RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC1	YDR164C	PTC6	P25646	442 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	FRD1	P32614	470 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	OCT1	P35999	772 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	RMA1	P36001	430 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	SDS22	P36047	338 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	RRN3	P36070	627 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	MUD2	P36084	527 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	PCH2	P38126	564 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	IFA38	P38286	347 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	VBA2	P38358	474 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	SIP3	P38717	1229 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	YHR218W	P38899	603 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	AXL2	P38928	823 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	PES4	P39684	611 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	SSP120	P39931	234 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	NDE1	P40215	560 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	ESL1	P40456	1118 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	DPH1	P40487	425 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	RPN11	P43588	306 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	IDS2	P46958	469 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	UPF3	P48412	387 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	PEF1	P53238	335 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	YNL234W	P53857	426 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	YNL050C	P53952	270 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	RRB1	Q04225	511 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	MRD1	Q06106	887 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	SMD2	Q06217	110 aa	Known RBP	0.86	□□□□□ -2.27
SEC1	YDR164C	OPY2	Q06810	360 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	TLG2	Q08144	397 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	MCH4	Q08268	501 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	TRM8	Q12009	286 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	SLM3	Q12093	417 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	YLR112W	Q12130	139 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	MED1	Q12321	566 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	SFI1	Q12369	946 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	VPS5	Q92331	675 aa		0.86	□□□□□ -2.27
SEC1	YDR164C	PSK1	P31374	1356 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	RAD50	P12753	1312 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	SSK22	P25390	1331 aa	Predicted RBP	0.85	□□□□□ -2.27
SEC1	YDR164C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.85	□□□□□ -2.27
SEC1	YDR164C	GPA1	P08539	472 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	POL3	P15436	1097 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	AAC3	P18238	307 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	KGD2	P19262	463 aa	Predicted RBP	0.85	□□□□□ -2.27
SEC1	YDR164C	VPS1	P21576	704 aa	Known RBP	0.85	□□□□□ -2.27
SEC1	YDR164C	UBC1	P21734	215 aa	Known RBP	0.85	□□□□□ -2.27
SEC1	YDR164C	RER1	P25560	188 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	PSO2	P30620	661 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	XRS2	P33301	854 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	PRX1	P34227	261 aa	Known RBP	0.85	□□□□□ -2.27
SEC1	YDR164C	RPC25	P35718	212 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	MRPL10	P36520	322 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	RIM2	P38127	377 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	AVT5	P38176	459 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	YLF2	P38746	405 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	VPS8	P39702	1274 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	ASG1	P40467	964 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	SMK1	P41808	388 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	LYS4	P49367	693 aa	Predicted RBP	0.85	□□□□□ -2.27
SEC1	YDR164C	ESF2	P53743	316 aa	Known RBP	0.85	□□□□□ -2.27
SEC1	YDR164C	ACS1	Q01574	713 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	MRPL13	Q02204	264 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	YMR018W	Q04364	514 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	TAP42	Q04372	366 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	RBA50	Q04418	439 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	INM2	Q05533	292 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	VID22	Q05934	901 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	YLH47	Q06493	454 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	IMH1	Q06704	911 aa	Known RBP	0.85	□□□□□ -2.27
SEC1	YDR164C	YDL242W	Q07746	117 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	SDH5	Q08230	162 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	YOL075C	Q08234	1294 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	LEA1	Q08963	238 aa	Predicted RBP	0.85	□□□□□ -2.27
SEC1	YDR164C	DAP1	Q12091	152 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	NOP58	Q12499	511 aa	Known RBP	0.85	□□□□□ -2.27
SEC1	YDR164C	RTP1	Q12751	981 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	MET5	P47169	1442 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	YRF1-4	O13559	1382 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	AUS1	Q08409	1394 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	TY2B-LR1	P0C2J3	1770 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	TY2B-F	P0CX63	1770 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	TY2B-GR2	P0CX64	1770 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	TY2B-C	P25384	1770 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	TY2B-DR2	Q03494	1770 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	TY1B-DR1	Q03855	1755 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	TY2B-DR3	Q07791	1770 aa	Known RBP	0.85	□□□□□ -2.27
SEC1	YDR164C	TY2B-OR1	Q12113	1770 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	TY2B-DR1	Q12472	1770 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	TY2B-OR2	Q12501	1770 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	ULS1	Q08562	1619 aa		0.85	□□□□□ -2.27
SEC1	YDR164C	FOB1	O13329	566 aa		0.84	□□□□□ -2.27
SEC1	YDR164C	INH1	P01097	85 aa		0.84	□□□□□ -2.27
SEC1	YDR164C	CDC37	P06101	506 aa	Known RBP	0.84	□□□□□ -2.27
SEC1	YDR164C	CDC31	P06704	161 aa	Known RBP	0.84	□□□□□ -2.27
SEC1	YDR164C	ADE3	P07245	946 aa	Known RBP	0.84	□□□□□ -2.27
SEC1	YDR164C	RPS19A	P07280	144 aa	Known RBP	0.84	□□□□□ -2.27
SEC1	YDR164C	RPS19B	P07281	144 aa	Predicted RBP	0.84	□□□□□ -2.27
SEC1	YDR164C	NUC1	P08466	329 aa		0.84	□□□□□ -2.27
SEC1	YDR164C	RNR2	P09938	399 aa	Known RBP	0.84	□□□□□ -2.27
SEC1	YDR164C	MET8	P15807	274 aa		0.84	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 33.8 ms