RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W CTK2P46962 323 aa3.87□□□□□ -1.79
TRM112YNR046W ORC5P50874 479 aa3.87□□□□□ -1.79
TRM112YNR046W DIA3P52290 468 aa3.87□□□□□ -1.79
TRM112YNR046W YGR066CP53242 292 aa3.87□□□□□ -1.79
TRM112YNR046W YPL071CQ02864 156 aa3.87□□□□□ -1.79
TRM112YNR046W NGL3Q03210 505 aa3.87□□□□□ -1.79
TRM112YNR046W YML037CQ03703 340 aa3.87□□□□□ -1.79
TRM112YNR046W IRC3Q06683 689 aa3.87□□□□□ -1.79
TRM112YNR046W YEH1Q07804 573 aa3.87□□□□□ -1.79
TRM112YNR046W YLR049CQ12110 428 aa3.87□□□□□ -1.79
TRM112YNR046W SFI1Q12369 946 aa3.87□□□□□ -1.79
TRM112YNR046W TUB1P09733 447 aaKnown RBP3.86□□□□□ -1.79
TRM112YNR046W FUR1P18562 216 aaKnown RBP3.86□□□□□ -1.79
TRM112YNR046W NPL6P32832 435 aa3.86□□□□□ -1.79
TRM112YNR046W YKL050CP35736 922 aa3.86□□□□□ -1.79
TRM112YNR046W LYS4P49367 693 aaPredicted RBP3.86□□□□□ -1.79
TRM112YNR046W YPR003CP53394 754 aa3.86□□□□□ -1.79
TRM112YNR046W SYF1Q04048 859 aaPredicted RBP3.86□□□□□ -1.79
TRM112YNR046W TAF11Q04226 346 aa3.86□□□□□ -1.79
TRM112YNR046W BSP1Q06604 576 aa3.86□□□□□ -1.79
TRM112YNR046W APL4Q12028 832 aa3.86□□□□□ -1.79
TRM112YNR046W INP53Q12271 1107 aa3.86□□□□□ -1.79
TRM112YNR046W PET111P08468 800 aa3.85□□□□□ -1.79
TRM112YNR046W RED1P14291 827 aa3.85□□□□□ -1.79
TRM112YNR046W LCB1P25045 558 aaKnown RBP3.85□□□□□ -1.79
TRM112YNR046W ORC2P32833 620 aa3.85□□□□□ -1.79
TRM112YNR046W IMD2P38697 523 aaKnown RBP3.85□□□□□ -1.79
TRM112YNR046W SPO22P40511 975 aa3.85□□□□□ -1.79
TRM112YNR046W TAX4P47030 604 aa3.85□□□□□ -1.79
TRM112YNR046W IRC8P47046 822 aa3.85□□□□□ -1.79
TRM112YNR046W RPS7BP48164 190 aaKnown RBP3.85□□□□□ -1.79
TRM112YNR046W IMD3P50095 523 aaKnown RBP3.85□□□□□ -1.79
TRM112YNR046W VID30P53076 958 aa3.85□□□□□ -1.79
TRM112YNR046W NNF2P53253 936 aa3.85□□□□□ -1.79
TRM112YNR046W ZDS2P54786 942 aa3.85□□□□□ -1.79
TRM112YNR046W UTP21Q06078 939 aaPredicted RBP3.85□□□□□ -1.79
TRM112YNR046W ORM2Q06144 216 aa3.85□□□□□ -1.79
TRM112YNR046W TPO3Q06451 622 aa3.85□□□□□ -1.79
TRM112YNR046W CIR2Q08822 631 aa3.85□□□□□ -1.79
TRM112YNR046W FMP40Q08968 688 aaPredicted RBP3.85□□□□□ -1.79
TRM112YNR046W RRG1Q12167 365 aaPredicted RBP3.85□□□□□ -1.79
TRM112YNR046W ERP4Q12450 207 aa3.85□□□□□ -1.79
TRM112YNR046W SPE4Q12455 300 aa3.85□□□□□ -1.79
TRM112YNR046W YPT6Q99260 215 aa3.85□□□□□ -1.79
TRM112YNR046W MF(ALPHA)1P01149 165 aa3.84□□□□□ -1.79
TRM112YNR046W MET17P06106 444 aa3.84□□□□□ -1.79
TRM112YNR046W ARD1P07347 238 aaPredicted RBP3.84□□□□□ -1.79
TRM112YNR046W DFR1P07807 211 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
TRM112YNR046W HOT13P36078 116 aa3.84□□□□□ -1.79
TRM112YNR046W MUM2P38236 366 aa3.84□□□□□ -1.79
TRM112YNR046W RIX1P38883 763 aaPredicted RBP3.84□□□□□ -1.79
TRM112YNR046W CIN1P40987 1014 aa3.84□□□□□ -1.79
TRM112YNR046W YFR020WP43600 232 aa3.84□□□□□ -1.79
TRM112YNR046W FAR3P46671 204 aa3.84□□□□□ -1.79
TRM112YNR046W LCL3P53153 274 aa3.84□□□□□ -1.79
TRM112YNR046W YGR127WP53275 312 aa3.84□□□□□ -1.79
TRM112YNR046W ATP23P53722 227 aa3.84□□□□□ -1.79
TRM112YNR046W PFA5Q03289 374 aa3.84□□□□□ -1.79
TRM112YNR046W SNU56Q03782 492 aaKnown RBP3.84□□□□□ -1.79
TRM112YNR046W PDR8Q06149 701 aa3.84□□□□□ -1.79
TRM112YNR046W LUC7Q07508 261 aaPredicted RBP3.84□□□□□ -1.79
TRM112YNR046W LEU9Q12166 604 aaKnown RBP3.84□□□□□ -1.79
TRM112YNR046W RAP1P11938 827 aa3.83□□□□□ -1.8
TRM112YNR046W YCR006CP25350 157 aa3.83□□□□□ -1.8
TRM112YNR046W OCT1P35999 772 aa3.83□□□□□ -1.8
TRM112YNR046W SNU114P36048 1008 aaKnown RBP3.83□□□□□ -1.8
TRM112YNR046W ARN1P38731 627 aa3.83□□□□□ -1.8
TRM112YNR046W ERV46P39727 415 aa3.83□□□□□ -1.8
TRM112YNR046W TPA1P40032 644 aaKnown RBP3.83□□□□□ -1.8
TRM112YNR046W PTR3P43606 678 aa3.83□□□□□ -1.8
TRM112YNR046W IRC7P43623 340 aa3.83□□□□□ -1.8
TRM112YNR046W BPL1P48445 690 aaPredicted RBP3.83□□□□□ -1.8
TRM112YNR046W VPS38Q05919 439 aa3.83□□□□□ -1.8
TRM112YNR046W YLR455WQ06188 304 aa3.83□□□□□ -1.8
TRM112YNR046W MCH4Q08268 501 aa3.83□□□□□ -1.8
TRM112YNR046W YPL272CQ08984 517 aa3.83□□□□□ -1.8
TRM112YNR046W URE2P23202 354 aaKnown RBP3.82□□□□□ -1.8
TRM112YNR046W TKL1P23254 680 aaKnown RBP3.82□□□□□ -1.8
TRM112YNR046W ROX1P25042 368 aa3.82□□□□□ -1.8
TRM112YNR046W SAC1P32368 623 aaKnown RBP3.82□□□□□ -1.8
TRM112YNR046W SSE2P32590 693 aaKnown RBP3.82□□□□□ -1.8
TRM112YNR046W UBP11P36026 717 aa3.82□□□□□ -1.8
TRM112YNR046W SRO77P38163 1010 aa3.82□□□□□ -1.8
TRM112YNR046W ELO1P39540 310 aa3.82□□□□□ -1.8
TRM112YNR046W MET28P40573 187 aa3.82□□□□□ -1.8
TRM112YNR046W CDC1P40986 491 aa3.82□□□□□ -1.8
TRM112YNR046W ROK1P45818 564 aaPredicted RBP3.82□□□□□ -1.8
TRM112YNR046W UBP8P50102 471 aa3.82□□□□□ -1.8
TRM112YNR046W EFM6P53970 246 aa3.82□□□□□ -1.8
TRM112YNR046W MAK10Q02197 733 aa3.82□□□□□ -1.8
TRM112YNR046W YMR178WQ03219 274 aaKnown RBP3.82□□□□□ -1.8
TRM112YNR046W ETT1Q08421 412 aaKnown RBP3.82□□□□□ -1.8
TRM112YNR046W ATG9Q12142 997 aa3.82□□□□□ -1.8
TRM112YNR046W AVL9Q12500 764 aa3.82□□□□□ -1.8
TRM112YNR046W HOM2P13663 365 aaKnown RBP3.81□□□□□ -1.8
TRM112YNR046W KRS1P15180 591 aaKnown RBP3.81□□□□□ -1.8
TRM112YNR046W YBR144CP34215 104 aa3.81□□□□□ -1.8
TRM112YNR046W SEF1P34228 1148 aa3.81□□□□□ -1.8
TRM112YNR046W ICS2P38284 255 aa3.81□□□□□ -1.8
TRM112YNR046W CCT6P39079 546 aa3.81□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms