Protein–RNA interactions for Protein: Q3UV71

Tmtc1, Transmembrane and TPR repeat-containing protein 1, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmtc1Q3UV71 Gm25239-201ENSMUST00000174915 86 ntBASIC37,4■■■■□ 3,58
Tmtc1Q3UV71 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37,39■■■■□ 3,58
Tmtc1Q3UV71 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36,12■■■■□ 3,37
Tmtc1Q3UV71 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36,1■■■■□ 3,37
Tmtc1Q3UV71 Psd-208ENSMUST00000224556 2034 ntBASIC35■■■■□ 3,19
Tmtc1Q3UV71 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34,38■■■■□ 3,09
Tmtc1Q3UV71 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34,16■■■■□ 3,06
Tmtc1Q3UV71 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34,09■■■■□ 3,05
Tmtc1Q3UV71 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34,03■■■■□ 3,04
Tmtc1Q3UV71 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33,74■■■□□ 2,99
Tmtc1Q3UV71 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33,74■■■□□ 2,99
Tmtc1Q3UV71 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33,7■■■□□ 2,99
Tmtc1Q3UV71 Gm15042-201ENSMUST00000120212 883 ntBASIC33,65■■■□□ 2,98
Tmtc1Q3UV71 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33,5■■■□□ 2,95
Tmtc1Q3UV71 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33,46■■■□□ 2,95
Tmtc1Q3UV71 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33,42■■■□□ 2,94
Tmtc1Q3UV71 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33,38■■■□□ 2,93
Tmtc1Q3UV71 Gm15045-201ENSMUST00000117359 883 ntBASIC33,12■■■□□ 2,89
Tmtc1Q3UV71 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32,93■■■□□ 2,86
Tmtc1Q3UV71 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32,93■■■□□ 2,86
Tmtc1Q3UV71 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32,71■■■□□ 2,83
Tmtc1Q3UV71 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32,63■■■□□ 2,81
Tmtc1Q3UV71 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32,51■■■□□ 2,79
Tmtc1Q3UV71 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,49■■■□□ 2,79
Tmtc1Q3UV71 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32,41■■■□□ 2,78
Tmtc1Q3UV71 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32,37■■■□□ 2,77
Tmtc1Q3UV71 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32,32■■■□□ 2,76
Tmtc1Q3UV71 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32,31■■■□□ 2,76
Tmtc1Q3UV71 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,3■■■□□ 2,76
Tmtc1Q3UV71 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32,24■■■□□ 2,75
Tmtc1Q3UV71 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32,21■■■□□ 2,75
Tmtc1Q3UV71 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32,2■■■□□ 2,75
Tmtc1Q3UV71 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32,2■■■□□ 2,74
Tmtc1Q3UV71 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32,16■■■□□ 2,74
Tmtc1Q3UV71 Gm24109-201ENSMUST00000175489 103 ntBASIC32,01■■■□□ 2,71
Tmtc1Q3UV71 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32,01■■■□□ 2,71
Tmtc1Q3UV71 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32■■■□□ 2,71
Tmtc1Q3UV71 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31,95■■■□□ 2,71
Tmtc1Q3UV71 Gm10524-201ENSMUST00000181931 1893 ntBASIC31,72■■■□□ 2,67
Tmtc1Q3UV71 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31,69■■■□□ 2,66
Tmtc1Q3UV71 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31,64■■■□□ 2,66
Tmtc1Q3UV71 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31,63■■■□□ 2,65
Tmtc1Q3UV71 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31,51■■■□□ 2,63
Tmtc1Q3UV71 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31,45■■■□□ 2,63
Tmtc1Q3UV71 Gm23366-201ENSMUST00000175022 89 ntBASIC31,36■■■□□ 2,61
Tmtc1Q3UV71 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Tmtc1Q3UV71 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31,28■■■□□ 2,6
Tmtc1Q3UV71 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31,22■■■□□ 2,59
Tmtc1Q3UV71 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31,17■■■□□ 2,58
Tmtc1Q3UV71 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31,16■■■□□ 2,58
Tmtc1Q3UV71 Gm42596-201ENSMUST00000196305 1958 ntBASIC31,12■■■□□ 2,57
Tmtc1Q3UV71 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31,09■■■□□ 2,57
Tmtc1Q3UV71 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31,01■■■□□ 2,56
Tmtc1Q3UV71 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30,95■■■□□ 2,55
Tmtc1Q3UV71 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30,94■■■□□ 2,54
Tmtc1Q3UV71 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30,92■■■□□ 2,54
Tmtc1Q3UV71 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30,9■■■□□ 2,54
Tmtc1Q3UV71 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30,89■■■□□ 2,54
Tmtc1Q3UV71 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30,88■■■□□ 2,53
Tmtc1Q3UV71 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC30,88■■■□□ 2,53
Tmtc1Q3UV71 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30,86■■■□□ 2,53
Tmtc1Q3UV71 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30,86■■■□□ 2,53
Tmtc1Q3UV71 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30,82■■■□□ 2,52
Tmtc1Q3UV71 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC30,8■■■□□ 2,52
Tmtc1Q3UV71 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,52
Tmtc1Q3UV71 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30,69■■■□□ 2,5
Tmtc1Q3UV71 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30,68■■■□□ 2,5
Tmtc1Q3UV71 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30,62■■■□□ 2,49
Tmtc1Q3UV71 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30,61■■■□□ 2,49
Tmtc1Q3UV71 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30,52■■■□□ 2,48
Tmtc1Q3UV71 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30,49■■■□□ 2,47
Tmtc1Q3UV71 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Tmtc1Q3UV71 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30,4■■■□□ 2,46
Tmtc1Q3UV71 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30,33■■■□□ 2,45
Tmtc1Q3UV71 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30,31■■■□□ 2,44
Tmtc1Q3UV71 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30,3■■■□□ 2,44
Tmtc1Q3UV71 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30,28■■■□□ 2,44
Tmtc1Q3UV71 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30,14■■■□□ 2,41
Tmtc1Q3UV71 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30,13■■■□□ 2,41
Tmtc1Q3UV71 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Tmtc1Q3UV71 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30,1■■■□□ 2,41
Tmtc1Q3UV71 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30,06■■■□□ 2,4
Tmtc1Q3UV71 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30,02■■■□□ 2,4
Tmtc1Q3UV71 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29,92■■■□□ 2,38
Tmtc1Q3UV71 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29,91■■■□□ 2,38
Tmtc1Q3UV71 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29,91■■■□□ 2,38
Tmtc1Q3UV71 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29,89■■■□□ 2,38
Tmtc1Q3UV71 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29,83■■■□□ 2,37
Tmtc1Q3UV71 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,37
Tmtc1Q3UV71 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,36
Tmtc1Q3UV71 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29,81■■■□□ 2,36
Tmtc1Q3UV71 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29,81■■■□□ 2,36
Tmtc1Q3UV71 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29,79■■■□□ 2,36
Tmtc1Q3UV71 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29,77■■■□□ 2,36
Tmtc1Q3UV71 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29,76■■■□□ 2,35
Tmtc1Q3UV71 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29,75■■■□□ 2,35
Tmtc1Q3UV71 Gm27325-201ENSMUST00000175467 74 ntBASIC29,7■■■□□ 2,35
Tmtc1Q3UV71 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29,59■■■□□ 2,33
Tmtc1Q3UV71 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29,59■■■□□ 2,33
Tmtc1Q3UV71 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29,57■■■□□ 2,32
Retrieved 100 of 76,532 protein–RNA pairs in 22,5 ms