RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C SIW14P53965 281 aa5.76□□□□□ -1.49
MDH3YDL078C TDA9Q04545 1251 aa5.76□□□□□ -1.49
MDH3YDL078C TSR2Q06672 205 aaKnown RBP5.76□□□□□ -1.49
MDH3YDL078C MSH5Q12175 901 aa5.76□□□□□ -1.49
MDH3YDL078C HOS1Q12214 470 aa5.76□□□□□ -1.49
MDH3YDL078C SCM3Q12334 223 aa5.76□□□□□ -1.49
MDH3YDL078C YRM1Q12340 786 aa5.76□□□□□ -1.49
MDH3YDL078C GPR1Q12361 961 aa5.76□□□□□ -1.49
MDH3YDL078C HTZ1Q12692 134 aaKnown RBP5.76□□□□□ -1.49
MDH3YDL078C Q0182Q9ZZW1 134 aa5.76□□□□□ -1.49
MDH3YDL078C NMT1P14743 455 aa5.75□□□□□ -1.49
MDH3YDL078C ACO1P19414 778 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
MDH3YDL078C RPB4P20433 221 aaPredicted RBP5.75□□□□□ -1.49
MDH3YDL078C RBK1P25332 333 aa5.75□□□□□ -1.49
MDH3YDL078C DCC1P25559 380 aa5.75□□□□□ -1.49
MDH3YDL078C EMC1P25574 760 aa5.75□□□□□ -1.49
MDH3YDL078C NDI1P32340 513 aa5.75□□□□□ -1.49
MDH3YDL078C HEM12P32347 362 aaPredicted RBP5.75□□□□□ -1.49
MDH3YDL078C AEP1P32493 518 aa5.75□□□□□ -1.49
MDH3YDL078C UTR2P32623 467 aa5.75□□□□□ -1.49
MDH3YDL078C KES1P35844 434 aaKnown RBP5.75□□□□□ -1.49
MDH3YDL078C FZO1P38297 855 aa5.75□□□□□ -1.49
MDH3YDL078C MSG5P38590 489 aa5.75□□□□□ -1.49
MDH3YDL078C YHR020WP38708 688 aaKnown RBP5.75□□□□□ -1.49
MDH3YDL078C WSC4P38739 605 aa5.75□□□□□ -1.49
MDH3YDL078C TDA11P38854 504 aa5.75□□□□□ -1.49
MDH3YDL078C PFS1P38872 237 aa5.75□□□□□ -1.49
MDH3YDL078C FAA3P39002 694 aa5.75□□□□□ -1.49
MDH3YDL078C MRX1P40050 688 aa5.75□□□□□ -1.49
MDH3YDL078C TIF34P40217 347 aaKnown RBP5.75□□□□□ -1.49
MDH3YDL078C YJL070CP40361 888 aa5.75□□□□□ -1.49
MDH3YDL078C AIR1P40507 360 aaKnown RBP5.75□□□□□ -1.49
MDH3YDL078C INA22P40576 216 aa5.75□□□□□ -1.49
MDH3YDL078C RIM8P53179 542 aa5.75□□□□□ -1.49
MDH3YDL078C DCP2P53550 970 aaKnown RBP5.75□□□□□ -1.49
MDH3YDL078C YNL143CP53908 130 aa5.75□□□□□ -1.49
MDH3YDL078C COG6P53959 839 aa5.75□□□□□ -1.49
MDH3YDL078C YPL113CQ02961 396 aa5.75□□□□□ -1.49
MDH3YDL078C DML1Q03652 475 aa5.75□□□□□ -1.49
MDH3YDL078C YDR131CQ03899 556 aa5.75□□□□□ -1.49
MDH3YDL078C RPC11Q04307 110 aaPredicted RBP5.75□□□□□ -1.49
MDH3YDL078C GSF2Q04697 403 aaKnown RBP5.75□□□□□ -1.49
MDH3YDL078C ATG23Q06671 453 aa5.75□□□□□ -1.49
MDH3YDL078C RPN8Q08723 338 aaKnown RBP5.75□□□□□ -1.49
MDH3YDL078C YIG1Q08956 461 aa5.75□□□□□ -1.49
MDH3YDL078C VIK1Q12045 647 aa5.75□□□□□ -1.49
MDH3YDL078C PIN2Q12057 282 aa5.75□□□□□ -1.49
MDH3YDL078C GNT1Q12096 491 aa5.75□□□□□ -1.49
MDH3YDL078C SUC2P00724 532 aa5.74□□□□□ -1.49
MDH3YDL078C HIS3P06633 220 aa5.74□□□□□ -1.49
MDH3YDL078C YKR104WP0CE69 306 aa5.74□□□□□ -1.49
MDH3YDL078C CDC24P11433 854 aaPredicted RBP5.74□□□□□ -1.49
MDH3YDL078C RSR1P13856 272 aa5.74□□□□□ -1.49
MDH3YDL078C YSP3P25036 478 aa5.74□□□□□ -1.49
MDH3YDL078C YCR016WP25617 290 aaKnown RBP5.74□□□□□ -1.49
MDH3YDL078C PMI40P29952 429 aaKnown RBP5.74□□□□□ -1.49
MDH3YDL078C SCD5P34758 872 aa5.74□□□□□ -1.49
MDH3YDL078C CTF13P35203 478 aa5.74□□□□□ -1.49
MDH3YDL078C YBP1P38315 674 aa5.74□□□□□ -1.49
MDH3YDL078C POP4P38336 279 aa5.74□□□□□ -1.49
MDH3YDL078C SRP72P38688 640 aaKnown RBP5.74□□□□□ -1.49
MDH3YDL078C ERP5P38819 212 aa5.74□□□□□ -1.49
MDH3YDL078C SMF1P38925 575 aa5.74□□□□□ -1.49
MDH3YDL078C STN1P38960 494 aa5.74□□□□□ -1.49
MDH3YDL078C RPH1P39956 796 aa5.74□□□□□ -1.49
MDH3YDL078C SCC4P40090 624 aa5.74□□□□□ -1.49
MDH3YDL078C RGI2P40188 164 aa5.74□□□□□ -1.49
MDH3YDL078C GCD14P46959 383 aaPredicted RBP5.74□□□□□ -1.49
MDH3YDL078C SNX4P47057 423 aa5.74□□□□□ -1.49
MDH3YDL078C MNN10P50108 393 aaKnown RBP5.74□□□□□ -1.49
MDH3YDL078C GND2P53319 492 aa5.74□□□□□ -1.49
MDH3YDL078C CPR6P53691 371 aaKnown RBP5.74□□□□□ -1.49
MDH3YDL078C VAC7P53950 1165 aa5.74□□□□□ -1.49
MDH3YDL078C EFM6P53970 246 aa5.74□□□□□ -1.49
MDH3YDL078C REX2P54964 269 aaKnown RBP5.74□□□□□ -1.49
MDH3YDL078C HDA3Q06623 655 aa5.74□□□□□ -1.49
MDH3YDL078C ATG10Q07879 167 aa5.74□□□□□ -1.49
MDH3YDL078C NOP12Q08208 459 aaKnown RBP5.74□□□□□ -1.49
MDH3YDL078C YOR223WQ12015 292 aa5.74□□□□□ -1.49
MDH3YDL078C NAG1Q8TGN9 163 aa5.74□□□□□ -1.49
MDH3YDL078C IMA3P0CW40 589 aa5.73□□□□□ -1.49
MDH3YDL078C IMA4P0CW41 589 aa5.73□□□□□ -1.49
MDH3YDL078C ERR1P0CX10 437 aa5.73□□□□□ -1.49
MDH3YDL078C ERR2P0CX11 437 aa5.73□□□□□ -1.49
MDH3YDL078C ARG1P22768 420 aa5.73□□□□□ -1.49
MDH3YDL078C VAN1P23642 535 aa5.73□□□□□ -1.49
MDH3YDL078C MEF1P25039 761 aa5.73□□□□□ -1.49
MDH3YDL078C TSR4P25040 408 aa5.73□□□□□ -1.49
MDH3YDL078C GBP2P25555 427 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
MDH3YDL078C GAR1P28007 205 aaKnown RBP5.73□□□□□ -1.49
MDH3YDL078C HEM3P28789 327 aa5.73□□□□□ -1.49
MDH3YDL078C CNS1P33313 385 aa5.73□□□□□ -1.49
MDH3YDL078C YKL063CP35725 167 aa5.73□□□□□ -1.49
MDH3YDL078C IFA38P38286 347 aa5.73□□□□□ -1.49
MDH3YDL078C VHC1P38329 1120 aa5.73□□□□□ -1.49
MDH3YDL078C TAE1P38340 232 aa5.73□□□□□ -1.49
MDH3YDL078C RRP3P38712 501 aaKnown RBP5.73□□□□□ -1.49
MDH3YDL078C SMF2P38778 549 aa5.73□□□□□ -1.49
MDH3YDL078C FCY21P40039 528 aa5.73□□□□□ -1.49
MDH3YDL078C ERR3P42222 437 aa5.73□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms