RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W ARP4P80428 489 aa5.79□□□□□ -1.48
SHP1YBL058W SLU7Q02775 382 aaKnown RBP5.79□□□□□ -1.48
SHP1YBL058W TRS23Q03784 219 aa5.79□□□□□ -1.48
SHP1YBL058W YLR030WQ07967 263 aa5.79□□□□□ -1.48
SHP1YBL058W WTM2Q12206 467 aa5.79□□□□□ -1.48
SHP1YBL058W CMR1Q12510 522 aaKnown RBP5.79□□□□□ -1.48
SHP1YBL058W SPS1P08458 490 aa5.78□□□□□ -1.48
SHP1YBL058W GBP2P25555 427 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
SHP1YBL058W HEM12P32347 362 aaPredicted RBP5.78□□□□□ -1.48
SHP1YBL058W HXT1P32465 570 aa5.78□□□□□ -1.48
SHP1YBL058W LYP1P32487 611 aa5.78□□□□□ -1.48
SHP1YBL058W PET309P32522 965 aaPredicted RBP5.78□□□□□ -1.48
SHP1YBL058W SRP101P32916 621 aa5.78□□□□□ -1.48
SHP1YBL058W SKN1P33336 771 aa5.78□□□□□ -1.48
SHP1YBL058W PRP18P33411 251 aaPredicted RBP5.78□□□□□ -1.48
SHP1YBL058W EMC3P36039 253 aa5.78□□□□□ -1.48
SHP1YBL058W RCK2P38623 610 aa5.78□□□□□ -1.48
SHP1YBL058W YHR033WP38690 423 aa5.78□□□□□ -1.48
SHP1YBL058W TCD1P38756 429 aa5.78□□□□□ -1.48
SHP1YBL058W MTG2P38860 518 aa5.78□□□□□ -1.48
SHP1YBL058W AIR1P40507 360 aaKnown RBP5.78□□□□□ -1.48
SHP1YBL058W GTS1P40956 396 aa5.78□□□□□ -1.48
SHP1YBL058W IME4P41833 600 aa5.78□□□□□ -1.48
SHP1YBL058W PMT3P47190 753 aa5.78□□□□□ -1.48
SHP1YBL058W ASK10P48361 1146 aa5.78□□□□□ -1.48
SHP1YBL058W ARE2P53629 642 aaKnown RBP5.78□□□□□ -1.48
SHP1YBL058W ROT1Q03691 256 aa5.78□□□□□ -1.48
SHP1YBL058W BLS1Q06071 122 aa5.78□□□□□ -1.48
SHP1YBL058W ADY3Q07732 790 aa5.78□□□□□ -1.48
SHP1YBL058W HSP42Q12329 375 aa5.78□□□□□ -1.48
SHP1YBL058W GTT2Q12390 233 aa5.78□□□□□ -1.48
SHP1YBL058W RRP12Q12754 1228 aaKnown RBP5.78□□□□□ -1.48
SHP1YBL058W AMD1P15274 810 aaKnown RBP5.77□□□□□ -1.49
SHP1YBL058W HOP1P20050 605 aa5.77□□□□□ -1.49
SHP1YBL058W NDI1P32340 513 aa5.77□□□□□ -1.49
SHP1YBL058W ISC10P32645 267 aa5.77□□□□□ -1.49
SHP1YBL058W MRT4P33201 236 aaKnown RBP5.77□□□□□ -1.49
SHP1YBL058W DOM34P33309 386 aa5.77□□□□□ -1.49
SHP1YBL058W SQT1P35184 431 aa5.77□□□□□ -1.49
SHP1YBL058W STB6P36085 766 aa5.77□□□□□ -1.49
SHP1YBL058W YHR182WP38870 785 aa5.77□□□□□ -1.49
SHP1YBL058W END3P39013 349 aa5.77□□□□□ -1.49
SHP1YBL058W ALG8P40351 577 aa5.77□□□□□ -1.49
SHP1YBL058W TAH11P47112 604 aa5.77□□□□□ -1.49
SHP1YBL058W BTN2P53286 410 aa5.77□□□□□ -1.49
SHP1YBL058W YPR003CP53394 754 aa5.77□□□□□ -1.49
SHP1YBL058W NOP15P53927 220 aaPredicted RBP5.77□□□□□ -1.49
SHP1YBL058W OSH6Q02201 448 aa5.77□□□□□ -1.49
SHP1YBL058W TRS31Q03337 283 aa5.77□□□□□ -1.49
SHP1YBL058W CTK1Q03957 528 aaKnown RBP5.77□□□□□ -1.49
SHP1YBL058W NUT2Q06213 157 aa5.77□□□□□ -1.49
SHP1YBL058W GRS2Q06817 618 aa5.77□□□□□ -1.49
SHP1YBL058W DIN7Q12086 430 aa5.77□□□□□ -1.49
SHP1YBL058W YOR012WQ12351 137 aa5.77□□□□□ -1.49
SHP1YBL058W HSH49Q99181 213 aaPredicted RBP5.77□□□□□ -1.49
SHP1YBL058W FUM1P08417 488 aaKnown RBP5.76□□□□□ -1.49
SHP1YBL058W ERR1P0CX10 437 aa5.76□□□□□ -1.49
SHP1YBL058W ERR2P0CX11 437 aa5.76□□□□□ -1.49
SHP1YBL058W PRI2P20457 528 aa5.76□□□□□ -1.49
SHP1YBL058W MVD1P32377 396 aaKnown RBP5.76□□□□□ -1.49
SHP1YBL058W PET112P33893 541 aa5.76□□□□□ -1.49
SHP1YBL058W NTR2P36118 322 aaPredicted RBP5.76□□□□□ -1.49
SHP1YBL058W PCH2P38126 564 aa5.76□□□□□ -1.49
SHP1YBL058W ERR3P42222 437 aa5.76□□□□□ -1.49
SHP1YBL058W RPN9Q04062 393 aaKnown RBP5.76□□□□□ -1.49
SHP1YBL058W VPS38Q05919 439 aa5.76□□□□□ -1.49
SHP1YBL058W SLD7Q08457 257 aa5.76□□□□□ -1.49
SHP1YBL058W HRK1Q08732 759 aaKnown RBP5.76□□□□□ -1.49
SHP1YBL058W HOS1Q12214 470 aa5.76□□□□□ -1.49
SHP1YBL058W AVL9Q12500 764 aa5.76□□□□□ -1.49
SHP1YBL058W RMD5Q12508 421 aa5.76□□□□□ -1.49
SHP1YBL058W HRP1Q99383 534 aaKnown RBP5.76□□□□□ -1.49
SHP1YBL058W ILS1P09436 1072 aaKnown RBP5.75□□□□□ -1.49
SHP1YBL058W RPL43AP0CX25 92 aaKnown RBP5.75□□□□□ -1.49
SHP1YBL058W RPL43BP0CX26 92 aa5.75□□□□□ -1.49
SHP1YBL058W STE6P12866 1290 aa5.75□□□□□ -1.49
SHP1YBL058W TSR4P25040 408 aa5.75□□□□□ -1.49
SHP1YBL058W GID7P25569 745 aa5.75□□□□□ -1.49
SHP1YBL058W RSC6P25632 483 aa5.75□□□□□ -1.49
SHP1YBL058W KNS1P32350 737 aaPredicted RBP5.75□□□□□ -1.49
SHP1YBL058W KES1P35844 434 aaKnown RBP5.75□□□□□ -1.49
SHP1YBL058W MAK5P38112 773 aaPredicted RBP5.75□□□□□ -1.49
SHP1YBL058W TRM7P38238 310 aaKnown RBP5.75□□□□□ -1.49
SHP1YBL058W YSW1P38280 609 aa5.75□□□□□ -1.49
SHP1YBL058W ACO2P39533 789 aa5.75□□□□□ -1.49
SHP1YBL058W MEF2P39677 819 aa5.75□□□□□ -1.49
SHP1YBL058W SEO1P39709 593 aa5.75□□□□□ -1.49
SHP1YBL058W EFM4P40516 257 aa5.75□□□□□ -1.49
SHP1YBL058W UBX6P47049 396 aa5.75□□□□□ -1.49
SHP1YBL058W CDA2Q06703 312 aa5.75□□□□□ -1.49
SHP1YBL058W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
SHP1YBL058W CYR1P08678 2026 aaKnown RBP5.75□□□□□ -1.49
SHP1YBL058W ERG20P08524 352 aaKnown RBP5.74□□□□□ -1.49
SHP1YBL058W CDC24P11433 854 aaPredicted RBP5.74□□□□□ -1.49
SHP1YBL058W IMG1P25626 169 aa5.74□□□□□ -1.49
SHP1YBL058W IME2P32581 645 aa5.74□□□□□ -1.49
SHP1YBL058W GDA1P32621 518 aa5.74□□□□□ -1.49
SHP1YBL058W CNS1P33313 385 aa5.74□□□□□ -1.49
SHP1YBL058W DEF1P35732 738 aaKnown RBP5.74□□□□□ -1.49
SHP1YBL058W FMP46P36141 133 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms