RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C GCD7P32502 381 aaPredicted RBP3.15□□□□□ -1.9
MSH4YFL003C FLO10P36170 1169 aa3.15□□□□□ -1.9
MSH4YFL003C MET18P40469 1032 aa3.15□□□□□ -1.9
MSH4YFL003C RPN11P43588 306 aaKnown RBP3.15□□□□□ -1.9
MSH4YFL003C CTK2P46962 323 aa3.15□□□□□ -1.9
MSH4YFL003C CRT10Q08226 957 aa3.15□□□□□ -1.9
MSH4YFL003C YER145C-AA0A023PYF4 145 aa3.15□□□□□ -1.91
MSH4YFL003C RPF2P36160 344 aaKnown RBP3.15□□□□□ -1.91
MSH4YFL003C MUP3P38734 546 aa3.15□□□□□ -1.91
MSH4YFL003C PIH1P38768 344 aa3.15□□□□□ -1.91
MSH4YFL003C ECM10P39987 644 aa3.15□□□□□ -1.91
MSH4YFL003C HOS2P53096 452 aaPredicted RBP3.15□□□□□ -1.91
MSH4YFL003C EAF7P53911 425 aaKnown RBP3.15□□□□□ -1.91
MSH4YFL003C RPS10AQ08745 105 aaPredicted RBP3.15□□□□□ -1.91
MSH4YFL003C TRM732Q03496 1420 aa3.15□□□□□ -1.91
MSH4YFL003C TY1B-JR2P47100 1755 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C TY1B-ER2Q03619 1755 aa3.14□□□□□ -1.91
MSH4YFL003C TY1B-MR1Q04214 1755 aa3.14□□□□□ -1.91
MSH4YFL003C TY1B-MR2Q04670 1755 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C TY1B-LR1Q12088 1755 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C TY1B-NL1Q12112 1755 aa3.14□□□□□ -1.91
MSH4YFL003C TY1B-GR1Q12141 1755 aa3.14□□□□□ -1.91
MSH4YFL003C TY1B-BLQ12490 1755 aa3.14□□□□□ -1.91
MSH4YFL003C SEC53P07283 254 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C KRR1P25586 316 aaPredicted RBP3.14□□□□□ -1.91
MSH4YFL003C WBP1P33767 430 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C KTR3P38130 404 aaPredicted RBP3.14□□□□□ -1.91
MSH4YFL003C SEC31P38968 1273 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C ROK1P45818 564 aaPredicted RBP3.14□□□□□ -1.91
MSH4YFL003C DRN1P53255 507 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C YNL144CP53907 740 aa3.14□□□□□ -1.91
MSH4YFL003C MAK10Q02197 733 aa3.14□□□□□ -1.91
MSH4YFL003C HUA2Q12134 243 aa3.14□□□□□ -1.91
MSH4YFL003C AHA1Q12449 350 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C ERG27Q12452 347 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C YLR111WQ12528 110 aa3.14□□□□□ -1.91
MSH4YFL003C APE1P14904 514 aa3.14□□□□□ -1.91
MSH4YFL003C SGV1P23293 657 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C LCB1P25045 558 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C MRPL9P31334 269 aa3.14□□□□□ -1.91
MSH4YFL003C DBF4P32325 704 aa3.14□□□□□ -1.91
MSH4YFL003C ADE17P38009 592 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C CST26P38226 397 aa3.14□□□□□ -1.91
MSH4YFL003C YNG2P38806 282 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C SMF1P38925 575 aa3.14□□□□□ -1.91
MSH4YFL003C JEM1P40358 645 aa3.14□□□□□ -1.91
MSH4YFL003C CIN1P40987 1014 aa3.14□□□□□ -1.91
MSH4YFL003C COG2P53271 262 aa3.14□□□□□ -1.91
MSH4YFL003C ARP9Q05123 467 aa3.14□□□□□ -1.91
MSH4YFL003C MRD1Q06106 887 aaKnown RBP3.14□□□□□ -1.91
MSH4YFL003C LEA1Q08963 238 aaPredicted RBP3.14□□□□□ -1.91
MSH4YFL003C YBR085C-AO43137 85 aa3.13□□□□□ -1.91
MSH4YFL003C GSY2P27472 705 aa3.13□□□□□ -1.91
MSH4YFL003C SNU114P36048 1008 aaKnown RBP3.13□□□□□ -1.91
MSH4YFL003C ARX1Q03862 593 aaKnown RBP3.13□□□□□ -1.91
MSH4YFL003C TAP42Q04372 366 aa3.13□□□□□ -1.91
MSH4YFL003C RBS1Q05672 457 aaKnown RBP3.13□□□□□ -1.91
MSH4YFL003C LYS21Q12122 440 aaKnown RBP3.13□□□□□ -1.91
MSH4YFL003C NCE102Q12207 173 aaRIP-Chip data3.13□□□□□ -1.91not detected
MSH4YFL003C FRE7Q12333 620 aa3.13□□□□□ -1.91
MSH4YFL003C MMS22Q06164 1454 aa3.13□□□□□ -1.91
MSH4YFL003C DNF3Q12674 1656 aa3.13□□□□□ -1.91
MSH4YFL003C MRP13P12686 339 aa3.13□□□□□ -1.91
MSH4YFL003C UGP1P32861 499 aaKnown RBP3.13□□□□□ -1.91
MSH4YFL003C OAR1P35731 278 aa3.13□□□□□ -1.91
MSH4YFL003C VPS41P38959 992 aa3.13□□□□□ -1.91
MSH4YFL003C PAC2P39937 518 aa3.13□□□□□ -1.91
MSH4YFL003C LAS21P40367 830 aa3.13□□□□□ -1.91
MSH4YFL003C MPP10P47083 593 aaKnown RBP3.13□□□□□ -1.91
MSH4YFL003C APT1P49435 187 aaKnown RBP3.13□□□□□ -1.91
MSH4YFL003C YML037CQ03703 340 aa3.13□□□□□ -1.91
MSH4YFL003C LUC7Q07508 261 aaPredicted RBP3.13□□□□□ -1.91
MSH4YFL003C SPT7P35177 1332 aa3.13□□□□□ -1.91
MSH4YFL003C YPT1P01123 206 aaKnown RBP3.12□□□□□ -1.91
MSH4YFL003C GPA1P08539 472 aa3.12□□□□□ -1.91
MSH4YFL003C KIN3P22209 435 aa3.12□□□□□ -1.91
MSH4YFL003C GPI10P30777 616 aa3.12□□□□□ -1.91
MSH4YFL003C SWC3P31376 625 aa3.12□□□□□ -1.91
MSH4YFL003C SAS3P34218 831 aa3.12□□□□□ -1.91
MSH4YFL003C YKL100CP34248 587 aa3.12□□□□□ -1.91
MSH4YFL003C YBL029WP38201 376 aa3.12□□□□□ -1.91
MSH4YFL003C ELO1P39540 310 aa3.12□□□□□ -1.91
MSH4YFL003C FUN12P39730 1002 aaKnown RBP3.12□□□□□ -1.91
MSH4YFL003C YEL020CP39994 560 aa3.12□□□□□ -1.91
MSH4YFL003C RPS7BP48164 190 aaKnown RBP3.12□□□□□ -1.91
MSH4YFL003C KTR5P53966 522 aaPredicted RBP3.12□□□□□ -1.91
MSH4YFL003C VPS9P54787 451 aa3.12□□□□□ -1.91
MSH4YFL003C RPA49Q01080 415 aaPredicted RBP3.12□□□□□ -1.91
MSH4YFL003C RPT6Q01939 405 aaKnown RBP3.12□□□□□ -1.91
MSH4YFL003C HBT1Q07653 1046 aaKnown RBP3.12□□□□□ -1.91
MSH4YFL003C RCN2Q12044 265 aa3.12□□□□□ -1.91
MSH4YFL003C ULA1Q12059 462 aa3.12□□□□□ -1.91
MSH4YFL003C SIP1P32578 815 aa3.12□□□□□ -1.91
MSH4YFL003C PES4P39684 611 aa3.12□□□□□ -1.91
MSH4YFL003C YJL068CP40363 299 aa3.12□□□□□ -1.91
MSH4YFL003C YDR286CQ05530 114 aa3.12□□□□□ -1.91
MSH4YFL003C PGC1Q08959 321 aa3.12□□□□□ -1.91
MSH4YFL003C RLM1Q12224 676 aa3.12□□□□□ -1.91
MSH4YFL003C CYB2P00175 591 aa3.11□□□□□ -1.91
MSH4YFL003C GAL4P04386 881 aa3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms