RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W YPQ1Q12010 308 aa5.46□□□□□ -1.54
CBF1YJR060W NDJ1Q12366 352 aa5.46□□□□□ -1.54
CBF1YJR060W EMP46Q12396 444 aa5.46□□□□□ -1.54
CBF1YJR060W PMS1P14242 873 aa5.45□□□□□ -1.54
CBF1YJR060W RPA135P22138 1203 aaKnown RBP5.45□□□□□ -1.54
CBF1YJR060W PUP3P25451 205 aaKnown RBP5.45□□□□□ -1.54
CBF1YJR060W SSH4P32343 579 aa5.45□□□□□ -1.54
CBF1YJR060W SGE1P33335 543 aa5.45□□□□□ -1.54
CBF1YJR060W ATG12P38316 186 aa5.45□□□□□ -1.54
CBF1YJR060W ASG7P46993 209 aa5.45□□□□□ -1.54
CBF1YJR060W YJR039WP47107 1121 aa5.45□□□□□ -1.54
CBF1YJR060W APT1P49435 187 aaKnown RBP5.45□□□□□ -1.54
CBF1YJR060W HOL1P53389 586 aa5.45□□□□□ -1.54
CBF1YJR060W SPG3Q04398 127 aaPredicted RBP5.45□□□□□ -1.54
CBF1YJR060W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54 RIP-Chip
CBF1YJR060W ERG11P10614 530 aa5.44□□□□□ -1.54
CBF1YJR060W MFT1P33441 392 aaKnown RBP5.44□□□□□ -1.54
CBF1YJR060W PCH2P38126 564 aa5.44□□□□□ -1.54
CBF1YJR060W YBR053CP38235 358 aa5.44□□□□□ -1.54
CBF1YJR060W EXO84P38261 753 aa5.44□□□□□ -1.54
CBF1YJR060W PCA1P38360 1216 aa5.44□□□□□ -1.54
CBF1YJR060W SSZ1P38788 538 aaKnown RBP5.44□□□□□ -1.54
CBF1YJR060W PRM9P39551 298 aa5.44□□□□□ -1.54
CBF1YJR060W YER189WP40104 122 aa5.44□□□□□ -1.54
CBF1YJR060W SEC9P40357 651 aa5.44□□□□□ -1.54
CBF1YJR060W YIL161WP40449 235 aaKnown RBP5.44□□□□□ -1.54
CBF1YJR060W YIL054WP40524 105 aa5.44□□□□□ -1.54
CBF1YJR060W UFE1P41834 346 aa5.44□□□□□ -1.54
CBF1YJR060W QRI7P43122 407 aa5.44□□□□□ -1.54
CBF1YJR060W SSY5P47002 699 aa5.44□□□□□ -1.54
CBF1YJR060W RTT101P47050 842 aa5.44□□□□□ -1.54
CBF1YJR060W GYL1Q04322 720 aa5.44□□□□□ -1.54
CBF1YJR060W UFO1Q04511 668 aa5.44□□□□□ -1.54
CBF1YJR060W TMN2Q04562 672 aa5.44□□□□□ -1.54
CBF1YJR060W GRX8Q05926 109 aa5.44□□□□□ -1.54
CBF1YJR060W YOL114CQ12322 202 aa5.44□□□□□ -1.54
CBF1YJR060W ARP7Q12406 477 aa5.44□□□□□ -1.54
CBF1YJR060W MSS18P08593 268 aa5.43□□□□□ -1.54
CBF1YJR060W ATP12P22135 325 aa5.43□□□□□ -1.54
CBF1YJR060W TRX1P22217 103 aaKnown RBP5.43□□□□□ -1.54
CBF1YJR060W PPH22P23595 377 aa5.43□□□□□ -1.54
CBF1YJR060W HCM1P25364 564 aa5.43□□□□□ -1.54
CBF1YJR060W SGF29P25554 259 aa5.43□□□□□ -1.54
CBF1YJR060W YIH1P25637 258 aa5.43□□□□□ -1.54
CBF1YJR060W PPZ1P26570 692 aa5.43□□□□□ -1.54
CBF1YJR060W STE14P32584 239 aa5.43□□□□□ -1.54
CBF1YJR060W KAP104P38217 918 aaKnown RBP5.43□□□□□ -1.54
CBF1YJR060W RRT2P38332 387 aa5.43□□□□□ -1.54
CBF1YJR060W KHA1P40309 873 aa5.43□□□□□ -1.54
CBF1YJR060W SDP1P40479 209 aa5.43□□□□□ -1.54
CBF1YJR060W MTR3P48240 250 aaPredicted RBP5.43□□□□□ -1.54
CBF1YJR060W MRX6P48564 524 aa5.43□□□□□ -1.54
CBF1YJR060W BRO1P48582 844 aa5.43□□□□□ -1.54
CBF1YJR060W EXG2P52911 562 aa5.43□□□□□ -1.54
CBF1YJR060W ARP4P80428 489 aa5.43□□□□□ -1.54
CBF1YJR060W PIR3Q03180 325 aa5.43□□□□□ -1.54
CBF1YJR060W KAP95Q06142 861 aaKnown RBP5.43□□□□□ -1.54
CBF1YJR060W VAC14Q06708 880 aa5.43□□□□□ -1.54
CBF1YJR060W SIL1Q08199 421 aa5.43□□□□□ -1.54
CBF1YJR060W LCB4Q12246 624 aa5.43□□□□□ -1.54
CBF1YJR060W YLR462WO13556 202 aa5.42□□□□□ -1.54
CBF1YJR060W HIS1P00498 297 aaKnown RBP5.42□□□□□ -1.54
CBF1YJR060W GLN4P13188 809 aaKnown RBP5.42□□□□□ -1.54
CBF1YJR060W PET123P17558 318 aa5.42□□□□□ -1.54
CBF1YJR060W MET16P18408 261 aaPredicted RBP5.42□□□□□ -1.54
CBF1YJR060W YEL043WP32618 956 aa5.42□□□□□ -1.54
CBF1YJR060W YBL055CP34220 418 aaPredicted RBP5.42□□□□□ -1.54
CBF1YJR060W TIF5P38431 405 aaKnown RBP5.42□□□□□ -1.54
CBF1YJR060W YHL049CP38722 271 aa5.42□□□□□ -1.54
CBF1YJR060W SAW1P39735 261 aa5.42□□□□□ -1.54
CBF1YJR060W NDC80P40460 691 aa5.42□□□□□ -1.54
CBF1YJR060W ASG1P40467 964 aa5.42□□□□□ -1.54
CBF1YJR060W CHS6P40955 746 aa5.42□□□□□ -1.54
CBF1YJR060W YFL064CP43540 174 aa5.42□□□□□ -1.54
CBF1YJR060W YJL132WP47014 750 aa5.42□□□□□ -1.54
CBF1YJR060W ASK10P48361 1146 aa5.42□□□□□ -1.54
CBF1YJR060W IMP4P53941 290 aaKnown RBP5.42□□□□□ -1.54
CBF1YJR060W YNL040WP53960 456 aaPredicted RBP5.42□□□□□ -1.54
CBF1YJR060W KTR6P54070 446 aa5.42□□□□□ -1.54
CBF1YJR060W VPS9P54787 451 aa5.42□□□□□ -1.54
CBF1YJR060W YPL014WQ02606 381 aa5.42□□□□□ -1.54
CBF1YJR060W NGL3Q03210 505 aa5.42□□□□□ -1.54
CBF1YJR060W RTN1Q04947 295 aaKnown RBP5.42□□□□□ -1.54
CBF1YJR060W SML1Q04964 104 aa5.42□□□□□ -1.54
CBF1YJR060W IRC10Q08118 586 aa5.42□□□□□ -1.54
CBF1YJR060W NUR1Q12066 484 aa5.42□□□□□ -1.54
CBF1YJR060W PDH1Q12428 516 aaKnown RBP5.42□□□□□ -1.54
CBF1YJR060W YBL111CQ3E7Y5 667 aa5.42□□□□□ -1.54
CBF1YJR060W PAB1P04147 577 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
CBF1YJR060W TUB3P09734 445 aaKnown RBP5.41□□□□□ -1.54
CBF1YJR060W SIR1P21691 654 aa5.41□□□□□ -1.54
CBF1YJR060W KAR4P25583 335 aa5.41□□□□□ -1.54
CBF1YJR060W MSH1P25846 959 aa5.41□□□□□ -1.54
CBF1YJR060W DCG1P32460 244 aa5.41□□□□□ -1.54
CBF1YJR060W FSH1P38777 243 aaKnown RBP5.41□□□□□ -1.54
CBF1YJR060W YHR078WP38799 552 aa5.41□□□□□ -1.54
CBF1YJR060W CTF8P38877 133 aa5.41□□□□□ -1.54
CBF1YJR060W SAK1P38990 1142 aa5.41□□□□□ -1.54
CBF1YJR060W BEM4P39011 633 aa5.41□□□□□ -1.54
CBF1YJR060W LCP5P40079 357 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms