RNA–Protein interactions for RNA: YHR004C

NEM1, Transcript of Probable catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme, yeast

Gene NEM1, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NEM1	YHR004C	CTK2	P46962	323 aa		4.12	□□□□□ -1.75
NEM1	YHR004C	ZAP1	P47043	880 aa		4.12	□□□□□ -1.75
NEM1	YHR004C	IWR1	Q07532	353 aa	Predicted RBP	4.12	□□□□□ -1.75
NEM1	YHR004C	HSP82	P02829	709 aa	Known RBP	4.11	□□□□□ -1.75
NEM1	YHR004C	PET111	P08468	800 aa		4.11	□□□□□ -1.75
NEM1	YHR004C	YDL218W	Q07629	317 aa		4.11	□□□□□ -1.75
NEM1	YHR004C	SSP2	Q08646	371 aa		4.11	□□□□□ -1.75
NEM1	YHR004C	ADE3	P07245	946 aa	Known RBP	4.1	□□□□□ -1.75
NEM1	YHR004C	MRP7	P12687	371 aa		4.1	□□□□□ -1.75
NEM1	YHR004C	SRP54	P20424	541 aa	Known RBP	4.1	□□□□□ -1.75
NEM1	YHR004C	FAF1	P40546	346 aa	Predicted RBP	4.1	□□□□□ -1.75
NEM1	YHR004C	CEG1	Q01159	459 aa	Predicted RBP	4.1	□□□□□ -1.75
NEM1	YHR004C	MAK10	Q02197	733 aa		4.1	□□□□□ -1.75
NEM1	YHR004C	YEH2	Q07950	538 aa		4.1	□□□□□ -1.75
NEM1	YHR004C	GDH1	P07262	454 aa	Known RBP	4.09	□□□□□ -1.75
NEM1	YHR004C	ERG1	P32476	496 aa	Known RBP	4.09	□□□□□ -1.75
NEM1	YHR004C	NUP120	P35729	1037 aa		4.09	□□□□□ -1.75
NEM1	YHR004C	ESL1	P40456	1118 aa		4.09	□□□□□ -1.75
NEM1	YHR004C	SGM1	P47166	707 aa		4.09	□□□□□ -1.75
NEM1	YHR004C	YDL186W	P48568	277 aa		4.09	□□□□□ -1.75
NEM1	YHR004C	PSK2	Q08217	1101 aa		4.09	□□□□□ -1.75
NEM1	YHR004C	MIS1	P09440	975 aa	Known RBP	4.08	□□□□□ -1.76
NEM1	YHR004C	MRS3	P10566	314 aa		4.08	□□□□□ -1.76
NEM1	YHR004C	MSM1	P22438	575 aa		4.08	□□□□□ -1.76
NEM1	YHR004C	YKL100C	P34248	587 aa		4.08	□□□□□ -1.76
NEM1	YHR004C	PSY4	P38193	441 aa		4.08	□□□□□ -1.76
NEM1	YHR004C	KAP123	P40069	1113 aa	Known RBP	4.08	□□□□□ -1.76
NEM1	YHR004C	YIL161W	P40449	235 aa	Known RBP	4.08	□□□□□ -1.76
NEM1	YHR004C	IMA1	P53051	589 aa		4.08	□□□□□ -1.76
NEM1	YHR004C	ERO1	Q03103	563 aa		4.08	□□□□□ -1.76
NEM1	YHR004C	BLS1	Q06071	122 aa		4.08	□□□□□ -1.76
NEM1	YHR004C	YOL159C	Q08300	171 aa		4.08	□□□□□ -1.76
NEM1	YHR004C	YDR056C	Q12025	205 aa		4.08	□□□□□ -1.76
NEM1	YHR004C	ENT1	Q12518	454 aa		4.08	□□□□□ -1.76
NEM1	YHR004C	SPO16	P17122	198 aa		4.07	□□□□□ -1.76
NEM1	YHR004C	RPS2	P25443	254 aa	Known RBP	4.07	□□□□□ -1.76
NEM1	YHR004C	ARP2	P32381	391 aa	Known RBP	4.07	□□□□□ -1.76
NEM1	YHR004C	AAP1	P37898	856 aa	Known RBP	4.07	□□□□□ -1.76
NEM1	YHR004C	GUF1	P46943	645 aa		4.07	□□□□□ -1.76
NEM1	YHR004C	YTP1	P53584	459 aa		4.07	□□□□□ -1.76
NEM1	YHR004C	TRS130	Q03660	1102 aa		4.07	□□□□□ -1.76
NEM1	YHR004C	CSR1	Q06705	408 aa	Known RBP	4.07	□□□□□ -1.76
NEM1	YHR004C	HOM3	P10869	527 aa		4.06	□□□□□ -1.76
NEM1	YHR004C	APA1	P16550	321 aa	Known RBP	4.06	□□□□□ -1.76
NEM1	YHR004C	VPH1	P32563	840 aa	Known RBP	4.06	□□□□□ -1.76
NEM1	YHR004C	YJL213W	P40896	331 aa		4.06	□□□□□ -1.76
NEM1	YHR004C	RPN11	P43588	306 aa	Known RBP	4.06	□□□□□ -1.76
NEM1	YHR004C	NUP100	Q02629	959 aa		4.06	□□□□□ -1.76
NEM1	YHR004C	IMH1	Q06704	911 aa	Known RBP	4.06	□□□□□ -1.76
NEM1	YHR004C	MSS18	P08593	268 aa		4.05	□□□□□ -1.76
NEM1	YHR004C	FUR1	P18562	216 aa	Known RBP	4.05	□□□□□ -1.76
NEM1	YHR004C	GAC1	P28006	793 aa		4.05	□□□□□ -1.76
NEM1	YHR004C	ANP1	P32629	500 aa		4.05	□□□□□ -1.76
NEM1	YHR004C	XRS2	P33301	854 aa		4.05	□□□□□ -1.76
NEM1	YHR004C	LOS1	P33418	1100 aa	Predicted RBP	4.05	□□□□□ -1.76
NEM1	YHR004C	FSH1	P38777	243 aa	Known RBP	4.05	□□□□□ -1.76
NEM1	YHR004C	PHO90	P39535	881 aa		4.05	□□□□□ -1.76
NEM1	YHR004C	ATP22	P50273	684 aa	Predicted RBP	4.05	□□□□□ -1.76
NEM1	YHR004C	RSC1	P53236	928 aa		4.05	□□□□□ -1.76
NEM1	YHR004C	RBG2	P53295	368 aa	Known RBP	4.05	□□□□□ -1.76
NEM1	YHR004C	YLR287C	Q05881	355 aa		4.05	□□□□□ -1.76
NEM1	YHR004C	CRN1	Q06440	651 aa		4.05	□□□□□ -1.76
NEM1	YHR004C	SCM3	Q12334	223 aa		4.05	□□□□□ -1.76
NEM1	YHR004C	DAL5	P15365	543 aa		4.04	□□□□□ -1.76
NEM1	YHR004C	PGS1	P25578	521 aa		4.04	□□□□□ -1.76
NEM1	YHR004C	CMK1	P27466	446 aa	Known RBP	4.04	□□□□□ -1.76
NEM1	YHR004C	VMA8	P32610	256 aa	Known RBP	4.04	□□□□□ -1.76
NEM1	YHR004C	APE4	P38821	490 aa		4.04	□□□□□ -1.76
NEM1	YHR004C	CAJ1	P39101	391 aa		4.04	□□□□□ -1.76
NEM1	YHR004C	TEP1	P53916	434 aa		4.04	□□□□□ -1.76
NEM1	YHR004C	GTR1	Q00582	310 aa		4.04	□□□□□ -1.76
NEM1	YHR004C	EIS1	Q05050	843 aa	Known RBP	4.04	□□□□□ -1.76
NEM1	YHR004C	HCR1	Q05775	265 aa	Known RBP	4.04	□□□□□ -1.76
NEM1	YHR004C	STP3	Q05937	343 aa		4.04	□□□□□ -1.76
NEM1	YHR004C	YOL114C	Q12322	202 aa		4.04	□□□□□ -1.76
NEM1	YHR004C	SPT7	P35177	1332 aa		4.04	□□□□□ -1.76
NEM1	YHR004C	KRR1	P25586	316 aa	Predicted RBP	4.03	□□□□□ -1.76
NEM1	YHR004C	NOP16	P40007	231 aa	Known RBP	4.03	□□□□□ -1.76
NEM1	YHR004C	SMK1	P41808	388 aa		4.03	□□□□□ -1.76
NEM1	YHR004C	GPD2	P41911	440 aa	Known RBP	4.03	□□□□□ -1.76
NEM1	YHR004C	IKS1	P47042	667 aa		4.03	□□□□□ -1.76
NEM1	YHR004C	YGL082W	P53155	381 aa		4.03	□□□□□ -1.76
NEM1	YHR004C	MEP3	P53390	489 aa		4.03	□□□□□ -1.76
NEM1	YHR004C	TDA7	P53882	636 aa	Predicted RBP	4.03	□□□□□ -1.76
NEM1	YHR004C	HIM1	Q06674	414 aa		4.03	□□□□□ -1.76
NEM1	YHR004C	SDH5	Q08230	162 aa		4.03	□□□□□ -1.76
NEM1	YHR004C	RPL15A	P05748	204 aa	Known RBP	4.02	□□□□□ -1.77
NEM1	YHR004C	SWI4	P25302	1093 aa	Known RBP	4.02	□□□□□ -1.77
NEM1	YHR004C	BRF1	P29056	596 aa		4.02	□□□□□ -1.77
NEM1	YHR004C	NTR2	P36118	322 aa	Predicted RBP	4.02	□□□□□ -1.77
NEM1	YHR004C	SPC34	P36131	295 aa		4.02	□□□□□ -1.77
NEM1	YHR004C	NOP4	P37838	685 aa	Known RBP	4.02	□□□□□ -1.77
NEM1	YHR004C	ECM10	P39987	644 aa		4.02	□□□□□ -1.77
NEM1	YHR004C	YML6	P51998	286 aa		4.02	□□□□□ -1.77
NEM1	YHR004C	RSM28	Q03430	361 aa		4.02	□□□□□ -1.77
NEM1	YHR004C	ARP6	Q12509	438 aa		4.02	□□□□□ -1.77
NEM1	YHR004C	SMC6	Q12749	1114 aa		4.02	□□□□□ -1.77
NEM1	YHR004C	HSH49	Q99181	213 aa	Predicted RBP	4.02	□□□□□ -1.77
NEM1	YHR004C	DBF4	P32325	704 aa		4.01	□□□□□ -1.77
NEM1	YHR004C	SLC1	P33333	303 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms