RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C SIL1Q08199 421 aa1.08□□□□□ -2.24
VAM6YDL077C AVO1Q08236 1176 aa1.08□□□□□ -2.24
VAM6YDL077C SKI7Q08491 747 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C CSM4Q08955 156 aa1.08□□□□□ -2.24
VAM6YDL077C FEX2Q08991 375 aa1.08□□□□□ -2.24
VAM6YDL077C DIN7Q12086 430 aa1.08□□□□□ -2.24
VAM6YDL077C FAL1Q12099 399 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C YDL109CQ12103 647 aa1.08□□□□□ -2.24
VAM6YDL077C APC9Q12107 265 aa1.08□□□□□ -2.24
VAM6YDL077C ARP7Q12406 477 aa1.08□□□□□ -2.24
VAM6YDL077C AFI1Q99222 893 aa1.08□□□□□ -2.24
VAM6YDL077C YOR019WQ99248 730 aa1.08□□□□□ -2.24
VAM6YDL077C MED11Q99278 115 aa1.08□□□□□ -2.24
VAM6YDL077C TRP2P00899 507 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C TUF1P02992 437 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C GCN4P03069 281 aa1.08□□□□□ -2.24
VAM6YDL077C LEU2P04173 364 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C CDC7P06243 507 aa1.08□□□□□ -2.24
VAM6YDL077C YGL041W-AP0C5N3 154 aa1.08□□□□□ -2.24
VAM6YDL077C MPH2P0CD99 609 aa1.08□□□□□ -2.24
VAM6YDL077C NFT1P0CE68 1218 aa1.08□□□□□ -2.24
VAM6YDL077C PHO8P11491 566 aa1.08□□□□□ -2.24
VAM6YDL077C PUT4P15380 627 aa1.08□□□□□ -2.24
VAM6YDL077C APA1P16550 321 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C HEM15P16622 393 aa1.08□□□□□ -2.24
VAM6YDL077C ALG1P16661 449 aa1.08□□□□□ -2.24
VAM6YDL077C KGD2P19262 463 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C GRR1P24814 1151 aa1.08□□□□□ -2.24
VAM6YDL077C CNB1P25296 175 aa1.08□□□□□ -2.24
VAM6YDL077C RNA15P25299 296 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C YCL049CP25577 312 aa1.08□□□□□ -2.24
VAM6YDL077C CSM1P25651 190 aa1.08□□□□□ -2.24
VAM6YDL077C NAM9P27929 486 aa1.08□□□□□ -2.24
VAM6YDL077C FUN30P31380 1131 aa1.08□□□□□ -2.24
VAM6YDL077C DPH2P32461 534 aa1.08□□□□□ -2.24
VAM6YDL077C PAH1P32567 862 aa1.08□□□□□ -2.24
VAM6YDL077C SHP1P34223 423 aa1.08□□□□□ -2.24
VAM6YDL077C APL2P36000 726 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C MRPL3P36516 390 aa1.08□□□□□ -2.24
VAM6YDL077C MRPL15P36523 253 aa1.08□□□□□ -2.24
VAM6YDL077C YBR056WP38081 501 aa1.08□□□□□ -2.24
VAM6YDL077C RDH54P38086 958 aa1.08□□□□□ -2.24
VAM6YDL077C CTP1P38152 299 aa1.08□□□□□ -2.24
VAM6YDL077C MAL31P38156 614 aa1.08□□□□□ -2.24
VAM6YDL077C RRN10P38204 145 aa1.08□□□□□ -2.24
VAM6YDL077C KAP104P38217 918 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C TDP1P38319 544 aa1.08□□□□□ -2.24
VAM6YDL077C YBR238CP38330 731 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C COS8P38723 381 aa1.08□□□□□ -2.24
VAM6YDL077C SPC97P38863 823 aa1.08□□□□□ -2.24
VAM6YDL077C MPT5P39016 859 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24not detected
VAM6YDL077C CCT3P39077 534 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C MNN9P39107 395 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C YER184CP39961 794 aa1.08□□□□□ -2.24
VAM6YDL077C YAT2P40017 923 aa1.08□□□□□ -2.24
VAM6YDL077C GIP2P40036 548 aa1.08□□□□□ -2.24
VAM6YDL077C PSY2P40164 858 aa1.08□□□□□ -2.24
VAM6YDL077C MMF1P40185 145 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C NTA1P40354 457 aa1.08□□□□□ -2.24
VAM6YDL077C NUP82P40368 713 aa1.08□□□□□ -2.24
VAM6YDL077C SLM1P40485 686 aa1.08□□□□□ -2.24
VAM6YDL077C YJL045WP47052 634 aa1.08□□□□□ -2.24
VAM6YDL077C STB4P50104 949 aa1.08□□□□□ -2.24
VAM6YDL077C TAF4P50105 388 aa1.08□□□□□ -2.24
VAM6YDL077C FMS1P50264 508 aa1.08□□□□□ -2.24
VAM6YDL077C ASE1P50275 885 aa1.08□□□□□ -2.24
VAM6YDL077C DSD1P53095 428 aa1.08□□□□□ -2.24
VAM6YDL077C YGL036WP53185 909 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C ART5P53244 586 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C ZPR1P53303 486 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C BRE5P53741 515 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C YNR061CP53747 219 aa1.08□□□□□ -2.24
VAM6YDL077C YAF9P53930 226 aa1.08□□□□□ -2.24
VAM6YDL077C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24not detected
VAM6YDL077C RPT6Q01939 405 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C RSC4Q02206 625 aa1.08□□□□□ -2.24
VAM6YDL077C NUP116Q02630 1113 aa1.08□□□□□ -2.24
VAM6YDL077C RMI1Q02685 241 aa1.08□□□□□ -2.24
VAM6YDL077C REC102Q02721 264 aa1.08□□□□□ -2.24
VAM6YDL077C CWC27Q02770 301 aa1.08□□□□□ -2.24
VAM6YDL077C NOG1Q02892 647 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C YDR541CQ03049 344 aa1.08□□□□□ -2.24
VAM6YDL077C RMT2Q03305 412 aa1.08□□□□□ -2.24
VAM6YDL077C SKY1Q03656 742 aa1.08□□□□□ -2.24
VAM6YDL077C RAD33Q04231 177 aa1.08□□□□□ -2.24
VAM6YDL077C SEG1Q04279 960 aa1.08□□□□□ -2.24
VAM6YDL077C KAR5Q04746 504 aa1.08□□□□□ -2.24
VAM6YDL077C TAF9Q05027 157 aa1.08□□□□□ -2.24
VAM6YDL077C BOP2Q06150 570 aa1.08□□□□□ -2.24
VAM6YDL077C TSR2Q06672 205 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C YLR413WQ06689 675 aa1.08□□□□□ -2.24
VAM6YDL077C CSR1Q06705 408 aaKnown RBP1.08□□□□□ -2.24
VAM6YDL077C GRS2Q06817 618 aa1.08□□□□□ -2.24
VAM6YDL077C YLR001CQ07895 862 aa1.08□□□□□ -2.24
VAM6YDL077C ZEO1Q08245 113 aa1.08□□□□□ -2.24
VAM6YDL077C ESA1Q08649 445 aa1.08□□□□□ -2.24
VAM6YDL077C TMA16Q08687 178 aa1.08□□□□□ -2.24
VAM6YDL077C GPM2Q12008 311 aa1.08□□□□□ -2.24
VAM6YDL077C SMF3Q12078 473 aaPredicted RBP1.08□□□□□ -2.24
VAM6YDL077C MLH3Q12083 715 aa1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 108.2 ms