RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Gm4312K9J7E2 289 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Cdh15P33146 784 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Sec23aQ01405 765 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Tmem35bQ3U0Y2 150 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Clul1Q3ZRW6 464 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ddx3xQ62167 662 aaKnown RBP16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Kif1bpQ6ZPU9 617 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Mindy1Q76LS9 468 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ccdc38Q8CDN8 563 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Q8VDP2 222 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Farp2Q91VS8 1065 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Fsip1Q9D3V5 435 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Mss51Q9D5Z5 446 aa16.53■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 JcadQ5DTX6 1320 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Krt24A1L317 512 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Dnai2A2AC93 623 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ccdc24E9PUW8 296 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 CltaO08585 235 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Gnat2P50149 354 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Lig3P97386 1015 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 GnpatP98192 678 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Serpinb6Q60854 378 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 RgmbQ7TQ33 436 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Fnbp1Q80TY0 616 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Prl7b1Q8CGZ9 251 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Lrrc42Q8R2U7 421 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Nxnl2Q9D531 156 aa16.52■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Pram1Q6BCL1 675 aa16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Txndc16Q7TN22 820 aa16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Cracr2bQ80ZJ8 394 aa16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Eps8l2Q99K30 729 aa16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Mtfr1lQ9CWE0 289 aa16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Sept3Q9Z1S5 350 aa16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 SarsP26638 512 aaKnown RBP16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Tmtc1Q3UV71 942 aa16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Krt42Q6IFX2 452 aa16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Gnl3lQ6PGG6 577 aaKnown RBP16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 GypcQ78HU7 95 aa16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Otop3Q80UF9 577 aa16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Morc2bQ8C5W4 1022 aa16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Ebag9Q9D0V7 213 aa16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Actn2Q9JI91 894 aa16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Rpf2Q9JJ80 306 aaKnown RBP16.51■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Tmem134Q8R0J4 195 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Myo1hQ9D6A1 958 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Tnip1Q9WUU8 647 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Myh6Q02566 1938 aaKnown RBP16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Gm28919A0A087WP35 240 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Pip4k2aO70172 405 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Cops6O88545 324 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 RaraP11416 462 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Plbd2Q3TCN2 594 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Asic3Q6X1Y6 530 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Jade2Q6ZQF7 829 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 F13a1Q8BH61 732 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Cep95Q8BVV7 827 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Ildr1Q8CBR1 537 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Tmem192Q9CXT7 266 aa16.5■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 MeiocA2AG06 965 aa16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 AgtP11859 477 aa16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 PpardP35396 440 aa16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Hirip3Q8BLH7 601 aa16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Rassf2Q8BMS9 326 aa16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Q91WD4 421 aa16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 FliiQ9JJ28 1271 aa16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Psma7Q9Z2U0 248 aa16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Tiam2Q6ZPF3 1715 aa16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Gm5134E9QAB5 671 aa16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 MybP06876 636 aa16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Parp1P11103 1013 aaKnown RBP16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Plekho1Q9JIY0 408 aa16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Klra17Q9JMA4 273 aa16.49■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Sec14l1A8Y5H7 715 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 TbcaP48428 108 aaKnown RBP16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Atp6v1aP50516 617 aaKnown RBP16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Q32P12 615 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Ccdc122Q8BVN0 290 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Iws1Q8C1D8 766 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Herc3A6H6S0 1050 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Gucy1a2F8VQK3 730 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Zbtb7aO88939 569 aaKnown RBP16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Tcp1P11983 556 aaKnown RBP16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Trappc10Q3TLI0 1259 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 MycbpapQ5SUV2 932 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 EsrrbQ61539 433 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Srrm3Q80WV7 648 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 3830417A13RikQ8BQJ2 303 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Olfm5Q8BU90 496 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Exoc1Q8R3S6 894 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Atp1a1Q8VDN2 1023 aaKnown RBP16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Alg1Q921Q3 482 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Ubxn1Q922Y1 297 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Ccdc43Q9CR29 222 aaKnown RBP16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Gkap1Q9JMB0 366 aa16.48■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Ecm29Q6PDI5 1840 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Abca15E9PWH4 1668 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Akr1b10G5E895 316 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Gm4340L7N2C4 268 aa16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Rnpc3Q3UZ01 514 aaKnown RBP16.47■□□□□ 0.23
Ushbp1-201ENSMUST00000049184 Pus7lQ8CE46 702 aa16.47■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms