Protein–RNA interactions for Protein: Q8R2U7

Lrrc42, Leucine-rich repeat-containing protein 42, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc42Q8R2U7 Gm25239-201ENSMUST00000174915 86 ntBASIC37.87■■■■□ 3.65
Lrrc42Q8R2U7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.86■■■■□ 3.17
Lrrc42Q8R2U7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Lrrc42Q8R2U7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Lrrc42Q8R2U7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Lrrc42Q8R2U7 Gm15042-201ENSMUST00000120212 883 ntBASIC33.39■■■□□ 2.94
Lrrc42Q8R2U7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.24■■■□□ 2.91
Lrrc42Q8R2U7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Lrrc42Q8R2U7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Lrrc42Q8R2U7 Psd-208ENSMUST00000224556 2034 ntBASIC32.82■■■□□ 2.84
Lrrc42Q8R2U7 Gm15045-201ENSMUST00000117359 883 ntBASIC32.67■■■□□ 2.82
Lrrc42Q8R2U7 Gm24109-201ENSMUST00000175489 103 ntBASIC32.66■■■□□ 2.82
Lrrc42Q8R2U7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Lrrc42Q8R2U7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Lrrc42Q8R2U7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Lrrc42Q8R2U7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Lrrc42Q8R2U7 Gm23366-201ENSMUST00000175022 89 ntBASIC31.7■■■□□ 2.67
Lrrc42Q8R2U7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Lrrc42Q8R2U7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.49■■■□□ 2.63
Lrrc42Q8R2U7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Lrrc42Q8R2U7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Lrrc42Q8R2U7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Lrrc42Q8R2U7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Lrrc42Q8R2U7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Lrrc42Q8R2U7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Lrrc42Q8R2U7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Lrrc42Q8R2U7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Lrrc42Q8R2U7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
Lrrc42Q8R2U7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Lrrc42Q8R2U7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Lrrc42Q8R2U7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Lrrc42Q8R2U7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
Lrrc42Q8R2U7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Lrrc42Q8R2U7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
Lrrc42Q8R2U7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Lrrc42Q8R2U7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.77■■■□□ 2.52
Lrrc42Q8R2U7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Lrrc42Q8R2U7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Lrrc42Q8R2U7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.64■■■□□ 2.5
Lrrc42Q8R2U7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Lrrc42Q8R2U7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Lrrc42Q8R2U7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.33■■■□□ 2.45
Lrrc42Q8R2U7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Lrrc42Q8R2U7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.21■■■□□ 2.43
Lrrc42Q8R2U7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Lrrc42Q8R2U7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Lrrc42Q8R2U7 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.06■■■□□ 2.4
Lrrc42Q8R2U7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30■■■□□ 2.39
Lrrc42Q8R2U7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Lrrc42Q8R2U7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Lrrc42Q8R2U7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Lrrc42Q8R2U7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.81■■■□□ 2.36
Lrrc42Q8R2U7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Lrrc42Q8R2U7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Lrrc42Q8R2U7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.79■■■□□ 2.36
Lrrc42Q8R2U7 Gm25238-201ENSMUST00000174914 89 ntBASIC29.78■■■□□ 2.36
Lrrc42Q8R2U7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.76■■■□□ 2.36
Lrrc42Q8R2U7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Lrrc42Q8R2U7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Lrrc42Q8R2U7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Lrrc42Q8R2U7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Lrrc42Q8R2U7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.55■■■□□ 2.32
Lrrc42Q8R2U7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Lrrc42Q8R2U7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Lrrc42Q8R2U7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Lrrc42Q8R2U7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.34■■■□□ 2.29
Lrrc42Q8R2U7 Gm27325-201ENSMUST00000175467 74 ntBASIC29.32■■■□□ 2.28
Lrrc42Q8R2U7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Lrrc42Q8R2U7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
Lrrc42Q8R2U7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.29■■■□□ 2.28
Lrrc42Q8R2U7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Lrrc42Q8R2U7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
Lrrc42Q8R2U7 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.2■■■□□ 2.26
Lrrc42Q8R2U7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
Lrrc42Q8R2U7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Lrrc42Q8R2U7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.1■■■□□ 2.25
Lrrc42Q8R2U7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Lrrc42Q8R2U7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Lrrc42Q8R2U7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Lrrc42Q8R2U7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29■■■□□ 2.23
Lrrc42Q8R2U7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29■■■□□ 2.23
Lrrc42Q8R2U7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Lrrc42Q8R2U7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Lrrc42Q8R2U7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Lrrc42Q8R2U7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.92■■■□□ 2.22
Lrrc42Q8R2U7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Lrrc42Q8R2U7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Lrrc42Q8R2U7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Lrrc42Q8R2U7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Lrrc42Q8R2U7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
Lrrc42Q8R2U7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
Lrrc42Q8R2U7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.77■■■□□ 2.2
Lrrc42Q8R2U7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Lrrc42Q8R2U7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Lrrc42Q8R2U7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
Lrrc42Q8R2U7 Rab21-202ENSMUST00000218831 843 ntBASIC28.62■■■□□ 2.17
Lrrc42Q8R2U7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Lrrc42Q8R2U7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.59■■■□□ 2.17
Lrrc42Q8R2U7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
Lrrc42Q8R2U7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms