RNA–Protein interactions for RNA: snR52

snR52, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR52, Length 92 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR52snR52 IMA5P40884 581 aa1.16□□□□□ -2.22
snR52snR52 RPN11P43588 306 aaKnown RBP1.16□□□□□ -2.22
snR52snR52 MSO1P53604 210 aaKnown RBP1.16□□□□□ -2.22
snR52snR52 PFA5Q03289 374 aa1.16□□□□□ -2.22
snR52snR52 MSS11Q03825 758 aa1.16□□□□□ -2.22
snR52snR52 TSA2Q04120 196 aa1.16□□□□□ -2.22
snR52snR52 YDL218WQ07629 317 aa1.16□□□□□ -2.22
snR52snR52 CDC45Q08032 650 aa1.16□□□□□ -2.22
snR52snR52 HNT3Q08702 217 aa1.16□□□□□ -2.22
snR52snR52 AYT1Q12226 474 aa1.16□□□□□ -2.22
snR52snR52 HRT3Q12347 344 aa1.16□□□□□ -2.22
snR52snR52 RVB2Q12464 471 aaKnown RBP1.16□□□□□ -2.22
snR52snR52 SUP35P05453 685 aaKnown RBP1.15□□□□□ -2.23
snR52snR52 PET111P08468 800 aa1.15□□□□□ -2.23
snR52snR52 COX11P19516 300 aaKnown RBP1.15□□□□□ -2.23
snR52snR52 RNA14P25298 677 aaKnown RBP1.15□□□□□ -2.23
snR52snR52 NAM9P27929 486 aa1.15□□□□□ -2.23
snR52snR52 HEM12P32347 362 aaPredicted RBP1.15□□□□□ -2.23
snR52snR52 STV1P37296 890 aa1.15□□□□□ -2.23
snR52snR52 ATG23Q06671 453 aa1.15□□□□□ -2.23
snR52snR52 YOR387CQ08910 206 aa1.15□□□□□ -2.23
snR52snR52 TMS1Q12116 473 aa1.15□□□□□ -2.23
snR52snR52 NUP145P49687 1317 aa1.15□□□□□ -2.23
snR52snR52 VAS1P07806 1104 aaKnown RBP1.14□□□□□ -2.23
snR52snR52 YML003WP0CF16 290 aa1.14□□□□□ -2.23
snR52snR52 TYR1P20049 452 aa1.14□□□□□ -2.23
snR52snR52 LRE1P25579 583 aaKnown RBP1.14□□□□□ -2.23
snR52snR52 TGL1P34163 548 aa1.14□□□□□ -2.23
snR52snR52 GEX2P36173 615 aa1.14□□□□□ -2.23
snR52snR52 SWD3P38123 315 aa1.14□□□□□ -2.23
snR52snR52 MTC4P38335 694 aaKnown RBP1.14□□□□□ -2.23
snR52snR52 RRP3P38712 501 aaKnown RBP1.14□□□□□ -2.23
snR52snR52 CTK2P46962 323 aa1.14□□□□□ -2.23
snR52snR52 TAM41P53230 385 aa1.14□□□□□ -2.23
snR52snR52 ECM38Q05902 660 aaPredicted RBP1.14□□□□□ -2.23
snR52snR52 PEX15Q08215 383 aa1.14□□□□□ -2.23
snR52snR52 ICL2Q12031 575 aa1.14□□□□□ -2.23
snR52snR52 RBD2Q12270 262 aa1.14□□□□□ -2.23
snR52snR52 ERV2Q12284 196 aa1.14□□□□□ -2.23
snR52snR52 ARP6Q12509 438 aa1.14□□□□□ -2.23
snR52snR52 RPL20AP0CX23 172 aaKnown RBP1.13□□□□□ -2.23
snR52snR52 RPL20BP0CX24 172 aaPredicted RBP1.13□□□□□ -2.23
snR52snR52 RAP1P11938 827 aa1.13□□□□□ -2.23
snR52snR52 RER1P25560 188 aa1.13□□□□□ -2.23
snR52snR52 RFA2P26754 273 aaKnown RBP1.13□□□□□ -2.23
snR52snR52 SIP2P34164 415 aaKnown RBP1.13□□□□□ -2.23
snR52snR52 MIA40P36046 403 aa1.13□□□□□ -2.23
snR52snR52 TAF5P38129 798 aa1.13□□□□□ -2.23
snR52snR52 YIL060WP40519 144 aa1.13□□□□□ -2.23
snR52snR52 DCP2P53550 970 aaKnown RBP1.13□□□□□ -2.23
snR52snR52 ALG12P53730 551 aa1.13□□□□□ -2.23
snR52snR52 FMP45Q07651 309 aa1.13□□□□□ -2.23
snR52snR52 RRG7Q08774 242 aaPredicted RBP1.13□□□□□ -2.23
snR52snR52 FAB1P34756 2278 aa1.13□□□□□ -2.23
snR52snR52 ADH4P10127 382 aa1.12□□□□□ -2.23
snR52snR52 ATR1P13090 542 aa1.12□□□□□ -2.23
snR52snR52 MRC1P25588 1096 aa1.12□□□□□ -2.23
snR52snR52 ECM15P35195 104 aa1.12□□□□□ -2.23
snR52snR52 MRP21P38175 177 aa1.12□□□□□ -2.23
snR52snR52 BMT2P38278 337 aa1.12□□□□□ -2.23
snR52snR52 SCS2P40075 244 aaKnown RBP1.12□□□□□ -2.23
snR52snR52 SLD3P53135 668 aa1.12□□□□□ -2.23
snR52snR52 SOL4P53315 255 aa1.12□□□□□ -2.23
snR52snR52 YNR029CP53729 429 aaKnown RBP1.12□□□□□ -2.23
snR52snR52 YMR087WQ04299 284 aa1.12□□□□□ -2.23
snR52snR52 THI20Q08224 551 aa1.12□□□□□ -2.23
snR52snR52 SLX4Q12098 748 aa1.12□□□□□ -2.23
snR52snR52 BIK1P11709 440 aa1.11□□□□□ -2.23
snR52snR52 PTR2P32901 601 aa1.11□□□□□ -2.23
snR52snR52 PMU1P36069 295 aa1.11□□□□□ -2.23
snR52snR52 AAP1P37898 856 aaKnown RBP1.11□□□□□ -2.23
snR52snR52 SWD1P39706 426 aa1.11□□□□□ -2.23
snR52snR52 SPC105P53148 917 aa1.11□□□□□ -2.23
snR52snR52 YPL108WQ02872 168 aaPredicted RBP1.11□□□□□ -2.23
snR52snR52 CLN3P13365 580 aa1.1□□□□□ -2.23
snR52snR52 PHO3P24031 467 aa1.1□□□□□ -2.23
snR52snR52 MCM4P30665 933 aaKnown RBP1.1□□□□□ -2.23
snR52snR52 TUL1P36096 758 aa1.1□□□□□ -2.23
snR52snR52 REE1P40893 198 aa1.1□□□□□ -2.23
snR52snR52 MOT3P54785 490 aaKnown RBP1.1□□□□□ -2.23
snR52snR52 MTG1Q03151 367 aaPredicted RBP1.1□□□□□ -2.23
snR52snR52 UTP14Q04500 899 aaKnown RBP1.1□□□□□ -2.23
snR52snR52 ADE13Q05911 482 aaKnown RBP1.1□□□□□ -2.23
snR52snR52 SWA2Q06677 668 aa1.1□□□□□ -2.23
snR52snR52 SUL2Q12325 893 aa1.1□□□□□ -2.23
snR52snR52 PUT3P25502 979 aaPredicted RBP1.09□□□□□ -2.23
snR52snR52 SGF29P25554 259 aa1.09□□□□□ -2.23
snR52snR52 ARO2P28777 376 aaKnown RBP1.09□□□□□ -2.23
snR52snR52 NMD2P38798 1089 aaKnown RBP1.09□□□□□ -2.23
snR52snR52 ECM10P39987 644 aa1.09□□□□□ -2.23
snR52snR52 AXL1P40851 1208 aa1.09□□□□□ -2.23
snR52snR52 YGR237CP50089 785 aa1.09□□□□□ -2.23
snR52snR52 SAM50P53969 484 aa1.09□□□□□ -2.23
snR52snR52 ELP3Q02908 557 aaKnown RBP1.09□□□□□ -2.23
snR52snR52 MRPL35Q06678 367 aa1.09□□□□□ -2.23
snR52snR52 ENT4Q07872 247 aa1.09□□□□□ -2.23
snR52snR52 AMD1P15274 810 aaKnown RBP1.08□□□□□ -2.24
snR52snR52 DEG1P31115 442 aaKnown RBP1.08□□□□□ -2.24
snR52snR52 PAD1P33751 242 aaKnown RBP RIP-Chip data1.08□□□□□ -2.24not detected
snR52snR52 LHS1P36016 881 aa1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms