RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C RSC3Q06639 885 aa7.16□□□□□ -1.26
PUP2YGR253C YOL024WQ08172 172 aa7.16□□□□□ -1.26
PUP2YGR253C SLD7Q08457 257 aa7.16□□□□□ -1.26
PUP2YGR253C MSL5Q12186 476 aaKnown RBP RIP-Chip data7.16□□□□□ -1.26not detected
PUP2YGR253C CMR1Q12510 522 aaKnown RBP7.16□□□□□ -1.26
PUP2YGR253C HRP1Q99383 534 aaKnown RBP7.16□□□□□ -1.26
PUP2YGR253C STT4P37297 1900 aa7.15□□□□□ -1.26
PUP2YGR253C SWI5P08153 709 aa7.15□□□□□ -1.26
PUP2YGR253C ERG20P08524 352 aaKnown RBP7.15□□□□□ -1.26
PUP2YGR253C YCL068CP25593 260 aa7.15□□□□□ -1.26
PUP2YGR253C YCR099CP25657 155 aa7.15□□□□□ -1.26
PUP2YGR253C GUT2P32191 649 aa7.15□□□□□ -1.26
PUP2YGR253C SIN4P32259 974 aa7.15□□□□□ -1.26
PUP2YGR253C ATP11P32453 318 aa7.15□□□□□ -1.26
PUP2YGR253C SMI1P32566 505 aa7.15□□□□□ -1.26
PUP2YGR253C SRB4P32569 687 aa7.15□□□□□ -1.26
PUP2YGR253C MCX1P38323 520 aaPredicted RBP7.15□□□□□ -1.26
PUP2YGR253C MEF2P39677 819 aa7.15□□□□□ -1.26
PUP2YGR253C SEC9P40357 651 aa7.15□□□□□ -1.26
PUP2YGR253C ALA1P40825 983 aaKnown RBP7.15□□□□□ -1.26
PUP2YGR253C TFG1P41895 735 aaPredicted RBP7.15□□□□□ -1.26
PUP2YGR253C IKS1P47042 667 aa7.15□□□□□ -1.26
PUP2YGR253C ALF1P53904 254 aa7.15□□□□□ -1.26
PUP2YGR253C RMD5Q12508 421 aa7.15□□□□□ -1.26
PUP2YGR253C IMA3P0CW40 589 aa7.14□□□□□ -1.27
PUP2YGR253C IMA4P0CW41 589 aa7.14□□□□□ -1.27
PUP2YGR253C NSP1P14907 823 aaKnown RBP7.14□□□□□ -1.27
PUP2YGR253C CKI1P20485 582 aa7.14□□□□□ -1.27
PUP2YGR253C MEI5P32489 222 aa7.14□□□□□ -1.27
PUP2YGR253C PET112P33893 541 aa7.14□□□□□ -1.27
PUP2YGR253C MSG5P38590 489 aa7.14□□□□□ -1.27
PUP2YGR253C PFA3P42836 336 aa7.14□□□□□ -1.27
PUP2YGR253C ASK10P48361 1146 aa7.14□□□□□ -1.27
PUP2YGR253C ESF2P53743 316 aaKnown RBP7.14□□□□□ -1.27
PUP2YGR253C EAF7P53911 425 aaKnown RBP7.14□□□□□ -1.27
PUP2YGR253C TFB2Q02939 513 aa7.14□□□□□ -1.27
PUP2YGR253C MTG1Q03151 367 aaPredicted RBP7.14□□□□□ -1.27
PUP2YGR253C NHX1Q04121 633 aa7.14□□□□□ -1.27
PUP2YGR253C TRM12Q04235 462 aa7.14□□□□□ -1.27
PUP2YGR253C YDR109CQ04585 715 aa7.14□□□□□ -1.27
PUP2YGR253C RSF1Q05043 376 aa7.14□□□□□ -1.27
PUP2YGR253C IMA2Q08295 589 aa7.14□□□□□ -1.27
PUP2YGR253C AIM41Q12032 185 aa7.14□□□□□ -1.27
PUP2YGR253C YPL066WQ12194 479 aa7.14□□□□□ -1.27
PUP2YGR253C RPL43AP0CX25 92 aaKnown RBP7.13□□□□□ -1.27
PUP2YGR253C RPL43BP0CX26 92 aa7.13□□□□□ -1.27
PUP2YGR253C GDA1P32621 518 aa7.13□□□□□ -1.27
PUP2YGR253C STO1P34160 861 aaKnown RBP7.13□□□□□ -1.27
PUP2YGR253C TOM20P35180 183 aa7.13□□□□□ -1.27
PUP2YGR253C CTP1P38152 299 aa7.13□□□□□ -1.27
PUP2YGR253C YHR045WP38775 560 aa7.13□□□□□ -1.27
PUP2YGR253C UBA4P38820 440 aa7.13□□□□□ -1.27
PUP2YGR253C PLB1P39105 664 aa7.13□□□□□ -1.27
PUP2YGR253C UTP18P40362 594 aaPredicted RBP7.13□□□□□ -1.27
PUP2YGR253C ELP2P42935 788 aa7.13□□□□□ -1.27
PUP2YGR253C YFL012WP43580 148 aa7.13□□□□□ -1.27
PUP2YGR253C YJL049WP47048 450 aa7.13□□□□□ -1.27
PUP2YGR253C TRM9P49957 279 aa7.13□□□□□ -1.27
PUP2YGR253C YGL260WP53056 76 aa7.13□□□□□ -1.27
PUP2YGR253C SGF73P53165 657 aa7.13□□□□□ -1.27
PUP2YGR253C CTR9P89105 1077 aa7.13□□□□□ -1.27
PUP2YGR253C PEX25Q02969 394 aa7.13□□□□□ -1.27
PUP2YGR253C TDA9Q04545 1251 aa7.13□□□□□ -1.27
PUP2YGR253C SSL1Q04673 461 aaPredicted RBP7.13□□□□□ -1.27
PUP2YGR253C CDA2Q06703 312 aa7.13□□□□□ -1.27
PUP2YGR253C MCD1Q12158 566 aa7.13□□□□□ -1.27
PUP2YGR253C LAG2Q92325 660 aa7.13□□□□□ -1.27
PUP2YGR253C FUR1P18562 216 aaKnown RBP7.12□□□□□ -1.27
PUP2YGR253C HSP60P19882 572 aaKnown RBP7.12□□□□□ -1.27
PUP2YGR253C VAC17P25591 423 aa7.12□□□□□ -1.27
PUP2YGR253C SFC1P33303 322 aa7.12□□□□□ -1.27
PUP2YGR253C TIP20P33891 701 aa7.12□□□□□ -1.27
PUP2YGR253C SEF1P34228 1148 aa7.12□□□□□ -1.27
PUP2YGR253C RRP1P35178 278 aaPredicted RBP7.12□□□□□ -1.27
PUP2YGR253C EBP2P36049 427 aaKnown RBP7.12□□□□□ -1.27
PUP2YGR253C PBP2P38151 413 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
PUP2YGR253C POP4P38336 279 aa7.12□□□□□ -1.27
PUP2YGR253C RIM11P38615 370 aa7.12□□□□□ -1.27
PUP2YGR253C YHR020WP38708 688 aaKnown RBP7.12□□□□□ -1.27
PUP2YGR253C YHR210CP38893 341 aa7.12□□□□□ -1.27
PUP2YGR253C MGS1P40151 587 aa7.12□□□□□ -1.27
PUP2YGR253C YJR030CP47101 745 aa7.12□□□□□ -1.27
PUP2YGR253C RTA1P53047 317 aa7.12□□□□□ -1.27
PUP2YGR253C RIM8P53179 542 aa7.12□□□□□ -1.27
PUP2YGR253C YPL272CQ08984 517 aa7.12□□□□□ -1.27
PUP2YGR253C YOL107WQ12239 342 aa7.12□□□□□ -1.27
PUP2YGR253C ZRT2Q12436 422 aa7.12□□□□□ -1.27
PUP2YGR253C PHO5P00635 467 aa7.11□□□□□ -1.27
PUP2YGR253C CMP2P14747 604 aa7.11□□□□□ -1.27
PUP2YGR253C PHO3P24031 467 aa7.11□□□□□ -1.27
PUP2YGR253C MGT1P26188 188 aa7.11□□□□□ -1.27
PUP2YGR253C GCD6P32501 712 aaKnown RBP7.11□□□□□ -1.27
PUP2YGR253C YPT52P36018 234 aaKnown RBP7.11□□□□□ -1.27
PUP2YGR253C FTH1P38310 465 aa7.11□□□□□ -1.27
PUP2YGR253C MMS21P38632 267 aa7.11□□□□□ -1.27
PUP2YGR253C BEM4P39011 633 aa7.11□□□□□ -1.27
PUP2YGR253C RPC17P47076 161 aa7.11□□□□□ -1.27
PUP2YGR253C ARH1P48360 493 aa7.11□□□□□ -1.27
PUP2YGR253C HSP42Q12329 375 aa7.11□□□□□ -1.27
PUP2YGR253C YLR111WQ12528 110 aa7.11□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms