RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABP140	YOR239W	AVL9	Q12500	764 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	TY1B-NL2	Q99337	1749 aa	Known RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	RPP1A	P05318	106 aa	Predicted RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	ADE5,7	P07244	802 aa	Known RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	CDC6	P09119	513 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	KGD1	P20967	1014 aa	Known RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	ASF2	P32448	525 aa	Predicted RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	RRN6	P32786	894 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	PPQ1	P32945	549 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	GDH2	P33327	1092 aa	Known RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	IXR1	P33417	597 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	SIP2	P34164	415 aa	Known RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	RXT2	P38255	430 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	COS111	P38308	924 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	YMR262W	P38430	313 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	MMS21	P38632	267 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	SSO2	P39926	295 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	NOP16	P40007	231 aa	Known RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	SOK1	P40317	901 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	YJR061W	P40355	935 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	UTP25	P40498	721 aa	Known RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	SAD1	P43589	448 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	LIA1	P47120	325 aa	Known RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	PRP24	P49960	444 aa	Known RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	ROM1	P53046	1155 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	COG1	P53079	417 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	SLI1	P53304	468 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	RET3	P53600	189 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	MNT4	P53745	580 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	SKI8	Q02793	397 aa	Predicted RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	KAP120	Q02932	1032 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	VHS1	Q03785	461 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	SEG1	Q04279	960 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	PUS5	Q06244	254 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	ASA1	Q06822	443 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	IWR1	Q07532	353 aa	Predicted RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	NGL1	Q08213	363 aa	Known RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	DIA2	Q08496	732 aa	Predicted RBP	3.77	□□□□□ -1.81
ABP140	YOR239W	MUM3	Q08750	479 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	FLC1	Q08967	793 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	ACM1	Q08981	209 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	YOR342C	Q12182	319 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	DGK1	Q12382	290 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	DCN1	Q12395	269 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	GRX6	Q12438	231 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	YCL001W-B	Q96VH2	84 aa		3.77	□□□□□ -1.81
ABP140	YOR239W	CBP2	P03874	630 aa	Predicted RBP	3.76	□□□□□ -1.81
ABP140	YOR239W	RPL25	P04456	142 aa	Known RBP	3.76	□□□□□ -1.81
ABP140	YOR239W	THS1	P04801	734 aa	Known RBP	3.76	□□□□□ -1.81
ABP140	YOR239W	NSP1	P14907	823 aa	Known RBP	3.76	□□□□□ -1.81
ABP140	YOR239W	HEM15	P16622	393 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	GRX2	P17695	143 aa	Known RBP	3.76	□□□□□ -1.81
ABP140	YOR239W	VMA16	P23968	213 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	RAD14	P28519	371 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	PTP2	P29461	750 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	SEC1	P30619	724 aa	Known RBP	3.76	□□□□□ -1.81
ABP140	YOR239W	PET309	P32522	965 aa	Predicted RBP	3.76	□□□□□ -1.81
ABP140	YOR239W	TOM20	P35180	183 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	ABZ1	P37254	787 aa	Predicted RBP	3.76	□□□□□ -1.81
ABP140	YOR239W	MCM7	P38132	845 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	DUG2	P38149	878 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
ABP140	YOR239W	PRS2	P38620	318 aa	Known RBP	3.76	□□□□□ -1.81
ABP140	YOR239W	SOH1	P38633	127 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	YHR078W	P38799	552 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	EXO1	P39875	702 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	DSE1	P40077	573 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	CSM2	P40465	213 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	ALA1	P40825	983 aa	Known RBP	3.76	□□□□□ -1.81
ABP140	YOR239W	VTC4	P47075	721 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	COX16	P47081	118 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	YJR141W	P47172	347 aa	Predicted RBP	3.76	□□□□□ -1.81
ABP140	YOR239W	RSC9	Q03124	581 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	SCS7	Q03529	384 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	CAB1	Q04430	367 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	BUR2	Q05949	395 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	IRC3	Q06683	689 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	YPR091C	Q06833	770 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	SPO75	Q07798	868 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	GSH2	Q08220	491 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	YOL075C	Q08234	1294 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	YNG1	Q08465	219 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	AEP3	Q12089	606 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	TY3A-G	Q12173	290 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	PTC5	Q12511	572 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	ADF1	Q2V2Q1	113 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	TY3A-I	Q99219	290 aa		3.76	□□□□□ -1.81
ABP140	YOR239W	ARG3	P05150	338 aa		3.75	□□□□□ -1.81
ABP140	YOR239W	SNF4	P12904	322 aa		3.75	□□□□□ -1.81
ABP140	YOR239W	GAL2	P13181	574 aa		3.75	□□□□□ -1.81
ABP140	YOR239W	ABF1	P14164	731 aa		3.75	□□□□□ -1.81
ABP140	YOR239W	SPO16	P17122	198 aa		3.75	□□□□□ -1.81
ABP140	YOR239W	SAR1	P20606	190 aa	Known RBP	3.75	□□□□□ -1.81
ABP140	YOR239W	VPS34	P22543	875 aa		3.75	□□□□□ -1.81
ABP140	YOR239W	SAC1	P32368	623 aa	Known RBP	3.75	□□□□□ -1.81
ABP140	YOR239W	LYP1	P32487	611 aa		3.75	□□□□□ -1.81
ABP140	YOR239W	CDC13	P32797	924 aa	Known RBP	3.75	□□□□□ -1.81
ABP140	YOR239W	MRT4	P33201	236 aa	Known RBP	3.75	□□□□□ -1.81
ABP140	YOR239W	CAF4	P36130	643 aa		3.75	□□□□□ -1.81
ABP140	YOR239W	STB5	P38699	743 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms