RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W GCN4P03069 281 aa2.8□□□□□ -1.96
PEP12YOR036W SES1P07284 462 aaKnown RBP2.8□□□□□ -1.96
PEP12YOR036W PCT1P13259 424 aa2.8□□□□□ -1.96
PEP12YOR036W KAR3P17119 729 aa2.8□□□□□ -1.96
PEP12YOR036W PRE8P23639 250 aa2.8□□□□□ -1.96
PEP12YOR036W RRP43P25359 394 aaPredicted RBP2.8□□□□□ -1.96
PEP12YOR036W SIP1P32578 815 aa2.8□□□□□ -1.96
PEP12YOR036W NPL6P32832 435 aa2.8□□□□□ -1.96
PEP12YOR036W VBA2P38358 474 aaKnown RBP2.8□□□□□ -1.96
PEP12YOR036W FUN12P39730 1002 aaKnown RBP2.8□□□□□ -1.96
PEP12YOR036W NPR2P39923 615 aa2.8□□□□□ -1.96
PEP12YOR036W SAP1P39955 897 aaKnown RBP2.8□□□□□ -1.96
PEP12YOR036W IME4P41833 600 aa2.8□□□□□ -1.96
PEP12YOR036W RPN11P43588 306 aaKnown RBP2.8□□□□□ -1.96
PEP12YOR036W INA17Q02888 182 aa2.8□□□□□ -1.96
PEP12YOR036W SPC19Q03954 165 aa2.8□□□□□ -1.96
PEP12YOR036W RAD30Q04049 632 aa2.8□□□□□ -1.96
PEP12YOR036W TAF11Q04226 346 aa2.8□□□□□ -1.96
PEP12YOR036W RAD33Q04231 177 aa2.8□□□□□ -1.96
PEP12YOR036W PLM2Q04383 521 aa2.8□□□□□ -1.96
PEP12YOR036W YML053CQ04978 212 aa2.8□□□□□ -1.96
PEP12YOR036W CYK3Q07533 885 aa2.8□□□□□ -1.96
PEP12YOR036W GPN2Q08726 347 aaPredicted RBP2.8□□□□□ -1.96
PEP12YOR036W HUA2Q12134 243 aa2.8□□□□□ -1.96
PEP12YOR036W TAH18Q12181 623 aa2.8□□□□□ -1.96
PEP12YOR036W SCM3Q12334 223 aa2.8□□□□□ -1.96
PEP12YOR036W COX1P00401 534 aa2.79□□□□□ -1.96
PEP12YOR036W SEC53P07283 254 aaKnown RBP2.79□□□□□ -1.96
PEP12YOR036W SUI3P09064 285 aaKnown RBP2.79□□□□□ -1.96
PEP12YOR036W SRP54P20424 541 aaKnown RBP2.79□□□□□ -1.96
PEP12YOR036W LAC1P28496 418 aa2.79□□□□□ -1.96
PEP12YOR036W PDB1P32473 366 aaKnown RBP2.79□□□□□ -1.96
PEP12YOR036W KES1P35844 434 aaKnown RBP2.79□□□□□ -1.96
PEP12YOR036W NTR2P36118 322 aaPredicted RBP2.79□□□□□ -1.96
PEP12YOR036W AAP1P37898 856 aaKnown RBP2.79□□□□□ -1.96
PEP12YOR036W YNG2P38806 282 aaKnown RBP2.79□□□□□ -1.96
PEP12YOR036W MTG2P38860 518 aa2.79□□□□□ -1.96
PEP12YOR036W UTP9P38882 575 aaKnown RBP2.79□□□□□ -1.96
PEP12YOR036W SEC24P40482 926 aaKnown RBP2.79□□□□□ -1.96
PEP12YOR036W SWP82P43554 623 aa2.79□□□□□ -1.96
PEP12YOR036W YGL260WP53056 76 aa2.79□□□□□ -1.96
PEP12YOR036W DCP2P53550 970 aaKnown RBP2.79□□□□□ -1.96
PEP12YOR036W VPS75P53853 264 aa2.79□□□□□ -1.96
PEP12YOR036W MRPL19P53875 158 aa2.79□□□□□ -1.96
PEP12YOR036W YAT1P80235 687 aa2.79□□□□□ -1.96
PEP12YOR036W NGL3Q03210 505 aa2.79□□□□□ -1.96
PEP12YOR036W MFB1Q04922 465 aa2.79□□□□□ -1.96
PEP12YOR036W CTI6Q08923 506 aa2.79□□□□□ -1.96
PEP12YOR036W YPL272CQ08984 517 aa2.79□□□□□ -1.96
PEP12YOR036W AHA1Q12449 350 aaKnown RBP2.79□□□□□ -1.96
PEP12YOR036W YOR019WQ99248 730 aa2.79□□□□□ -1.96
PEP12YOR036W YBR085C-AO43137 85 aa2.78□□□□□ -1.96
PEP12YOR036W BI2P03873 423 aa2.78□□□□□ -1.96
PEP12YOR036W GAL4P04386 881 aa2.78□□□□□ -1.96
PEP12YOR036W YCK1P23291 538 aa2.78□□□□□ -1.96
PEP12YOR036W CDC15P27636 974 aa2.78□□□□□ -1.96
PEP12YOR036W YBL029WP38201 376 aa2.78□□□□□ -1.96
PEP12YOR036W IMD2P38697 523 aaKnown RBP2.78□□□□□ -1.96
PEP12YOR036W RTS1P38903 757 aa2.78□□□□□ -1.96
PEP12YOR036W SEC31P38968 1273 aaKnown RBP2.78□□□□□ -1.96
PEP12YOR036W TPA1P40032 644 aaKnown RBP2.78□□□□□ -1.96
PEP12YOR036W TES1P41903 349 aaKnown RBP2.78□□□□□ -1.96
PEP12YOR036W VTC2P43585 828 aa2.78□□□□□ -1.96
PEP12YOR036W UBX6P47049 396 aa2.78□□□□□ -1.96
PEP12YOR036W MRX6P48564 524 aa2.78□□□□□ -1.96
PEP12YOR036W IMD3P50095 523 aaKnown RBP2.78□□□□□ -1.96
PEP12YOR036W DSD1P53095 428 aa2.78□□□□□ -1.96
PEP12YOR036W BOP3P53958 396 aa2.78□□□□□ -1.96
PEP12YOR036W ADE16P54113 591 aaKnown RBP2.78□□□□□ -1.96
PEP12YOR036W AAT1Q01802 451 aa2.78□□□□□ -1.96
PEP12YOR036W FCP1Q03254 732 aa2.78□□□□□ -1.96
PEP12YOR036W SKG3Q06315 1026 aa2.78□□□□□ -1.96
PEP12YOR036W CRN1Q06440 651 aa2.78□□□□□ -1.96
PEP12YOR036W RAD34Q06665 692 aa2.78□□□□□ -1.96
PEP12YOR036W SWA2Q06677 668 aa2.78□□□□□ -1.96
PEP12YOR036W RCN2Q12044 265 aa2.78□□□□□ -1.96
PEP12YOR036W ERP4Q12450 207 aa2.78□□□□□ -1.96
PEP12YOR036W OCA4P25366 362 aa2.77□□□□□ -1.97
PEP12YOR036W PGS1P25578 521 aa2.77□□□□□ -1.97
PEP12YOR036W KTR3P38130 404 aaPredicted RBP2.77□□□□□ -1.97
PEP12YOR036W UBP13P38187 747 aa2.77□□□□□ -1.97
PEP12YOR036W ARC40P38328 384 aaKnown RBP2.77□□□□□ -1.97
PEP12YOR036W CCT6P39079 546 aa2.77□□□□□ -1.97
PEP12YOR036W ARF3P40994 183 aaRIP-Chip data2.77□□□□□ -1.97not detected
PEP12YOR036W CIR1P42940 261 aa2.77□□□□□ -1.97
PEP12YOR036W YGL036WP53185 909 aaPredicted RBP2.77□□□□□ -1.97
PEP12YOR036W YDR109CQ04585 715 aa2.77□□□□□ -1.97
PEP12YOR036W YLR287CQ05881 355 aa2.77□□□□□ -1.97
PEP12YOR036W GRS2Q06817 618 aa2.77□□□□□ -1.97
PEP12YOR036W DSE3Q08729 430 aa2.77□□□□□ -1.97
PEP12YOR036W ATX2Q12067 313 aa2.77□□□□□ -1.97
PEP12YOR036W UBX3Q12229 455 aa2.77□□□□□ -1.97
PEP12YOR036W PGA3Q12746 312 aaKnown RBP2.77□□□□□ -1.97
PEP12YOR036W HSH49Q99181 213 aaPredicted RBP2.77□□□□□ -1.97
PEP12YOR036W ARG3P05150 338 aa2.76□□□□□ -1.97
PEP12YOR036W CKA1P15790 372 aa2.76□□□□□ -1.97
PEP12YOR036W PWP1P21304 576 aaKnown RBP2.76□□□□□ -1.97
PEP12YOR036W MAK32P23060 363 aa2.76□□□□□ -1.97
PEP12YOR036W ROX1P25042 368 aa2.76□□□□□ -1.97
PEP12YOR036W ERG3P32353 365 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms