RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W COP1P53622 1201 aaKnown RBP3.65□□□□□ -1.82
MSD1YPL104W YNL144CP53907 740 aa3.65□□□□□ -1.82
MSD1YPL104W TEP1P53916 434 aa3.65□□□□□ -1.82
MSD1YPL104W CEG1Q01159 459 aaPredicted RBP3.65□□□□□ -1.82
MSD1YPL104W SLU7Q02775 382 aaKnown RBP3.65□□□□□ -1.82
MSD1YPL104W HAS1Q03532 505 aaKnown RBP3.65□□□□□ -1.82
MSD1YPL104W ENT5Q03769 411 aaKnown RBP3.65□□□□□ -1.82
MSD1YPL104W ECM22Q05958 814 aaPredicted RBP3.65□□□□□ -1.82
MSD1YPL104W MRI1Q06489 411 aaKnown RBP3.65□□□□□ -1.82
MSD1YPL104W CMS1Q07897 291 aaKnown RBP3.65□□□□□ -1.82
MSD1YPL104W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
MSD1YPL104W SVS1Q12254 260 aa3.65□□□□□ -1.82
MSD1YPL104W ADE8P04161 214 aa3.65□□□□□ -1.83
MSD1YPL104W ADY2P25613 283 aa3.65□□□□□ -1.83
MSD1YPL104W NDI1P32340 513 aa3.65□□□□□ -1.83
MSD1YPL104W SMI1P32566 505 aa3.65□□□□□ -1.83
MSD1YPL104W MRE11P32829 692 aa3.65□□□□□ -1.83
MSD1YPL104W GCS1P35197 352 aa3.65□□□□□ -1.83
MSD1YPL104W YKR051WP36142 418 aa3.65□□□□□ -1.83
MSD1YPL104W HSM3P38348 480 aa3.65□□□□□ -1.83
MSD1YPL104W SSP120P39931 234 aaKnown RBP3.65□□□□□ -1.83
MSD1YPL104W YJL107CP42947 387 aa3.65□□□□□ -1.83
MSD1YPL104W YFL012WP43580 148 aa3.65□□□□□ -1.83
MSD1YPL104W RTT101P47050 842 aa3.65□□□□□ -1.83
MSD1YPL104W TMA22P47089 198 aaPredicted RBP3.65□□□□□ -1.83
MSD1YPL104W NRD1P53617 575 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
MSD1YPL104W HEH2Q03281 663 aa3.65□□□□□ -1.83
MSD1YPL104W BUD22Q04347 519 aaKnown RBP3.65□□□□□ -1.83
MSD1YPL104W ENT2Q05785 613 aa3.65□□□□□ -1.83
MSD1YPL104W LCB5Q06147 687 aaKnown RBP3.65□□□□□ -1.83
MSD1YPL104W SLP1Q12232 587 aa3.65□□□□□ -1.83
MSD1YPL104W LCB4Q12246 624 aa3.65□□□□□ -1.83
MSD1YPL104W SPE4Q12455 300 aa3.65□□□□□ -1.83
MSD1YPL104W PRC1P00729 532 aa3.64□□□□□ -1.83
MSD1YPL104W RPP1AP05318 106 aaPredicted RBP3.64□□□□□ -1.83
MSD1YPL104W PMR1P13586 950 aa3.64□□□□□ -1.83
MSD1YPL104W PRP4P20053 465 aaKnown RBP3.64□□□□□ -1.83
MSD1YPL104W NFS1P25374 497 aa3.64□□□□□ -1.83
MSD1YPL104W PGS1P25578 521 aa3.64□□□□□ -1.83
MSD1YPL104W YCL068CP25593 260 aa3.64□□□□□ -1.83
MSD1YPL104W RIM1P32445 135 aaKnown RBP3.64□□□□□ -1.83
MSD1YPL104W MRS6P32864 603 aaKnown RBP3.64□□□□□ -1.83
MSD1YPL104W CYM1P32898 989 aa3.64□□□□□ -1.83
MSD1YPL104W COY1P34237 679 aa3.64□□□□□ -1.83
MSD1YPL104W TSA1P34760 196 aaKnown RBP3.64□□□□□ -1.83
MSD1YPL104W WHI3P34761 661 aaKnown RBP3.64□□□□□ -1.83
MSD1YPL104W RFS1P38234 210 aaKnown RBP3.64□□□□□ -1.83
MSD1YPL104W YBR225WP38321 900 aa3.64□□□□□ -1.83
MSD1YPL104W YBR238CP38330 731 aaKnown RBP3.64□□□□□ -1.83
MSD1YPL104W YJL206CP39529 758 aa3.64□□□□□ -1.83
MSD1YPL104W OAF1P39720 1047 aaPredicted RBP3.64□□□□□ -1.83
MSD1YPL104W SIT1P39980 628 aa3.64□□□□□ -1.83
MSD1YPL104W PFK26P40433 827 aaKnown RBP3.64□□□□□ -1.83
MSD1YPL104W ROK1P45818 564 aaPredicted RBP3.64□□□□□ -1.83
MSD1YPL104W MRX6P48564 524 aa3.64□□□□□ -1.83
MSD1YPL104W PAN2P53010 1115 aaPredicted RBP3.64□□□□□ -1.83
MSD1YPL104W TAN1P53072 289 aaPredicted RBP3.64□□□□□ -1.83
MSD1YPL104W RCF2P53721 224 aa3.64□□□□□ -1.83
MSD1YPL104W GCN5Q03330 439 aa3.64□□□□□ -1.83
MSD1YPL104W HER2Q03557 464 aa3.64□□□□□ -1.83
MSD1YPL104W INP2Q03824 705 aa3.64□□□□□ -1.83
MSD1YPL104W ARP9Q05123 467 aa3.64□□□□□ -1.83
MSD1YPL104W YDR338CQ05497 695 aa3.64□□□□□ -1.83
MSD1YPL104W CDC123Q05791 360 aa3.64□□□□□ -1.83
MSD1YPL104W YSH1Q06224 779 aaPredicted RBP3.64□□□□□ -1.83
MSD1YPL104W YIG1Q08956 461 aa3.64□□□□□ -1.83
MSD1YPL104W LDB17Q12342 491 aa3.64□□□□□ -1.83
MSD1YPL104W KCS1Q12494 1050 aa3.64□□□□□ -1.83
MSD1YPL104W RNA1P11745 407 aaKnown RBP3.63□□□□□ -1.83
MSD1YPL104W APE1P14904 514 aa3.63□□□□□ -1.83
MSD1YPL104W ARG1P22768 420 aa3.63□□□□□ -1.83
MSD1YPL104W DBP2P24783 546 aaKnown RBP3.63□□□□□ -1.83
MSD1YPL104W DAL3P32459 195 aa3.63□□□□□ -1.83
MSD1YPL104W NIC96P34077 839 aa3.63□□□□□ -1.83
MSD1YPL104W URA8P38627 578 aaPredicted RBP3.63□□□□□ -1.83
MSD1YPL104W MSC7P38694 644 aa3.63□□□□□ -1.83
MSD1YPL104W TOK1P40310 691 aa3.63□□□□□ -1.83
MSD1YPL104W PEP8P40335 379 aa3.63□□□□□ -1.83
MSD1YPL104W GYP8P43570 497 aa3.63□□□□□ -1.83
MSD1YPL104W SNG1P46950 547 aa3.63□□□□□ -1.83
MSD1YPL104W AIM14P53109 570 aa3.63□□□□□ -1.83
MSD1YPL104W YNL058CP53947 316 aa3.63□□□□□ -1.83
MSD1YPL104W PNG1Q02890 363 aa3.63□□□□□ -1.83
MSD1YPL104W PIR3Q03180 325 aa3.63□□□□□ -1.83
MSD1YPL104W RLI1Q03195 608 aaKnown RBP3.63□□□□□ -1.83
MSD1YPL104W TAF11Q04226 346 aa3.63□□□□□ -1.83
MSD1YPL104W ADY3Q07732 790 aa3.63□□□□□ -1.83
MSD1YPL104W YTM1Q12024 460 aaPredicted RBP3.63□□□□□ -1.83
MSD1YPL104W AFI1Q99222 893 aa3.63□□□□□ -1.83
MSD1YPL104W YPT6Q99260 215 aa3.63□□□□□ -1.83
MSD1YPL104W RAS1P01119 309 aa3.63□□□□□ -1.83
MSD1YPL104W ERG20P08524 352 aaKnown RBP3.63□□□□□ -1.83
MSD1YPL104W YMR085WP0CF18 432 aa3.63□□□□□ -1.83
MSD1YPL104W GCY1P14065 312 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
MSD1YPL104W AMD2P22580 549 aa3.63□□□□□ -1.83
MSD1YPL104W RPC19P28000 142 aaKnown RBP3.63□□□□□ -1.83
MSD1YPL104W PTP2P29461 750 aa3.63□□□□□ -1.83
MSD1YPL104W RAD16P31244 790 aa3.63□□□□□ -1.83
MSD1YPL104W TOA1P32773 286 aa3.63□□□□□ -1.83
MSD1YPL104W SRP101P32916 621 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms