RNA–Protein interactions for RNA: YPL149W

ATG5, Transcript of Conserved protein involved in autophagy and the Cvt pathway, yeast

Gene ATG5, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG5	YPL149W	TAD3	Q9URQ3	322 aa		4.11	□□□□□ -1.75
ATG5	YPL149W	CHO1	P08456	276 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	YMR085W	P0CF18	432 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	RAP1	P11938	827 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	COQ3	P27680	312 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	PDB1	P32473	366 aa	Known RBP	4.1	□□□□□ -1.75
ATG5	YPL149W	OCT1	P35999	772 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	AUR1	P36107	401 aa	Predicted RBP	4.1	□□□□□ -1.75
ATG5	YPL149W	PXL1	P36166	706 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	MNN2	P38069	597 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	AGP2	P38090	596 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	ARN1	P38731	627 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	PKP1	P40530	394 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	NMD5	P46970	1048 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	DPB11	P47027	764 aa	Predicted RBP	4.1	□□□□□ -1.75
ATG5	YPL149W	DIA3	P52290	468 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	MFB1	Q04922	465 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	SDH5	Q08230	162 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	ATG9	Q12142	997 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	INP53	Q12271	1107 aa		4.1	□□□□□ -1.75
ATG5	YPL149W	MRP7	P12687	371 aa		4.09	□□□□□ -1.75
ATG5	YPL149W	PEP3	P27801	918 aa		4.09	□□□□□ -1.75
ATG5	YPL149W	NOP4	P37838	685 aa	Known RBP	4.09	□□□□□ -1.75
ATG5	YPL149W	YBR225W	P38321	900 aa		4.09	□□□□□ -1.75
ATG5	YPL149W	FLC2	P39719	783 aa		4.09	□□□□□ -1.75
ATG5	YPL149W	YJL107C	P42947	387 aa		4.09	□□□□□ -1.75
ATG5	YPL149W	MRX6	P48564	524 aa		4.09	□□□□□ -1.75
ATG5	YPL149W	RBG2	P53295	368 aa	Known RBP	4.09	□□□□□ -1.75
ATG5	YPL149W	IDP3	P53982	420 aa	Known RBP	4.09	□□□□□ -1.75
ATG5	YPL149W	ERG13	P54839	491 aa	Known RBP	4.09	□□□□□ -1.75
ATG5	YPL149W	SEG1	Q04279	960 aa		4.09	□□□□□ -1.75
ATG5	YPL149W	BUD22	Q04347	519 aa	Known RBP	4.09	□□□□□ -1.75
ATG5	YPL149W	COQ11	Q05892	277 aa		4.09	□□□□□ -1.75
ATG5	YPL149W	RCN2	Q12044	265 aa		4.09	□□□□□ -1.75
ATG5	YPL149W	GCN4	P03069	281 aa		4.08	□□□□□ -1.76
ATG5	YPL149W	GAL4	P04386	881 aa		4.08	□□□□□ -1.76
ATG5	YPL149W	ARD1	P07347	238 aa	Predicted RBP	4.08	□□□□□ -1.76
ATG5	YPL149W	YIH1	P25637	258 aa		4.08	□□□□□ -1.76
ATG5	YPL149W	CMK1	P27466	446 aa	Known RBP	4.08	□□□□□ -1.76
ATG5	YPL149W	JNM1	P36224	373 aa		4.08	□□□□□ -1.76
ATG5	YPL149W	DIA4	P38705	446 aa	Predicted RBP	4.08	□□□□□ -1.76
ATG5	YPL149W	YNG2	P38806	282 aa	Known RBP	4.08	□□□□□ -1.76
ATG5	YPL149W	XBP1	P40489	647 aa		4.08	□□□□□ -1.76
ATG5	YPL149W	RPN11	P43588	306 aa	Known RBP	4.08	□□□□□ -1.76
ATG5	YPL149W	GLO1	P50107	326 aa		4.08	□□□□□ -1.76
ATG5	YPL149W	STR3	P53101	465 aa	Known RBP	4.08	□□□□□ -1.76
ATG5	YPL149W	YTP1	P53584	459 aa		4.08	□□□□□ -1.76
ATG5	YPL149W	ARE2	P53629	642 aa	Known RBP	4.08	□□□□□ -1.76
ATG5	YPL149W	ZDS2	P54786	942 aa		4.08	□□□□□ -1.76
ATG5	YPL149W	RPT6	Q01939	405 aa	Known RBP	4.08	□□□□□ -1.76
ATG5	YPL149W	CTI6	Q08923	506 aa		4.08	□□□□□ -1.76
ATG5	YPL149W	SPE4	Q12455	300 aa		4.08	□□□□□ -1.76
ATG5	YPL149W	YAP1	P19880	650 aa	Known RBP	4.07	□□□□□ -1.76
ATG5	YPL149W	TKL1	P23254	680 aa	Known RBP	4.07	□□□□□ -1.76
ATG5	YPL149W	LCB1	P25045	558 aa	Known RBP	4.07	□□□□□ -1.76
ATG5	YPL149W	SNU114	P36048	1008 aa	Known RBP	4.07	□□□□□ -1.76
ATG5	YPL149W	REG2	P38232	338 aa		4.07	□□□□□ -1.76
ATG5	YPL149W	UIP3	P39547	235 aa		4.07	□□□□□ -1.76
ATG5	YPL149W	NOC2	P39744	710 aa	Known RBP	4.07	□□□□□ -1.76
ATG5	YPL149W	TPA1	P40032	644 aa	Known RBP	4.07	□□□□□ -1.76
ATG5	YPL149W	MAF1	P41910	395 aa		4.07	□□□□□ -1.76
ATG5	YPL149W	COP1	P53622	1201 aa	Known RBP	4.07	□□□□□ -1.76
ATG5	YPL149W	VPS75	P53853	264 aa		4.07	□□□□□ -1.76
ATG5	YPL149W	YNL144C	P53907	740 aa		4.07	□□□□□ -1.76
ATG5	YPL149W	TDA9	Q04545	1251 aa		4.07	□□□□□ -1.76
ATG5	YPL149W	PIG1	Q06216	648 aa		4.07	□□□□□ -1.76
ATG5	YPL149W	NMD4	Q12129	218 aa		4.07	□□□□□ -1.76
ATG5	YPL149W	TAH18	Q12181	623 aa		4.07	□□□□□ -1.76
ATG5	YPL149W	CRC1	Q12289	327 aa		4.07	□□□□□ -1.76
ATG5	YPL149W	RRI1	Q12468	440 aa		4.07	□□□□□ -1.76
ATG5	YPL149W	RTP1	Q12751	981 aa		4.07	□□□□□ -1.76
ATG5	YPL149W	CDC31	P06704	161 aa	Known RBP	4.06	□□□□□ -1.76
ATG5	YPL149W	CBS1	P14066	229 aa		4.06	□□□□□ -1.76
ATG5	YPL149W	SPE2	P21182	396 aa		4.06	□□□□□ -1.76
ATG5	YPL149W	STE50	P25344	346 aa		4.06	□□□□□ -1.76
ATG5	YPL149W	ADH7	P25377	361 aa		4.06	□□□□□ -1.76
ATG5	YPL149W	SAC1	P32368	623 aa	Known RBP	4.06	□□□□□ -1.76
ATG5	YPL149W	YKL050C	P35736	922 aa		4.06	□□□□□ -1.76
ATG5	YPL149W	SRO77	P38163	1010 aa		4.06	□□□□□ -1.76
ATG5	YPL149W	FLO5	P38894	1075 aa		4.06	□□□□□ -1.76
ATG5	YPL149W	NPR2	P39923	615 aa		4.06	□□□□□ -1.76
ATG5	YPL149W	ULP2	P40537	1034 aa	Predicted RBP	4.06	□□□□□ -1.76
ATG5	YPL149W	YIL024C	P40543	189 aa		4.06	□□□□□ -1.76
ATG5	YPL149W	MAK10	Q02197	733 aa		4.06	□□□□□ -1.76
ATG5	YPL149W	DPB4	Q04603	196 aa	Known RBP	4.06	□□□□□ -1.76
ATG5	YPL149W	FRE3	Q08905	711 aa		4.06	□□□□□ -1.76
ATG5	YPL149W	APL4	Q12028	832 aa		4.06	□□□□□ -1.76
ATG5	YPL149W	CNA1	P23287	553 aa		4.05	□□□□□ -1.76
ATG5	YPL149W	RFC1	P38630	861 aa	Known RBP	4.05	□□□□□ -1.76
ATG5	YPL149W	PSA1	P41940	361 aa	Known RBP	4.05	□□□□□ -1.76
ATG5	YPL149W	SMC3	P47037	1230 aa		4.05	□□□□□ -1.76
ATG5	YPL149W	IRC8	P47046	822 aa		4.05	□□□□□ -1.76
ATG5	YPL149W	UBP8	P50102	471 aa		4.05	□□□□□ -1.76
ATG5	YPL149W	YMR178W	Q03219	274 aa	Known RBP	4.05	□□□□□ -1.76
ATG5	YPL149W	ECM22	Q05958	814 aa	Predicted RBP	4.05	□□□□□ -1.76
ATG5	YPL149W	LUC7	Q07508	261 aa	Predicted RBP	4.05	□□□□□ -1.76
ATG5	YPL149W	BUD7	Q08754	746 aa		4.05	□□□□□ -1.76
ATG5	YPL149W	SGS1	P35187	1447 aa		4.04	□□□□□ -1.76
ATG5	YPL149W	MF(ALPHA)1	P01149	165 aa		4.04	□□□□□ -1.76
ATG5	YPL149W	ARG3	P05150	338 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms