RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W SYN8P31377 255 aa11.14□□□□□ -0.63
SIM1YIL123W PTC1P35182 281 aa11.14□□□□□ -0.63
SIM1YIL123W EFM1P38732 585 aa11.14□□□□□ -0.63
SIM1YIL123W YHR045WP38775 560 aa11.14□□□□□ -0.63
SIM1YIL123W GGA2P38817 585 aaKnown RBP11.14□□□□□ -0.63
SIM1YIL123W UTP9P38882 575 aaKnown RBP11.14□□□□□ -0.63
SIM1YIL123W NSE5Q03718 556 aa11.14□□□□□ -0.63
SIM1YIL123W ZIP1P31111 875 aa11.13□□□□□ -0.63
SIM1YIL123W SWH1P35845 1188 aa11.13□□□□□ -0.63
SIM1YIL123W ARP1P38696 384 aa11.13□□□□□ -0.63
SIM1YIL123W PEX28P38848 579 aa11.13□□□□□ -0.63
SIM1YIL123W YEN1P40028 759 aa11.13□□□□□ -0.63
SIM1YIL123W YJR154WP47181 346 aa11.13□□□□□ -0.63
SIM1YIL123W IMA1P53051 589 aa11.13□□□□□ -0.63
SIM1YIL123W TRP3P00937 484 aa11.12□□□□□ -0.63
SIM1YIL123W BUB2P26448 306 aaPredicted RBP11.12□□□□□ -0.63
SIM1YIL123W PHO91P27514 894 aa11.12□□□□□ -0.63
SIM1YIL123W MRPL9P31334 269 aa11.12□□□□□ -0.63
SIM1YIL123W TFC1P32367 649 aa11.12□□□□□ -0.63
SIM1YIL123W THI80P35202 319 aa11.12□□□□□ -0.63
SIM1YIL123W MPT5P39016 859 aaKnown RBP RIP-Chip data11.12□□□□□ -0.63not detected
SIM1YIL123W MEP1P40260 492 aa11.12□□□□□ -0.63
SIM1YIL123W PRM1P53835 661 aa11.12□□□□□ -0.63
SIM1YIL123W ARP4P80428 489 aa11.12□□□□□ -0.63
SIM1YIL123W LEE1Q02799 301 aaKnown RBP11.12□□□□□ -0.63
SIM1YIL123W YLR413WQ06689 675 aa11.12□□□□□ -0.63
SIM1YIL123W UPC2Q12151 913 aa11.12□□□□□ -0.63
SIM1YIL123W YOR338WQ99326 363 aa11.12□□□□□ -0.63
SIM1YIL123W ATP6P00854 259 aa11.11□□□□□ -0.63
SIM1YIL123W GCD2P12754 651 aaPredicted RBP11.11□□□□□ -0.63
SIM1YIL123W CCR4P31384 837 aaKnown RBP11.11□□□□□ -0.63
SIM1YIL123W CSE1P33307 960 aa11.11□□□□□ -0.63
SIM1YIL123W FRE2P36033 711 aa11.11□□□□□ -0.63
SIM1YIL123W DUN1P39009 513 aa11.11□□□□□ -0.63
SIM1YIL123W RPH1P39956 796 aa11.11□□□□□ -0.63
SIM1YIL123W FMP33P46998 180 aa11.11□□□□□ -0.63
SIM1YIL123W YJR124CP47159 448 aa11.11□□□□□ -0.63
SIM1YIL123W SPC105P53148 917 aa11.11□□□□□ -0.63
SIM1YIL123W SHY1P53266 389 aa11.11□□□□□ -0.63
SIM1YIL123W ARC35P53731 342 aaKnown RBP11.11□□□□□ -0.63
SIM1YIL123W DYN3Q04949 312 aa11.11□□□□□ -0.63
SIM1YIL123W RIF2Q06208 395 aa11.11□□□□□ -0.63
SIM1YIL123W ATG26Q06321 1198 aa11.11□□□□□ -0.63
SIM1YIL123W VAM6Q07468 1049 aa11.11□□□□□ -0.63
SIM1YIL123W PSR1Q07800 427 aa11.11□□□□□ -0.63
SIM1YIL123W CLP1Q08685 445 aaPredicted RBP11.11□□□□□ -0.63
SIM1YIL123W GPB1Q08886 897 aa11.11□□□□□ -0.63
SIM1YIL123W YLR049CQ12110 428 aa11.11□□□□□ -0.63
SIM1YIL123W NSL1Q12143 216 aa11.11□□□□□ -0.63
SIM1YIL123W RUP1Q12242 671 aa11.11□□□□□ -0.63
SIM1YIL123W LEU1P07264 779 aaKnown RBP11.1□□□□□ -0.63
SIM1YIL123W CSM1P25651 190 aa11.1□□□□□ -0.63
SIM1YIL123W YBL029WP38201 376 aa11.1□□□□□ -0.63
SIM1YIL123W MET18P40469 1032 aa11.1□□□□□ -0.63
SIM1YIL123W HPM1P40481 377 aa11.1□□□□□ -0.63
SIM1YIL123W MOB1P40484 314 aa11.1□□□□□ -0.63
SIM1YIL123W TUB4P53378 473 aa11.1□□□□□ -0.63
SIM1YIL123W GGA1Q06336 557 aa11.1□□□□□ -0.63
SIM1YIL123W IRC10Q08118 586 aa11.1□□□□□ -0.63
SIM1YIL123W PER33Q12144 273 aa11.1□□□□□ -0.63
SIM1YIL123W AHC1Q12433 566 aa11.1□□□□□ -0.63
SIM1YIL123W NHA1Q99271 985 aa11.1□□□□□ -0.63
SIM1YIL123W SAS5Q99314 248 aa11.1□□□□□ -0.63
SIM1YIL123W RPS1AP33442 255 aaKnown RBP11.09□□□□□ -0.63
SIM1YIL123W AST1P35183 429 aa11.09□□□□□ -0.63
SIM1YIL123W IRS4P36115 615 aaKnown RBP11.09□□□□□ -0.63
SIM1YIL123W YRB1P41920 201 aaKnown RBP11.09□□□□□ -0.63
SIM1YIL123W MNT2P53059 558 aa11.09□□□□□ -0.63
SIM1YIL123W PEX13P80667 386 aa11.09□□□□□ -0.63
SIM1YIL123W TRM12Q04235 462 aa11.09□□□□□ -0.63
SIM1YIL123W ASA1Q06822 443 aa11.09□□□□□ -0.63
SIM1YIL123W MEU1Q07938 337 aaKnown RBP RIP-Chip data11.09□□□□□ -0.63not detected
SIM1YIL123W ADF1Q2V2Q1 113 aa11.09□□□□□ -0.63
SIM1YIL123W TIP20P33891 701 aa11.09□□□□□ -0.63
SIM1YIL123W FTH1P38310 465 aa11.09□□□□□ -0.63
SIM1YIL123W PIK1P39104 1066 aa11.09□□□□□ -0.63
SIM1YIL123W DHH1P39517 506 aaKnown RBP11.09□□□□□ -0.63
SIM1YIL123W FKH2P41813 862 aa11.09□□□□□ -0.63
SIM1YIL123W NAS6P50086 228 aa11.09□□□□□ -0.63
SIM1YIL123W YGR053CP53234 283 aa11.09□□□□□ -0.63
SIM1YIL123W RPM2Q02773 1202 aa11.09□□□□□ -0.63
SIM1YIL123W VTA1Q06263 330 aa11.09□□□□□ -0.63
SIM1YIL123W SGT1Q08446 395 aa11.09□□□□□ -0.63
SIM1YIL123W UAF30Q08747 228 aa11.09□□□□□ -0.63
SIM1YIL123W TGL5Q12043 749 aa11.09□□□□□ -0.63
SIM1YIL123W YOR012WQ12351 137 aa11.09□□□□□ -0.63
SIM1YIL123W SPT3P06844 337 aa11.08□□□□□ -0.64
SIM1YIL123W COS2P0CX12 379 aa11.08□□□□□ -0.64
SIM1YIL123W COS3P0CX13 379 aa11.08□□□□□ -0.64
SIM1YIL123W YAK1P14680 807 aa11.08□□□□□ -0.64
SIM1YIL123W APA1P16550 321 aaKnown RBP11.08□□□□□ -0.64
SIM1YIL123W KIN3P22209 435 aa11.08□□□□□ -0.64
SIM1YIL123W UBA1P22515 1024 aaKnown RBP11.08□□□□□ -0.64
SIM1YIL123W ATP7P30902 174 aa11.08□□□□□ -0.64
SIM1YIL123W SFP1P32432 683 aa11.08□□□□□ -0.64
SIM1YIL123W RIM101P33400 625 aa11.08□□□□□ -0.64
SIM1YIL123W PRP18P33411 251 aaPredicted RBP11.08□□□□□ -0.64
SIM1YIL123W GIP1P38229 639 aa11.08□□□□□ -0.64
SIM1YIL123W PPX1P38698 397 aa11.08□□□□□ -0.64
SIM1YIL123W COS4P43542 379 aa11.08□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms