RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C GAL11P19659 1081 aa7.75□□□□□ -1.17
PUP3YER094C SSE1P32589 693 aaKnown RBP7.75□□□□□ -1.17
PUP3YER094C CSE1P33307 960 aa7.75□□□□□ -1.17
PUP3YER094C PMT1P33775 817 aa7.75□□□□□ -1.17
PUP3YER094C ARP1P38696 384 aa7.75□□□□□ -1.17
PUP3YER094C PPX1P38698 397 aa7.75□□□□□ -1.17
PUP3YER094C TIM17P39515 158 aa7.75□□□□□ -1.17
PUP3YER094C YHB1P39676 399 aaKnown RBP7.75□□□□□ -1.17
PUP3YER094C NNF1P47149 201 aa7.75□□□□□ -1.17
PUP3YER094C NPL3Q01560 414 aaKnown RBP RIP-Chip data7.75□□□□□ -1.17 RIP-Chip
PUP3YER094C FMN1Q03778 218 aa7.75□□□□□ -1.17
PUP3YER094C RPC11Q04307 110 aaPredicted RBP7.75□□□□□ -1.17
PUP3YER094C SPC24Q04477 213 aa7.75□□□□□ -1.17
PUP3YER094C SSL1Q04673 461 aaPredicted RBP7.75□□□□□ -1.17
PUP3YER094C RCO1Q04779 684 aa7.75□□□□□ -1.17
PUP3YER094C GTT2Q12390 233 aa7.75□□□□□ -1.17
PUP3YER094C CPA1P07258 411 aaKnown RBP7.74□□□□□ -1.17
PUP3YER094C PMR1P13586 950 aa7.74□□□□□ -1.17
PUP3YER094C EPT1P22140 391 aa7.74□□□□□ -1.17
PUP3YER094C TIP20P33891 701 aa7.74□□□□□ -1.17
PUP3YER094C NUP120P35729 1037 aa7.74□□□□□ -1.17
PUP3YER094C DCW1P36091 449 aa7.74□□□□□ -1.17
PUP3YER094C DBP8P38719 431 aa7.74□□□□□ -1.17
PUP3YER094C DHH1P39517 506 aaKnown RBP7.74□□□□□ -1.17
PUP3YER094C FRT2P39734 528 aa7.74□□□□□ -1.17
PUP3YER094C COA1P40452 197 aa7.74□□□□□ -1.17
PUP3YER094C YFR018CP43599 363 aa7.74□□□□□ -1.17
PUP3YER094C NUP84P52891 726 aa7.74□□□□□ -1.17
PUP3YER094C NPY1P53164 384 aa7.74□□□□□ -1.17
PUP3YER094C CUS2P53830 285 aaPredicted RBP7.74□□□□□ -1.17
PUP3YER094C UBP2Q01476 1272 aa7.74□□□□□ -1.17
PUP3YER094C LGE1Q02796 332 aaKnown RBP7.74□□□□□ -1.17
PUP3YER094C YDR338CQ05497 695 aa7.74□□□□□ -1.17
PUP3YER094C JIP5Q06214 492 aaPredicted RBP7.74□□□□□ -1.17
PUP3YER094C HDA3Q06623 655 aa7.74□□□□□ -1.17
PUP3YER094C YOL019WQ08157 551 aa7.74□□□□□ -1.17
PUP3YER094C SMF3Q12078 473 aaPredicted RBP7.74□□□□□ -1.17
PUP3YER094C SUC2P00724 532 aa7.73□□□□□ -1.17
PUP3YER094C VAN1P23642 535 aa7.73□□□□□ -1.17
PUP3YER094C YKL100CP34248 587 aa7.73□□□□□ -1.17
PUP3YER094C CTP1P38152 299 aa7.73□□□□□ -1.17
PUP3YER094C TAE1P38340 232 aa7.73□□□□□ -1.17
PUP3YER094C RIM11P38615 370 aa7.73□□□□□ -1.17
PUP3YER094C YHR078WP38799 552 aa7.73□□□□□ -1.17
PUP3YER094C SET2P46995 733 aaKnown RBP7.73□□□□□ -1.17
PUP3YER094C NNF2P53253 936 aa7.73□□□□□ -1.17
PUP3YER094C AQR1P53943 586 aa7.73□□□□□ -1.17
PUP3YER094C SLM2P53955 656 aa7.73□□□□□ -1.17
PUP3YER094C FAP1P53971 965 aa7.73□□□□□ -1.17
PUP3YER094C YPL109CQ02981 657 aa7.73□□□□□ -1.17
PUP3YER094C CLU1Q03690 1277 aaKnown RBP7.73□□□□□ -1.17
PUP3YER094C CCE1Q03702 353 aa7.73□□□□□ -1.17
PUP3YER094C ARX1Q03862 593 aaKnown RBP7.73□□□□□ -1.17
PUP3YER094C GTB1Q04924 702 aa7.73□□□□□ -1.17
PUP3YER094C RIF2Q06208 395 aa7.73□□□□□ -1.17
PUP3YER094C RSC3Q06639 885 aa7.73□□□□□ -1.17
PUP3YER094C YPR084WQ06821 456 aa7.73□□□□□ -1.17
PUP3YER094C VAM6Q07468 1049 aa7.73□□□□□ -1.17
PUP3YER094C HBT1Q07653 1046 aaKnown RBP7.73□□□□□ -1.17
PUP3YER094C YOR012WQ12351 137 aa7.73□□□□□ -1.17
PUP3YER094C AHA1Q12449 350 aaKnown RBP7.73□□□□□ -1.17
PUP3YER094C YOL087CQ99247 1116 aa7.73□□□□□ -1.17
PUP3YER094C PWP1P21304 576 aaKnown RBP7.72□□□□□ -1.17
PUP3YER094C RAD14P28519 371 aa7.72□□□□□ -1.17
PUP3YER094C SPR1P32603 445 aa7.72□□□□□ -1.17
PUP3YER094C SPT23P35210 1082 aa7.72□□□□□ -1.17
PUP3YER094C VRP1P37370 817 aa7.72□□□□□ -1.17
PUP3YER094C CYC2P38909 366 aa7.72□□□□□ -1.17
PUP3YER094C MPT5P39016 859 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
PUP3YER094C SSN3P39073 555 aa7.72□□□□□ -1.17
PUP3YER094C SCS2P40075 244 aaKnown RBP7.72□□□□□ -1.17
PUP3YER094C YGL108CP53139 140 aa7.72□□□□□ -1.17
PUP3YER094C SHY1P53266 389 aa7.72□□□□□ -1.17
PUP3YER094C GTR2P53290 341 aa7.72□□□□□ -1.17
PUP3YER094C NOP19P53317 196 aaPredicted RBP7.72□□□□□ -1.17
PUP3YER094C BIO5P53744 561 aaKnown RBP7.72□□□□□ -1.17
PUP3YER094C TRM12Q04235 462 aa7.72□□□□□ -1.17
PUP3YER094C DIA2Q08496 732 aaPredicted RBP7.72□□□□□ -1.17
PUP3YER094C MCD1Q12158 566 aa7.72□□□□□ -1.17
PUP3YER094C ATG34Q12292 412 aa7.72□□□□□ -1.17
PUP3YER094C RRP36Q12481 300 aaPredicted RBP7.72□□□□□ -1.17
PUP3YER094C RSR1P13856 272 aa7.71□□□□□ -1.18
PUP3YER094C POL30P15873 258 aaKnown RBP7.71□□□□□ -1.18
PUP3YER094C PRP6P19735 899 aaPredicted RBP7.71□□□□□ -1.18
PUP3YER094C MLS1P30952 554 aa7.71□□□□□ -1.18
PUP3YER094C PDB1P32473 366 aaKnown RBP7.71□□□□□ -1.18
PUP3YER094C THI80P35202 319 aa7.71□□□□□ -1.18
PUP3YER094C CUE2P36075 443 aaKnown RBP7.71□□□□□ -1.18
PUP3YER094C IML3P38265 245 aa7.71□□□□□ -1.18
PUP3YER094C YHL008CP38750 627 aa7.71□□□□□ -1.18
PUP3YER094C YHR045WP38775 560 aa7.71□□□□□ -1.18
PUP3YER094C LSM5P40089 93 aaKnown RBP7.71□□□□□ -1.18
PUP3YER094C MEP1P40260 492 aa7.71□□□□□ -1.18
PUP3YER094C UTP18P40362 594 aaPredicted RBP7.71□□□□□ -1.18
PUP3YER094C YJR154WP47181 346 aa7.71□□□□□ -1.18
PUP3YER094C TIS11P47977 285 aa7.71□□□□□ -1.18
PUP3YER094C NBP35P52920 328 aa7.71□□□□□ -1.18
PUP3YER094C USE1P53146 245 aa7.71□□□□□ -1.18
PUP3YER094C TDA7P53882 636 aaPredicted RBP7.71□□□□□ -1.18
PUP3YER094C YNL010WP53981 241 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms