RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	UME6	P39001	836 aa		4.81	□□□□□ -1.64
RPC53	YDL150W	TIF4631	P39935	952 aa	Known RBP	4.81	□□□□□ -1.64
RPC53	YDL150W	KAP123	P40069	1113 aa	Known RBP	4.81	□□□□□ -1.64
RPC53	YDL150W	CSM2	P40465	213 aa		4.81	□□□□□ -1.64
RPC53	YDL150W	PCI8	P40512	444 aa		4.81	□□□□□ -1.64
RPC53	YDL150W	MNT3	P40549	630 aa		4.81	□□□□□ -1.64
RPC53	YDL150W	EPL1	P43572	832 aa		4.81	□□□□□ -1.64
RPC53	YDL150W	ZAP1	P47043	880 aa		4.81	□□□□□ -1.64
RPC53	YDL150W	NPA3	P47122	385 aa		4.81	□□□□□ -1.64
RPC53	YDL150W	CTF18	P49956	741 aa		4.81	□□□□□ -1.64
RPC53	YDL150W	YNL092W	P53934	400 aa		4.81	□□□□□ -1.64
RPC53	YDL150W	GTB1	Q04924	702 aa		4.81	□□□□□ -1.64
RPC53	YDL150W	HRD3	Q05787	833 aa		4.81	□□□□□ -1.64
RPC53	YDL150W	RPL19A	P0CX82	189 aa	Known RBP	4.8	□□□□□ -1.64
RPC53	YDL150W	RPL19B	P0CX83	189 aa	Predicted RBP	4.8	□□□□□ -1.64
RPC53	YDL150W	MATALPHA2	P0CY08	210 aa		4.8	□□□□□ -1.64
RPC53	YDL150W	HMLALPHA2	P0CY09	210 aa		4.8	□□□□□ -1.64
RPC53	YDL150W	MAK31	P23059	88 aa		4.8	□□□□□ -1.64
RPC53	YDL150W	CHS3	P29465	1165 aa		4.8	□□□□□ -1.64
RPC53	YDL150W	ASK1	P35734	292 aa		4.8	□□□□□ -1.64
RPC53	YDL150W	ARO9	P38840	513 aa	Predicted RBP	4.8	□□□□□ -1.64
RPC53	YDL150W	MTG2	P38860	518 aa		4.8	□□□□□ -1.64
RPC53	YDL150W	MTG1	Q03151	367 aa	Predicted RBP	4.8	□□□□□ -1.64
RPC53	YDL150W	YML037C	Q03703	340 aa		4.8	□□□□□ -1.64
RPC53	YDL150W	ATG23	Q06671	453 aa		4.8	□□□□□ -1.64
RPC53	YDL150W	OPY2	Q06810	360 aa		4.8	□□□□□ -1.64
RPC53	YDL150W	VAM6	Q07468	1049 aa		4.8	□□□□□ -1.64
RPC53	YDL150W	YDL242W	Q07746	117 aa		4.8	□□□□□ -1.64
RPC53	YDL150W	SPO16	P17122	198 aa		4.79	□□□□□ -1.64
RPC53	YDL150W	AMD2	P22580	549 aa		4.79	□□□□□ -1.64
RPC53	YDL150W	URE2	P23202	354 aa	Known RBP	4.79	□□□□□ -1.64
RPC53	YDL150W	SIP1	P32578	815 aa		4.79	□□□□□ -1.64
RPC53	YDL150W	GDA1	P32621	518 aa		4.79	□□□□□ -1.64
RPC53	YDL150W	RPF2	P36160	344 aa	Known RBP	4.79	□□□□□ -1.64
RPC53	YDL150W	NOC2	P39744	710 aa	Known RBP	4.79	□□□□□ -1.64
RPC53	YDL150W	YNL058C	P53947	316 aa		4.79	□□□□□ -1.64
RPC53	YDL150W	AAT1	Q01802	451 aa		4.79	□□□□□ -1.64
RPC53	YDL150W	RPT6	Q01939	405 aa	Known RBP	4.79	□□□□□ -1.64
RPC53	YDL150W	MYO5	Q04439	1219 aa	Known RBP	4.79	□□□□□ -1.64
RPC53	YDL150W	SKG3	Q06315	1026 aa		4.79	□□□□□ -1.64
RPC53	YDL150W	PSK2	Q08217	1101 aa		4.79	□□□□□ -1.64
RPC53	YDL150W	YPL191C	Q08930	360 aa		4.79	□□□□□ -1.64
RPC53	YDL150W	LCB4	Q12246	624 aa		4.79	□□□□□ -1.64
RPC53	YDL150W	CRC1	Q12289	327 aa		4.79	□□□□□ -1.64
RPC53	YDL150W	AHA1	Q12449	350 aa	Known RBP	4.79	□□□□□ -1.64
RPC53	YDL150W	YOR111W	Q99210	232 aa		4.79	□□□□□ -1.64
RPC53	YDL150W	MOT1	P32333	1867 aa		4.78	□□□□□ -1.64
RPC53	YDL150W	TPK1	P06244	397 aa		4.78	□□□□□ -1.64
RPC53	YDL150W	SAM2	P19358	384 aa	Known RBP	4.78	□□□□□ -1.64
RPC53	YDL150W	RER1	P25560	188 aa		4.78	□□□□□ -1.64
RPC53	YDL150W	URK1	P27515	501 aa		4.78	□□□□□ -1.64
RPC53	YDL150W	SLC1	P33333	303 aa		4.78	□□□□□ -1.64
RPC53	YDL150W	TEF4	P36008	412 aa	Known RBP	4.78	□□□□□ -1.64
RPC53	YDL150W	IFA38	P38286	347 aa		4.78	□□□□□ -1.64
RPC53	YDL150W	VPS45	P38932	577 aa		4.78	□□□□□ -1.64
RPC53	YDL150W	YIL161W	P40449	235 aa	Known RBP	4.78	□□□□□ -1.64
RPC53	YDL150W	DJP1	P40564	432 aa		4.78	□□□□□ -1.64
RPC53	YDL150W	CIR1	P42940	261 aa		4.78	□□□□□ -1.64
RPC53	YDL150W	TAM41	P53230	385 aa		4.78	□□□□□ -1.64
RPC53	YDL150W	VID22	Q05934	901 aa		4.78	□□□□□ -1.64
RPC53	YDL150W	NKP1	Q12493	238 aa		4.78	□□□□□ -1.64
RPC53	YDL150W	YDR524C-B	Q3E6R4	66 aa		4.78	□□□□□ -1.64
RPC53	YDL150W	PNO1	Q99216	274 aa	Known RBP	4.78	□□□□□ -1.64
RPC53	YDL150W	LRE1	P25579	583 aa	Known RBP	4.77	□□□□□ -1.65
RPC53	YDL150W	UTR4	P32626	227 aa		4.77	□□□□□ -1.65
RPC53	YDL150W	PRX1	P34227	261 aa	Known RBP	4.77	□□□□□ -1.65
RPC53	YDL150W	BMH2	P34730	273 aa	Known RBP	4.77	□□□□□ -1.65
RPC53	YDL150W	RRN3	P36070	627 aa		4.77	□□□□□ -1.65
RPC53	YDL150W	PES4	P39684	611 aa		4.77	□□□□□ -1.65
RPC53	YDL150W	JHD1	P40034	492 aa		4.77	□□□□□ -1.65
RPC53	YDL150W	SCW4	P53334	386 aa	Known RBP	4.77	□□□□□ -1.65
RPC53	YDL150W	CSL4	P53859	292 aa	Predicted RBP	4.77	□□□□□ -1.65
RPC53	YDL150W	EAF7	P53911	425 aa	Known RBP	4.77	□□□□□ -1.65
RPC53	YDL150W	YML119W	Q03208	357 aa		4.77	□□□□□ -1.65
RPC53	YDL150W	RAD33	Q04231	177 aa		4.77	□□□□□ -1.65
RPC53	YDL150W	PLM2	Q04383	521 aa		4.77	□□□□□ -1.65
RPC53	YDL150W	NEW1	Q08972	1196 aa	Known RBP	4.77	□□□□□ -1.65
RPC53	YDL150W	LSP1	Q12230	341 aa	Known RBP	4.77	□□□□□ -1.65
RPC53	YDL150W	ATP2	P00830	511 aa	Known RBP	4.76	□□□□□ -1.65
RPC53	YDL150W	HSP82	P02829	709 aa	Known RBP	4.76	□□□□□ -1.65
RPC53	YDL150W	SNF1	P06782	633 aa	Known RBP	4.76	□□□□□ -1.65
RPC53	YDL150W	SRP54	P20424	541 aa	Known RBP	4.76	□□□□□ -1.65
RPC53	YDL150W	IME2	P32581	645 aa		4.76	□□□□□ -1.65
RPC53	YDL150W	RXT2	P38255	430 aa		4.76	□□□□□ -1.65
RPC53	YDL150W	BUD16	P39988	312 aa		4.76	□□□□□ -1.65
RPC53	YDL150W	IST3	P40565	148 aa	Predicted RBP	4.76	□□□□□ -1.65
RPC53	YDL150W	MEP2	P41948	499 aa		4.76	□□□□□ -1.65
RPC53	YDL150W	ASE1	P50275	885 aa		4.76	□□□□□ -1.65
RPC53	YDL150W	SOL4	P53315	255 aa		4.76	□□□□□ -1.65
RPC53	YDL150W	MDM1	Q01846	1127 aa		4.76	□□□□□ -1.65
RPC53	YDL150W	YMR018W	Q04364	514 aa		4.76	□□□□□ -1.65
RPC53	YDL150W	YDR341C	Q05506	607 aa	Known RBP	4.76	□□□□□ -1.65
RPC53	YDL150W	SUE1	Q06524	206 aa		4.76	□□□□□ -1.65
RPC53	YDL150W	YDL121C	Q07541	149 aa		4.76	□□□□□ -1.65
RPC53	YDL150W	COX17	Q12287	69 aa		4.76	□□□□□ -1.65
RPC53	YDL150W	TOR2	P32600	2474 aa	Known RBP	4.75	□□□□□ -1.65
RPC53	YDL150W	YPT1	P01123	206 aa	Known RBP	4.75	□□□□□ -1.65
RPC53	YDL150W	YER190C-B	P0CX94	160 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	YEL077W-A	P0CX95	160 aa		4.75	□□□□□ -1.65
RPC53	YDL150W	YGR296C-B	P0CX96	160 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms