.13□□□□□ -2.07
RIC1YLR039C CLB2P24869 491 aa2.13□□□□□ -2.07
RIC1YLR039C MSS51P32335 436 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms